Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3568.t1
Gene name
Locationscaffold_06:121542..123000
Strand-
Gene length (bp)1458
Transcript length (bp)1458
Coding sequence length (bp)1458
Protein length (aa) 486

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13344 Hydrolase_6 Haloacid dehalogenase-like hydrolase 1.0E-20 133 238
PF13242 Hydrolase_like HAD-hyrolase-like 2.8E-20 365 451

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3568.t1
MSRVEDSDLAVDLAEQDPRAQDPQGALSPRDQRASSGLAIPSAGGNTVEIPATRSAISDAAQFMHNLSLSPSMRD
RRGSRNSFGTSLPIPRSPRMSRLSSVQRGAPSVSRDILASQVQDINKELTTKAKNMAFAFDIDGVLAHGNHAIDE
AKVVLKILNGDNELGIRIPHILLTNGGGKTEEARCAQLTEILEQPISTDQFIQSHTPMQALAEYYQTVLVLGGEG
FKIREVAENYGFKTVVHPKDLLAWDPSISPWATLTEAEKAEAKPRDFSKMKFDAIMVFADSRDYQTDIQVIMDLL
LAEDGMIGTKAKDPVATRIPIYFSQGDLLMPTEHKGLPRLTQGAFRIAIEAQYKTLTGVDLERVVYGKPERATYT
YADEVLKAWMEELHGVSRLPDNVYMIGDNPASDIIGGNMYGWNTCLVRTGVFQGKEGENDPNSPANFGVFNNVLE
AVKAALAKELGPDFKLKWNPKVNPVTHGDGASAIE*
Coding >Pro_DTO377G3_2|g3568.t1
ATGTCTCGCGTCGAGGACTCTGACCTCGCAGTCGACCTGGCTGAGCAGGATCCCCGCGCCCAGGATCCTCAGGGT
GCTCTCTCCCCTCGGGACCAGCGTGCTAGCTCCGGTCTCGCCATCCCATCGGCAGGCGGTAACACCGTCGAGATC
CCCGCCACCCGCAGCGCCATCAGTGATGCCGCTCAATTCATGCACAACTTGAGCTTGTCTCCCTCCATGAGGGAC
CGCCGGGGATCGCGTAACTCCTTTGGCACTTCGCTCCCTATCCCCCGCTCCCCCCGCATGTCCCGCCTCTCGTCC
GTGCAGCGCGGTGCTCCCTCAGTCTCCCGCGATATCTTGGCCTCTCAGGTTCAGGATATCAACAAGGAGCTGACT
ACCAAGGCGAAGAACATGGCCTTTGCTTTCGATATTGATGGTGTGCTGGCACACGGTAACCACGCCATTGACGAG
GCCAAGGTCGTCCTCAAGATCCTCAACGGCGACAACGAGTTGGGCATCCGCATCCCCCACATTCTCCTCACCAAC
GGTGGTGGTAAGACCGAGGAGGCTCGCTGTGCTCAGCTTACCGAGATTCTCGAGCAGCCCATCTCCACCGACCAG
TTCATTCAATCCCACACTCCCATGCAGGCCCTGGCAGAGTACTACCAGACCGTTCTGGTCCTCGGTGGTGAAGGC
TTTAAGATCCGCGAGGTTGCCGAAAACTACGGCTTCAAGACTGTCGTGCACCCCAAGGATCTCCTCGCCTGGGAC
CCCTCCATCTCCCCCTGGGCTACTCTCACCGAAGCAGAGAAGGCCGAGGCCAAGCCCCGCGACTTCTCCAAGATG
AAGTTCGATGCCATCATGGTCTTCGCTGATTCCCGTGACTACCAGACCGATATCCAGGTCATTATGGATCTGCTG
CTCGCCGAGGACGGCATGATCGGCACCAAGGCCAAGGATCCCGTCGCCACCCGCATTCCTATCTACTTCTCCCAG
GGTGATCTCCTCATGCCCACCGAGCACAAGGGTCTTCCCCGTCTCACCCAGGGTGCCTTCCGTATCGCCATTGAG
GCTCAGTACAAGACACTCACCGGTGTCGACCTCGAGCGTGTTGTCTACGGTAAGCCCGAGCGTGCTACCTACACC
TACGCCGACGAGGTCCTGAAGGCCTGGATGGAGGAGCTCCACGGTGTTTCCCGTCTGCCCGATAACGTCTACATG
ATCGGTGACAACCCCGCTTCCGATATCATCGGTGGAAACATGTATGGCTGGAACACTTGCTTGGTCCGCACTGGT
GTCTTCCAGGGCAAGGAGGGCGAGAATGACCCCAACAGCCCTGCCAACTTCGGTGTCTTCAACAATGTCCTCGAA
GCCGTCAAGGCTGCCCTCGCCAAGGAGCTCGGCCCCGACTTCAAGCTCAAGTGGAACCCCAAGGTCAACCCCGTC
ACTCACGGCGACGGTGCCTCCGCCATTGAGTAA
Transcript >Pro_DTO377G3_2|g3568.t1
ATGTCTCGCGTCGAGGACTCTGACCTCGCAGTCGACCTGGCTGAGCAGGATCCCCGCGCCCAGGATCCTCAGGGT
GCTCTCTCCCCTCGGGACCAGCGTGCTAGCTCCGGTCTCGCCATCCCATCGGCAGGCGGTAACACCGTCGAGATC
CCCGCCACCCGCAGCGCCATCAGTGATGCCGCTCAATTCATGCACAACTTGAGCTTGTCTCCCTCCATGAGGGAC
CGCCGGGGATCGCGTAACTCCTTTGGCACTTCGCTCCCTATCCCCCGCTCCCCCCGCATGTCCCGCCTCTCGTCC
GTGCAGCGCGGTGCTCCCTCAGTCTCCCGCGATATCTTGGCCTCTCAGGTTCAGGATATCAACAAGGAGCTGACT
ACCAAGGCGAAGAACATGGCCTTTGCTTTCGATATTGATGGTGTGCTGGCACACGGTAACCACGCCATTGACGAG
GCCAAGGTCGTCCTCAAGATCCTCAACGGCGACAACGAGTTGGGCATCCGCATCCCCCACATTCTCCTCACCAAC
GGTGGTGGTAAGACCGAGGAGGCTCGCTGTGCTCAGCTTACCGAGATTCTCGAGCAGCCCATCTCCACCGACCAG
TTCATTCAATCCCACACTCCCATGCAGGCCCTGGCAGAGTACTACCAGACCGTTCTGGTCCTCGGTGGTGAAGGC
TTTAAGATCCGCGAGGTTGCCGAAAACTACGGCTTCAAGACTGTCGTGCACCCCAAGGATCTCCTCGCCTGGGAC
CCCTCCATCTCCCCCTGGGCTACTCTCACCGAAGCAGAGAAGGCCGAGGCCAAGCCCCGCGACTTCTCCAAGATG
AAGTTCGATGCCATCATGGTCTTCGCTGATTCCCGTGACTACCAGACCGATATCCAGGTCATTATGGATCTGCTG
CTCGCCGAGGACGGCATGATCGGCACCAAGGCCAAGGATCCCGTCGCCACCCGCATTCCTATCTACTTCTCCCAG
GGTGATCTCCTCATGCCCACCGAGCACAAGGGTCTTCCCCGTCTCACCCAGGGTGCCTTCCGTATCGCCATTGAG
GCTCAGTACAAGACACTCACCGGTGTCGACCTCGAGCGTGTTGTCTACGGTAAGCCCGAGCGTGCTACCTACACC
TACGCCGACGAGGTCCTGAAGGCCTGGATGGAGGAGCTCCACGGTGTTTCCCGTCTGCCCGATAACGTCTACATG
ATCGGTGACAACCCCGCTTCCGATATCATCGGTGGAAACATGTATGGCTGGAACACTTGCTTGGTCCGCACTGGT
GTCTTCCAGGGCAAGGAGGGCGAGAATGACCCCAACAGCCCTGCCAACTTCGGTGTCTTCAACAATGTCCTCGAA
GCCGTCAAGGCTGCCCTCGCCAAGGAGCTCGGCCCCGACTTCAAGCTCAAGTGGAACCCCAAGGTCAACCCCGTC
ACTCACGGCGACGGTGCCTCCGCCATTGAGTAA
Gene >Pro_DTO377G3_2|g3568.t1
ATGTCTCGCGTCGAGGACTCTGACCTCGCAGTCGACCTGGCTGAGCAGGATCCCCGCGCCCAGGATCCTCAGGGT
GCTCTCTCCCCTCGGGACCAGCGTGCTAGCTCCGGTCTCGCCATCCCATCGGCAGGCGGTAACACCGTCGAGATC
CCCGCCACCCGCAGCGCCATCAGTGATGCCGCTCAATTCATGCACAACTTGAGCTTGTCTCCCTCCATGAGGGAC
CGCCGGGGATCGCGTAACTCCTTTGGCACTTCGCTCCCTATCCCCCGCTCCCCCCGCATGTCCCGCCTCTCGTCC
GTGCAGCGCGGTGCTCCCTCAGTCTCCCGCGATATCTTGGCCTCTCAGGTTCAGGATATCAACAAGGAGCTGACT
ACCAAGGCGAAGAACATGGCCTTTGCTTTCGATATTGATGGTGTGCTGGCACACGGTAACCACGCCATTGACGAG
GCCAAGGTCGTCCTCAAGATCCTCAACGGCGACAACGAGTTGGGCATCCGCATCCCCCACATTCTCCTCACCAAC
GGTGGTGGTAAGACCGAGGAGGCTCGCTGTGCTCAGCTTACCGAGATTCTCGAGCAGCCCATCTCCACCGACCAG
TTCATTCAATCCCACACTCCCATGCAGGCCCTGGCAGAGTACTACCAGACCGTTCTGGTCCTCGGTGGTGAAGGC
TTTAAGATCCGCGAGGTTGCCGAAAACTACGGCTTCAAGACTGTCGTGCACCCCAAGGATCTCCTCGCCTGGGAC
CCCTCCATCTCCCCCTGGGCTACTCTCACCGAAGCAGAGAAGGCCGAGGCCAAGCCCCGCGACTTCTCCAAGATG
AAGTTCGATGCCATCATGGTCTTCGCTGATTCCCGTGACTACCAGACCGATATCCAGGTCATTATGGATCTGCTG
CTCGCCGAGGACGGCATGATCGGCACCAAGGCCAAGGATCCCGTCGCCACCCGCATTCCTATCTACTTCTCCCAG
GGTGATCTCCTCATGCCCACCGAGCACAAGGGTCTTCCCCGTCTCACCCAGGGTGCCTTCCGTATCGCCATTGAG
GCTCAGTACAAGACACTCACCGGTGTCGACCTCGAGCGTGTTGTCTACGGTAAGCCCGAGCGTGCTACCTACACC
TACGCCGACGAGGTCCTGAAGGCCTGGATGGAGGAGCTCCACGGTGTTTCCCGTCTGCCCGATAACGTCTACATG
ATCGGTGACAACCCCGCTTCCGATATCATCGGTGGAAACATGTATGGCTGGAACACTTGCTTGGTCCGCACTGGT
GTCTTCCAGGGCAAGGAGGGCGAGAATGACCCCAACAGCCCTGCCAACTTCGGTGTCTTCAACAATGTCCTCGAA
GCCGTCAAGGCTGCCCTCGCCAAGGAGCTCGGCCCCGACTTCAAGCTCAAGTGGAACCCCAAGGTCAACCCCGTC
ACTCACGGCGACGGTGCCTCCGCCATTGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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