© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3542.t1 |
| Gene name | |
| Location | scaffold_06:59060..60689 |
| Strand | + |
| Gene length (bp) | 1629 |
| Transcript length (bp) | 1515 |
| Coding sequence length (bp) | 1515 |
| Protein length (aa) | 505 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.9E-83 | 35 | 474 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.9E-24 | 58 | 423 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 65 | 87 | 22 |
| 3 | 94 | 113 | 19 |
| 4 | 118 | 140 | 22 |
| 5 | 160 | 182 | 22 |
| 6 | 192 | 214 | 22 |
| 7 | 341 | 363 | 22 |
| 8 | 373 | 395 | 22 |
| 9 | 440 | 459 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3542.t1 MASKVLHNNTNSSWMKDPGLRKLNLGIGFMLSASATAGYCASMINGLLVLPEFSNFLKDLDTNARGLIIAAVSLG SFCSFIPGSYIADNLGRRICVLIGSTLVIIASIIQVATNNPWVFFFARVLAGIGVGVSQTAAPLLITESTHPRQR QTFTGLYNALWFIGSITSAGIGFAGLTIVGSWSWKLPCLTQIFYPVLQLVGLCFVPESPRWLVSRGRKDEGMAIL ARYHANGDENDELVQDEFYQICKSINAESDKSCRRWSSFFASRSNMHRLSICVILGFMQEWSGNGVVSYYLAPIL ASVGIYNASHQAAINISLQVWNLAFAVGGAMAADRYGRRKLWLIATMLMFIYLSAATTMSGLFQEMHVLEAGIAV VPMLFLFCSAYDMAYMPLFIAYPAEILPFQLRAKGLAITLTTDSMACFFNQYINPVALAAIHWKYFLVYLGCLVI FMATIYFLFPETKGLSLEEVARIFEKDKAYQVERTPSDVSQELLVFPQKGSTSS* |
| Coding | >Pro_DTO377G3_2|g3542.t1 ATGGCCTCCAAGGTCTTACACAACAACACCAACAGCAGCTGGATGAAGGATCCAGGGCTGCGAAAACTAAACCTA GGGATTGGGTTTATGCTATCTGCATCGGCTACAGCTGGATACTGTGCTAGCATGATCAATGGCCTCCTGGTGCTT CCCGAATTCTCGAATTTTTTGAAAGACCTGGACACAAATGCTCGAGGTCTTATTATCGCAGCTGTCTCACTCGGA TCTTTTTGCTCATTCATCCCCGGATCTTACATCGCCGACAATCTGGGGCGGAGGATCTGCGTTCTGATCGGTTCC ACTTTAGTGATCATCGCCTCGATTATCCAAGTCGCCACAAATAATCCGTGGGTCTTCTTCTTCGCTCGTGTTCTC GCTGGAATCGGAGTCGGAGTCTCACAAACTGCCGCGCCATTGCTCATTACCGAATCAACACACCCACGTCAACGA CAGACCTTCACGGGTTTATACAATGCACTTTGGTTCATCGGGTCGATCACGTCGGCTGGTATTGGTTTTGCTGGA CTCACCATCGTAGGGAGTTGGTCATGGAAACTCCCCTGCTTGACGCAGATCTTCTATCCGGTCCTTCAATTGGTT GGGCTTTGCTTTGTTCCCGAGAGCCCGAGATGGCTGGTCTCCCGGGGCAGGAAAGATGAGGGAATGGCTATACTA GCAAGATATCACGCTAATGGTGATGAGAACGACGAACTTGTTCAGGACGAATTCTACCAGATTTGCAAGAGCATC AATGCGGAGTCTGACAAGAGCTGCCGCCGCTGGAGCAGCTTCTTTGCATCCCGGAGCAACATGCATCGTCTATCC ATTTGCGTGATTCTGGGATTCATGCAAGAATGGTCTGGAAATGGCGTGGTTTCTTATTACCTAGCCCCGATCCTA GCATCAGTCGGTATATACAACGCATCTCACCAGGCCGCCATCAATATCAGCTTGCAGGTGTGGAACCTGGCATTC GCAGTCGGCGGAGCAATGGCCGCAGACCGATACGGACGACGAAAACTCTGGCTAATCGCCACAATGTTGATGTTC ATCTACCTATCCGCCGCGACGACCATGTCGGGTCTTTTCCAAGAGATGCATGTGCTGGAGGCTGGTATTGCGGTG GTACCCATGCTTTTCCTCTTCTGCAGTGCTTACGACATGGCATATATGCCCTTGTTTATCGCATACCCAGCTGAA ATCCTGCCCTTCCAGCTCCGCGCCAAGGGCCTTGCCATCACACTCACCACCGACTCGATGGCTTGCTTCTTCAAC CAGTATATAAACCCTGTGGCCTTGGCGGCCATCCACTGGAAATACTTCCTGGTGTATCTGGGCTGTCTTGTGATT TTCATGGCAACGATCTACTTCCTCTTCCCGGAGACTAAAGGTCTGTCTTTGGAAGAGGTGGCGCGGATCTTTGAA AAGGACAAGGCTTACCAGGTGGAGAGGACACCTTCTGATGTTTCGCAAGAGCTGCTTGTGTTCCCCCAAAAGGGC AGCACCTCGTCGTGA |
| Transcript | >Pro_DTO377G3_2|g3542.t1 ATGGCCTCCAAGGTCTTACACAACAACACCAACAGCAGCTGGATGAAGGATCCAGGGCTGCGAAAACTAAACCTA GGGATTGGGTTTATGCTATCTGCATCGGCTACAGCTGGATACTGTGCTAGCATGATCAATGGCCTCCTGGTGCTT CCCGAATTCTCGAATTTTTTGAAAGACCTGGACACAAATGCTCGAGGTCTTATTATCGCAGCTGTCTCACTCGGA TCTTTTTGCTCATTCATCCCCGGATCTTACATCGCCGACAATCTGGGGCGGAGGATCTGCGTTCTGATCGGTTCC ACTTTAGTGATCATCGCCTCGATTATCCAAGTCGCCACAAATAATCCGTGGGTCTTCTTCTTCGCTCGTGTTCTC GCTGGAATCGGAGTCGGAGTCTCACAAACTGCCGCGCCATTGCTCATTACCGAATCAACACACCCACGTCAACGA CAGACCTTCACGGGTTTATACAATGCACTTTGGTTCATCGGGTCGATCACGTCGGCTGGTATTGGTTTTGCTGGA CTCACCATCGTAGGGAGTTGGTCATGGAAACTCCCCTGCTTGACGCAGATCTTCTATCCGGTCCTTCAATTGGTT GGGCTTTGCTTTGTTCCCGAGAGCCCGAGATGGCTGGTCTCCCGGGGCAGGAAAGATGAGGGAATGGCTATACTA GCAAGATATCACGCTAATGGTGATGAGAACGACGAACTTGTTCAGGACGAATTCTACCAGATTTGCAAGAGCATC AATGCGGAGTCTGACAAGAGCTGCCGCCGCTGGAGCAGCTTCTTTGCATCCCGGAGCAACATGCATCGTCTATCC ATTTGCGTGATTCTGGGATTCATGCAAGAATGGTCTGGAAATGGCGTGGTTTCTTATTACCTAGCCCCGATCCTA GCATCAGTCGGTATATACAACGCATCTCACCAGGCCGCCATCAATATCAGCTTGCAGGTGTGGAACCTGGCATTC GCAGTCGGCGGAGCAATGGCCGCAGACCGATACGGACGACGAAAACTCTGGCTAATCGCCACAATGTTGATGTTC ATCTACCTATCCGCCGCGACGACCATGTCGGGTCTTTTCCAAGAGATGCATGTGCTGGAGGCTGGTATTGCGGTG GTACCCATGCTTTTCCTCTTCTGCAGTGCTTACGACATGGCATATATGCCCTTGTTTATCGCATACCCAGCTGAA ATCCTGCCCTTCCAGCTCCGCGCCAAGGGCCTTGCCATCACACTCACCACCGACTCGATGGCTTGCTTCTTCAAC CAGTATATAAACCCTGTGGCCTTGGCGGCCATCCACTGGAAATACTTCCTGGTGTATCTGGGCTGTCTTGTGATT TTCATGGCAACGATCTACTTCCTCTTCCCGGAGACTAAAGGTCTGTCTTTGGAAGAGGTGGCGCGGATCTTTGAA AAGGACAAGGCTTACCAGGTGGAGAGGACACCTTCTGATGTTTCGCAAGAGCTGCTTGTGTTCCCCCAAAAGGGC AGCACCTCGTCGTGA |
| Gene | >Pro_DTO377G3_2|g3542.t1 ATGGCCTCCAAGGTCTTACACAACAACACCAACAGCAGCTGGATGAAGGATCCAGGGCTGCGAAAACTAAACCTA GGGATTGGGTTTATGCTATCTGCATCGGCTACAGCTGGATACTGTGCTAGCATGATCAATGGCCTCCTGGTGCTT CCCGAATGTAGGCATCTTATACATCATGCTATATAGGAACAAAGCTAATCAAAGAAAACAACAGTCTCGAATTTT TTGAAAGACCTGGACACAAATGCTCGAGGTCTTATTATCGCAGCTGTCTCACTCGGATCTTTTTGCTCATTCATC CCCGGATCTTACATCGCCGACAATCTGGGGCGGAGGATCTGCGTTCTGATCGGTTCCACTTTAGTGATCATCGCC TCGATTATCCAAGTCGCCACAAATAATCCGTGGGTCTTCTTCTTCGCTCGTGTTCTCGCTGGAATCGGAGTCGGA GTCTCACAAACTGCCGCGCCATTGCTCATTACCGAATCAACACACCCACGTCAACGACAGACCTTCACGGGTTTA TACAATGCACTTTGGTTCATCGGGTCGATCACGTCGGCTGGTATTGGTTTTGCTGGACTCACCATCGTAGGGAGT TGGTCATGGAAACTCCCCTGCTTGACGCAGATCTTCTATCCGGTCCTTCAATTGGTTGGGCTTTGCTTTGTTCCC GAGAGCCCGAGATGGCTGGTCTCCCGGGGCAGGAAAGATGAGGGAATGGCTATACTAGCAAGATATCACGCTAAT GGTGATGAGAACGACGAACTTGTTCAGGACGAATTCTACCAGATTTGCAAGAGCATCAATGCGGAGTCTGACAAG AGCTGCCGCCGCTGGAGCAGCTTCTTTGCATCCCGGAGCAACATGCATCGTCTATCCATTTGCGTGATTCTGGGA TTCATGCAAGAATGGTCTGGAAATGGTATGAACCTAAAATGTCCCTTTTATTCTAATCCGATTTCTAACCAACTT TTTCTAGGCGTGGTTTCTTATTACCTAGCCCCGATCCTAGCATCAGTCGGTATATACAACGCATCTCACCAGGCC GCCATCAATATCAGCTTGCAGGTGTGGAACCTGGCATTCGCAGTCGGCGGAGCAATGGCCGCAGACCGATACGGA CGACGAAAACTCTGGCTAATCGCCACAATGTTGATGTTCATCTACCTATCCGCCGCGACGACCATGTCGGGTCTT TTCCAAGAGATGCATGTGCTGGAGGCTGGTATTGCGGTGGTACCCATGCTTTTCCTCTTCTGCAGTGCTTACGAC ATGGCATATATGCCCTTGTTTATCGCATACCCAGCTGAAATCCTGCCCTTCCAGCTCCGCGCCAAGGGCCTTGCC ATCACACTCACCACCGACTCGATGGCTTGCTTCTTCAACCAGTATATAAACCCTGTGGCCTTGGCGGCCATCCAC TGGAAATACTTCCTGGTGTATCTGGGCTGTCTTGTGATTTTCATGGCAACGATCTACTTCCTCTTCCCGGAGACT AAAGGTCTGTCTTTGGAAGAGGTGGCGCGGATCTTTGAAAAGGACAAGGCTTACCAGGTGGAGAGGACACCTTCT GATGTTTCGCAAGAGCTGCTTGTGTTCCCCCAAAAGGGCAGCACCTCGTCGTGA |