Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3564.t1
Gene name
Locationscaffold_06:110844..112833
Strand-
Gene length (bp)1989
Transcript length (bp)1929
Coding sequence length (bp)1929
Protein length (aa) 643

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03909 BSD BSD domain 4.3E-12 149 208
PF03909 BSD BSD domain 1.8E-13 229 281
PF08567 PH_TFIIH TFIIH p62 subunit, N-terminal domain 6.2E-25 9 101

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3564.t1
MSPPSGAASYKKKDGTLAISADEKSVSWSPAVAGAGNTITIPVVNITNLQQTPASNPKVMLKIFSQAPDAPPNST
PDQYVFLFTAGANARPQADVIKDTLSARVNAVKSGTPSQTPGARGASEGLSAAMAIANAVTSAGTSKNPVDEENR
LRSDIELQQSLLRSDSNLQRMFFEGLHTKPEALSSGSFVSQFWSTRLHLLRAHAIEQGQIRGSYNVLSSLKPRVE
DNVTRLNISKEQIQLIFTQHALVKRVYDENVPKLSEQQFWSRFFQSRLFKKLRGERITEADATDAVLDKYLRTDE
AAQPDRDTNIHHFLDLAGNEVNHSERSGNRPDLDMRPSGLDKVPIIRTLNSLSEKIMANVAPIDGDMSAPIGINE
EAWKRLQLQDLCSEEHQSPITLNIRDQSRFFTHGQEEDKTKQFVKQDPEQLLQILRTEINQNLPSQGNTQLGKLV
DPGDDEDEEMEDAPASRRPVGSSAALHDAFSQILEALRERRAQMKERATSETYGLSIALFDRLTLTHATTTEFLH
QFWQAFLSGNPDRAGEVASLAESLHRAMERIKAVANDAEAERKVEVDRLKKQARDMYESTGRKLRVNLEGVEGGQ
KVVNQLLGPTLHALEVASTRYQKELAEQNKEAAMAAQDTAGT*
Coding >Pro_DTO377G3_2|g3564.t1
ATGTCACCTCCGAGCGGAGCGGCCTCTTACAAGAAGAAAGATGGGACCCTAGCTATATCCGCCGATGAGAAGTCG
GTTTCATGGAGTCCTGCGGTCGCAGGGGCCGGGAATACGATCACAATCCCCGTGGTCAACATCACTAATCTACAA
CAGACCCCAGCCTCGAACCCGAAAGTGATGCTCAAGATCTTTTCCCAAGCCCCCGATGCGCCTCCGAATAGTACG
CCCGATCAATATGTCTTCCTGTTCACGGCTGGAGCAAACGCCCGCCCGCAGGCCGATGTCATCAAAGACACATTG
AGTGCTCGAGTCAATGCGGTGAAGTCGGGCACGCCATCCCAGACGCCGGGAGCAAGAGGTGCGTCTGAGGGACTG
TCCGCGGCGATGGCGATTGCGAATGCTGTGACGTCCGCCGGGACATCGAAGAACCCCGTGGACGAGGAGAATAGG
CTTCGGTCCGACATAGAACTGCAGCAGTCGCTATTACGATCTGATTCGAATCTGCAGCGGATGTTTTTCGAGGGG
TTGCATACGAAACCGGAAGCGTTGTCGTCTGGATCGTTTGTGTCGCAGTTTTGGTCAACACGACTGCATTTACTG
CGCGCGCACGCAATCGAACAGGGCCAAATCCGTGGCTCGTATAATGTGTTGTCTTCACTCAAGCCGCGAGTCGAG
GATAATGTCACGCGGTTAAATATCAGCAAAGAGCAGATCCAGCTCATCTTCACGCAGCACGCACTGGTCAAACGC
GTGTACGATGAGAATGTGCCTAAGCTCAGCGAACAACAGTTCTGGTCGCGGTTTTTCCAGAGTCGGCTGTTCAAG
AAATTGCGCGGAGAGCGGATTACGGAGGCTGATGCAACGGATGCCGTGCTGGACAAATATCTCCGGACGGACGAG
GCTGCTCAGCCGGACCGCGACACGAATATCCATCACTTTTTGGATCTGGCTGGCAATGAAGTAAATCACAGCGAG
CGTAGCGGAAATCGGCCTGATCTAGATATGAGACCGTCTGGCCTCGACAAAGTACCTATCATCCGGACGCTGAAC
AGCTTGAGTGAAAAGATCATGGCCAACGTGGCTCCGATTGACGGTGATATGAGTGCCCCGATAGGCATCAACGAA
GAGGCATGGAAAAGACTCCAGCTGCAGGATCTTTGTAGCGAAGAACATCAAAGTCCCATCACTCTGAACATTCGT
GATCAAAGTCGTTTCTTCACTCATGGCCAAGAGGAGGATAAGACCAAGCAATTCGTGAAACAAGATCCGGAGCAG
CTTCTGCAGATTCTCCGTACGGAGATTAATCAAAATCTCCCATCGCAGGGCAATACACAACTAGGCAAGCTGGTG
GACCCAGGCGATGACGAAGACGAGGAGATGGAGGATGCACCTGCCAGCCGTCGCCCTGTCGGCTCATCTGCTGCT
CTCCACGATGCATTTTCCCAGATCCTGGAAGCGTTGCGTGAGCGTCGTGCTCAGATGAAGGAGCGAGCGACATCA
GAAACATACGGGCTGTCGATAGCGCTCTTTGACCGCTTGACGTTGACACACGCTACAACCACAGAGTTCCTGCAC
CAGTTCTGGCAGGCGTTTCTCTCAGGCAACCCCGACCGCGCTGGAGAGGTTGCGTCTTTAGCAGAGTCTCTCCAT
CGAGCAATGGAGCGTATTAAGGCTGTTGCTAATGACGCAGAGGCTGAGCGGAAGGTCGAAGTTGACCGGCTGAAG
AAGCAGGCCCGTGACATGTACGAGAGCACGGGGCGAAAATTGCGAGTCAACTTAGAAGGCGTGGAGGGGGGCCAG
AAGGTTGTGAACCAGCTTCTTGGTCCTACGCTCCATGCACTGGAGGTTGCATCGACTCGATATCAAAAAGAATTG
GCCGAACAAAATAAAGAAGCGGCCATGGCTGCTCAAGACACGGCGGGGACATAG
Transcript >Pro_DTO377G3_2|g3564.t1
ATGTCACCTCCGAGCGGAGCGGCCTCTTACAAGAAGAAAGATGGGACCCTAGCTATATCCGCCGATGAGAAGTCG
GTTTCATGGAGTCCTGCGGTCGCAGGGGCCGGGAATACGATCACAATCCCCGTGGTCAACATCACTAATCTACAA
CAGACCCCAGCCTCGAACCCGAAAGTGATGCTCAAGATCTTTTCCCAAGCCCCCGATGCGCCTCCGAATAGTACG
CCCGATCAATATGTCTTCCTGTTCACGGCTGGAGCAAACGCCCGCCCGCAGGCCGATGTCATCAAAGACACATTG
AGTGCTCGAGTCAATGCGGTGAAGTCGGGCACGCCATCCCAGACGCCGGGAGCAAGAGGTGCGTCTGAGGGACTG
TCCGCGGCGATGGCGATTGCGAATGCTGTGACGTCCGCCGGGACATCGAAGAACCCCGTGGACGAGGAGAATAGG
CTTCGGTCCGACATAGAACTGCAGCAGTCGCTATTACGATCTGATTCGAATCTGCAGCGGATGTTTTTCGAGGGG
TTGCATACGAAACCGGAAGCGTTGTCGTCTGGATCGTTTGTGTCGCAGTTTTGGTCAACACGACTGCATTTACTG
CGCGCGCACGCAATCGAACAGGGCCAAATCCGTGGCTCGTATAATGTGTTGTCTTCACTCAAGCCGCGAGTCGAG
GATAATGTCACGCGGTTAAATATCAGCAAAGAGCAGATCCAGCTCATCTTCACGCAGCACGCACTGGTCAAACGC
GTGTACGATGAGAATGTGCCTAAGCTCAGCGAACAACAGTTCTGGTCGCGGTTTTTCCAGAGTCGGCTGTTCAAG
AAATTGCGCGGAGAGCGGATTACGGAGGCTGATGCAACGGATGCCGTGCTGGACAAATATCTCCGGACGGACGAG
GCTGCTCAGCCGGACCGCGACACGAATATCCATCACTTTTTGGATCTGGCTGGCAATGAAGTAAATCACAGCGAG
CGTAGCGGAAATCGGCCTGATCTAGATATGAGACCGTCTGGCCTCGACAAAGTACCTATCATCCGGACGCTGAAC
AGCTTGAGTGAAAAGATCATGGCCAACGTGGCTCCGATTGACGGTGATATGAGTGCCCCGATAGGCATCAACGAA
GAGGCATGGAAAAGACTCCAGCTGCAGGATCTTTGTAGCGAAGAACATCAAAGTCCCATCACTCTGAACATTCGT
GATCAAAGTCGTTTCTTCACTCATGGCCAAGAGGAGGATAAGACCAAGCAATTCGTGAAACAAGATCCGGAGCAG
CTTCTGCAGATTCTCCGTACGGAGATTAATCAAAATCTCCCATCGCAGGGCAATACACAACTAGGCAAGCTGGTG
GACCCAGGCGATGACGAAGACGAGGAGATGGAGGATGCACCTGCCAGCCGTCGCCCTGTCGGCTCATCTGCTGCT
CTCCACGATGCATTTTCCCAGATCCTGGAAGCGTTGCGTGAGCGTCGTGCTCAGATGAAGGAGCGAGCGACATCA
GAAACATACGGGCTGTCGATAGCGCTCTTTGACCGCTTGACGTTGACACACGCTACAACCACAGAGTTCCTGCAC
CAGTTCTGGCAGGCGTTTCTCTCAGGCAACCCCGACCGCGCTGGAGAGGTTGCGTCTTTAGCAGAGTCTCTCCAT
CGAGCAATGGAGCGTATTAAGGCTGTTGCTAATGACGCAGAGGCTGAGCGGAAGGTCGAAGTTGACCGGCTGAAG
AAGCAGGCCCGTGACATGTACGAGAGCACGGGGCGAAAATTGCGAGTCAACTTAGAAGGCGTGGAGGGGGGCCAG
AAGGTTGTGAACCAGCTTCTTGGTCCTACGCTCCATGCACTGGAGGTTGCATCGACTCGATATCAAAAAGAATTG
GCCGAACAAAATAAAGAAGCGGCCATGGCTGCTCAAGACACGGCGGGGACATAG
Gene >Pro_DTO377G3_2|g3564.t1
ATGTCACCTCCGAGCGGAGCGGCCTCTTACAAGAAGAAAGATGGGACCCTAGCTATATCCGCCGATGAGAAGTCG
GTTTCATGGAGTCCTGCGGTCGCAGGGGCCGGGAATACGATCACAATCCCCGTGGTCAACATCACTAGTATGCAC
CCACCCCACCATGCACAAGGTTTGTCTCTTTGCTGACTCGCGCGACTGCTAGATCTACAACAGACCCCAGCCTCG
AACCCGAAAGTGATGCTCAAGATCTTTTCCCAAGCCCCCGATGCGCCTCCGAATAGTACGCCCGATCAATATGTC
TTCCTGTTCACGGCTGGAGCAAACGCCCGCCCGCAGGCCGATGTCATCAAAGACACATTGAGTGCTCGAGTCAAT
GCGGTGAAGTCGGGCACGCCATCCCAGACGCCGGGAGCAAGAGGTGCGTCTGAGGGACTGTCCGCGGCGATGGCG
ATTGCGAATGCTGTGACGTCCGCCGGGACATCGAAGAACCCCGTGGACGAGGAGAATAGGCTTCGGTCCGACATA
GAACTGCAGCAGTCGCTATTACGATCTGATTCGAATCTGCAGCGGATGTTTTTCGAGGGGTTGCATACGAAACCG
GAAGCGTTGTCGTCTGGATCGTTTGTGTCGCAGTTTTGGTCAACACGACTGCATTTACTGCGCGCGCACGCAATC
GAACAGGGCCAAATCCGTGGCTCGTATAATGTGTTGTCTTCACTCAAGCCGCGAGTCGAGGATAATGTCACGCGG
TTAAATATCAGCAAAGAGCAGATCCAGCTCATCTTCACGCAGCACGCACTGGTCAAACGCGTGTACGATGAGAAT
GTGCCTAAGCTCAGCGAACAACAGTTCTGGTCGCGGTTTTTCCAGAGTCGGCTGTTCAAGAAATTGCGCGGAGAG
CGGATTACGGAGGCTGATGCAACGGATGCCGTGCTGGACAAATATCTCCGGACGGACGAGGCTGCTCAGCCGGAC
CGCGACACGAATATCCATCACTTTTTGGATCTGGCTGGCAATGAAGTAAATCACAGCGAGCGTAGCGGAAATCGG
CCTGATCTAGATATGAGACCGTCTGGCCTCGACAAAGTACCTATCATCCGGACGCTGAACAGCTTGAGTGAAAAG
ATCATGGCCAACGTGGCTCCGATTGACGGTGATATGAGTGCCCCGATAGGCATCAACGAAGAGGCATGGAAAAGA
CTCCAGCTGCAGGATCTTTGTAGCGAAGAACATCAAAGTCCCATCACTCTGAACATTCGTGATCAAAGTCGTTTC
TTCACTCATGGCCAAGAGGAGGATAAGACCAAGCAATTCGTGAAACAAGATCCGGAGCAGCTTCTGCAGATTCTC
CGTACGGAGATTAATCAAAATCTCCCATCGCAGGGCAATACACAACTAGGCAAGCTGGTGGACCCAGGCGATGAC
GAAGACGAGGAGATGGAGGATGCACCTGCCAGCCGTCGCCCTGTCGGCTCATCTGCTGCTCTCCACGATGCATTT
TCCCAGATCCTGGAAGCGTTGCGTGAGCGTCGTGCTCAGATGAAGGAGCGAGCGACATCAGAAACATACGGGCTG
TCGATAGCGCTCTTTGACCGCTTGACGTTGACACACGCTACAACCACAGAGTTCCTGCACCAGTTCTGGCAGGCG
TTTCTCTCAGGCAACCCCGACCGCGCTGGAGAGGTTGCGTCTTTAGCAGAGTCTCTCCATCGAGCAATGGAGCGT
ATTAAGGCTGTTGCTAATGACGCAGAGGCTGAGCGGAAGGTCGAAGTTGACCGGCTGAAGAAGCAGGCCCGTGAC
ATGTACGAGAGCACGGGGCGAAAATTGCGAGTCAACTTAGAAGGCGTGGAGGGGGGCCAGAAGGTTGTGAACCAG
CTTCTTGGTCCTACGCTCCATGCACTGGAGGTTGCATCGACTCGATATCAAAAAGAATTGGCCGAACAAAATAAA
GAAGCGGCCATGGCTGCTCAAGACACGGCGGGGACATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail