Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3555.t1
Gene name
Locationscaffold_06:86452..87529
Strand-
Gene length (bp)1077
Transcript length (bp)1026
Coding sequence length (bp)1026
Protein length (aa) 342

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02826 2-Hacid_dh_C D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 7.9E-56 126 303
PF00389 2-Hacid_dh D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 1.4E-19 57 335
PF03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase 1.1E-07 164 272

GO

GO Term Description Terminal node
GO:0051287 NAD binding Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0055114 oxidation-reduction process Yes
GO:0050661 NADP binding Yes
GO:0000166 nucleotide binding No
GO:0008150 biological_process No
GO:1901265 nucleoside phosphate binding No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0008152 metabolic process No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3555.t1
MTIGRKPRVVSLGEPAFVGSEYLTQFKTEFDYSVLPATNREEAQVLLPKDINENGPIDAFIVRMGTPPYEPLDQD
FFRALAPGCKIITSASAGYNEFDVDWMTNQEIVFCNTVNAVAEATADMAIFLILAVLRNTTNAERSARSGMWRKG
ANLVPTCDPSGLTLGIVGMGAIGKYLAKKAAVFNMKIKYYNRHQLPASEEAAYGATYCQSLHELLRESDVVSLNC
PLNAATTNLISEAEFSAMKDGVFLINTARGAVIDEKALIAALESGKVQRAGLDVFVNEPSPNPYFLQSDKIVVQP
HLGGLTEKAFQKAERECFENIRAFFKTGKANSPVNIKVQTP*
Coding >Pro_DTO377G3_2|g3555.t1
ATGACTATCGGAAGAAAGCCGCGCGTTGTTTCCCTCGGGGAGCCTGCATTCGTGGGCAGTGAATATCTTACTCAA
TTCAAGACCGAATTTGACTATTCCGTCCTCCCTGCAACAAATCGCGAGGAAGCCCAGGTATTGCTACCCAAAGAC
ATCAACGAAAATGGACCGATAGACGCGTTCATCGTTCGCATGGGTACGCCACCCTACGAGCCACTCGATCAGGAT
TTTTTTCGAGCACTAGCACCGGGGTGTAAGATTATCACTTCTGCTAGTGCCGGATACAACGAGTTCGACGTGGAC
TGGATGACAAACCAGGAAATTGTGTTTTGTAATACTGTGAATGCCGTCGCTGAGGCTACAGCAGACATGGCTATA
TTTCTGATACTTGCTGTTCTGAGGAACACTACAAACGCCGAGCGGAGTGCACGGAGCGGGATGTGGAGGAAGGGC
GCAAACCTGGTTCCTACTTGTGATCCGTCGGGATTGACACTTGGTATTGTCGGTATGGGTGCTATTGGAAAGTAC
CTCGCCAAGAAAGCCGCGGTCTTCAATATGAAGATCAAGTACTACAATCGACACCAACTACCGGCCTCCGAAGAA
GCAGCGTACGGTGCAACATATTGCCAGTCTCTACATGAGCTTCTGCGCGAATCAGATGTCGTCTCCTTGAATTGC
CCTCTGAATGCGGCAACCACGAATCTAATCAGCGAAGCCGAATTCTCCGCTATGAAAGACGGTGTATTCCTCATT
AACACGGCTAGAGGAGCAGTCATCGACGAAAAGGCTCTCATTGCGGCACTTGAGTCAGGCAAGGTACAGCGGGCT
GGACTTGATGTTTTTGTGAACGAGCCGAGTCCGAATCCCTACTTTTTACAAAGTGATAAAATCGTTGTGCAGCCA
CATTTGGGTGGTTTGACTGAGAAGGCATTCCAAAAAGCCGAGAGAGAATGCTTTGAGAACATCCGTGCTTTTTTC
AAGACTGGGAAGGCAAACTCGCCAGTGAATATCAAAGTCCAAACCCCCTGA
Transcript >Pro_DTO377G3_2|g3555.t1
ATGACTATCGGAAGAAAGCCGCGCGTTGTTTCCCTCGGGGAGCCTGCATTCGTGGGCAGTGAATATCTTACTCAA
TTCAAGACCGAATTTGACTATTCCGTCCTCCCTGCAACAAATCGCGAGGAAGCCCAGGTATTGCTACCCAAAGAC
ATCAACGAAAATGGACCGATAGACGCGTTCATCGTTCGCATGGGTACGCCACCCTACGAGCCACTCGATCAGGAT
TTTTTTCGAGCACTAGCACCGGGGTGTAAGATTATCACTTCTGCTAGTGCCGGATACAACGAGTTCGACGTGGAC
TGGATGACAAACCAGGAAATTGTGTTTTGTAATACTGTGAATGCCGTCGCTGAGGCTACAGCAGACATGGCTATA
TTTCTGATACTTGCTGTTCTGAGGAACACTACAAACGCCGAGCGGAGTGCACGGAGCGGGATGTGGAGGAAGGGC
GCAAACCTGGTTCCTACTTGTGATCCGTCGGGATTGACACTTGGTATTGTCGGTATGGGTGCTATTGGAAAGTAC
CTCGCCAAGAAAGCCGCGGTCTTCAATATGAAGATCAAGTACTACAATCGACACCAACTACCGGCCTCCGAAGAA
GCAGCGTACGGTGCAACATATTGCCAGTCTCTACATGAGCTTCTGCGCGAATCAGATGTCGTCTCCTTGAATTGC
CCTCTGAATGCGGCAACCACGAATCTAATCAGCGAAGCCGAATTCTCCGCTATGAAAGACGGTGTATTCCTCATT
AACACGGCTAGAGGAGCAGTCATCGACGAAAAGGCTCTCATTGCGGCACTTGAGTCAGGCAAGGTACAGCGGGCT
GGACTTGATGTTTTTGTGAACGAGCCGAGTCCGAATCCCTACTTTTTACAAAGTGATAAAATCGTTGTGCAGCCA
CATTTGGGTGGTTTGACTGAGAAGGCATTCCAAAAAGCCGAGAGAGAATGCTTTGAGAACATCCGTGCTTTTTTC
AAGACTGGGAAGGCAAACTCGCCAGTGAATATCAAAGTCCAAACCCCCTGA
Gene >Pro_DTO377G3_2|g3555.t1
ATGACTATCGGAAGAAAGCCGCGCGTTGTTTCCCTCGGGGAGCCTGCATTCGTGGGCAGTGAATATCTTACTCAA
TTCAAGACCGAATTTGACTATTCCGTCCTCCCTGCAACAAATCGCGAGGAAGCCCAGGTATTGCTACCCAAAGAC
ATCAACGAAAATGGACCGATAGACGCGTTCATCGTTCGCATGGGTACGCCACCCTACGAGCCACTCGATCAGGAT
TTTTTTCGAGCACTAGCACCGGGGTGTAAGATTATCACTTCTGCTAGTGCCGGATACAACGAGTTCGACGTGGAC
TGGATGACAAACCAGGAAATTGTGTTTTGTAATACTGTGAATGCCGTCGCTGAGGCTACAGCAGACATGGCTATA
TTTCTGATACTTGCTGTTCTGAGGAACACTACAAACGCCGAGCGGAGTGCACGGAGCGGGATGTGGAGGAAGGGC
GCAAACCTGGTTCCTACTTGTGATCCGTCGGGATTGACACTTGGTATTGTCGGTATGGGTGCTATTGGAAAGGTG
AATAGTCCGAAGTCCATTGACTCGGAGCGCTGCTGACTTCCTTCTCAGTACCTCGCCAAGAAAGCCGCGGTCTTC
AATATGAAGATCAAGTACTACAATCGACACCAACTACCGGCCTCCGAAGAAGCAGCGTACGGTGCAACATATTGC
CAGTCTCTACATGAGCTTCTGCGCGAATCAGATGTCGTCTCCTTGAATTGCCCTCTGAATGCGGCAACCACGAAT
CTAATCAGCGAAGCCGAATTCTCCGCTATGAAAGACGGTGTATTCCTCATTAACACGGCTAGAGGAGCAGTCATC
GACGAAAAGGCTCTCATTGCGGCACTTGAGTCAGGCAAGGTACAGCGGGCTGGACTTGATGTTTTTGTGAACGAG
CCGAGTCCGAATCCCTACTTTTTACAAAGTGATAAAATCGTTGTGCAGCCACATTTGGGTGGTTTGACTGAGAAG
GCATTCCAAAAAGCCGAGAGAGAATGCTTTGAGAACATCCGTGCTTTTTTCAAGACTGGGAAGGCAAACTCGCCA
GTGAATATCAAAGTCCAAACCCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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