© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g354.t1 |
| Gene name | |
| Location | scaffold_01:896655..898527 |
| Strand | + |
| Gene length (bp) | 1872 |
| Transcript length (bp) | 1755 |
| Coding sequence length (bp) | 1755 |
| Protein length (aa) | 585 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 2.5E-150 | 81 | 544 |
| PF13520 | AA_permease_2 | Amino acid permease | 3.9E-37 | 84 | 516 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 84 | 106 | 22 |
| 2 | 116 | 138 | 22 |
| 3 | 159 | 181 | 22 |
| 4 | 191 | 208 | 17 |
| 5 | 215 | 237 | 22 |
| 6 | 269 | 291 | 22 |
| 7 | 304 | 323 | 19 |
| 8 | 355 | 377 | 22 |
| 9 | 405 | 424 | 19 |
| 10 | 434 | 456 | 22 |
| 11 | 476 | 498 | 22 |
| 12 | 513 | 534 | 21 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g354.t1 MDEKKFEEHTVQTGSDAPPSYGDSSPTRGGMGQRIIDSFKRDPNHTVLGTPGADGTAMDVEAAAAHNTAHSPLQR HLKGRHLQMIAIGGSIGTGLFVGSGSVLAVGGPASVLIAYILIGCMLYCTVHALGEMAVLFPVAGSFAHYSTRFM DPAWGFAMGWNYALQWLIVLPLEIVAASITVDYWSPGVSNAAWVTIFWVVIVSINMFGVRGYGEAEFVFSIIKVV AVLGFIILGIILNCGGGPEGGYIGARYWYDPGAFRNGFKGLCSVFVNAAFAFAGTELVGLAAAETANPRKSLPTA VKQVFWRIALFYVVSLTLVGLLVRYDDPKLISGSSSADAKASPFVIAIENAGIKALPSIMNVVIMIAVLSVGNSS VYGSSRTLAALAEQGQAPKFLAYIDRKGRPLPAIIIASALGLLCYLAASDVQTTAFEWMMAISGLSSIFTWGSIC ASHILFRRAWKKQGHTLDELAFRSQPGVIGSWVGLTFNILVLIAQFWVGFAPIGYGEMTSQEIAYNFFSVYLAAP VVLVSYVGYKIYYRCKFVKSLEVDLDTGRRDLDVQHLVEQELAEQKEWPKWKKVYKFFC* |
| Coding | >Pro_DTO377G3_2|g354.t1 ATGGATGAGAAGAAGTTTGAGGAGCACACCGTCCAGACTGGATCGGATGCTCCCCCATCCTATGGCGACTCATCT CCAACGCGAGGAGGCATGGGCCAACGAATCATTGACAGCTTCAAGAGAGACCCCAACCACACTGTCCTCGGTACT CCTGGAGCTGATGGCACTGCCATGGATGTCGAGGCTGCCGCCGCCCATAACACTGCCCACTCACCACTGCAGCGA CACTTGAAGGGTCGTCATCTGCAGATGATTGCCATCGGTGGTTCTATCGGTACTGGTCTTTTCGTTGGTTCCGGA TCTGTTTTGGCCGTCGGTGGTCCAGCCTCAGTACTGATCGCTTATATTTTGATCGGATGCATGCTTTACTGTACA GTTCACGCCTTGGGCGAAATGGCTGTTCTTTTCCCCGTTGCCGGTTCTTTCGCCCACTATTCGACTCGTTTCATG GATCCTGCTTGGGGTTTCGCTATGGGCTGGAATTACGCTCTTCAGTGGCTCATTGTCCTACCCTTGGAGATTGTC GCTGCTTCCATCACAGTCGATTATTGGAGCCCAGGTGTTTCAAACGCTGCCTGGGTAACCATCTTCTGGGTTGTG ATTGTCTCAATCAACATGTTCGGTGTACGAGGATATGGTGAAGCCGAATTCGTCTTCTCCATCATCAAGGTCGTT GCCGTGCTTGGTTTCATTATCCTAGGAATCATCCTCAACTGCGGTGGTGGACCCGAAGGTGGATACATTGGTGCC AGGTACTGGTACGACCCAGGTGCATTCAGGAACGGTTTCAAGGGTCTCTGCAGTGTCTTCGTCAATGCTGCTTTC GCCTTCGCTGGAACCGAACTTGTTGGTCTTGCCGCCGCCGAGACCGCCAATCCTCGCAAGTCCCTCCCGACTGCC GTTAAGCAGGTCTTCTGGCGTATTGCTCTCTTCTACGTGGTTTCCCTTACCCTCGTCGGCCTTCTGGTGAGATAC GACGACCCGAAACTGATCAGCGGTTCCTCCTCCGCCGACGCCAAGGCCTCTCCTTTCGTCATTGCCATTGAGAAC GCAGGAATCAAGGCTCTGCCTTCCATCATGAACGTTGTGATCATGATTGCGGTCCTCTCTGTCGGTAACTCCTCC GTTTACGGTTCCTCGCGTACTCTTGCTGCCCTTGCCGAGCAAGGCCAAGCCCCCAAGTTCCTCGCCTACATCGAC CGCAAGGGTCGTCCTCTACCTGCCATTATTATTGCGTCTGCCTTGGGTCTGCTCTGCTACCTCGCCGCCTCCGAT GTGCAGACGACTGCCTTCGAATGGATGATGGCCATCTCGGGTCTGTCATCTATCTTCACCTGGGGTTCCATCTGT GCTTCCCACATCCTCTTCCGTCGCGCGTGGAAGAAACAGGGCCACACCTTGGATGAGCTTGCATTCCGTTCCCAG CCCGGTGTCATTGGCTCGTGGGTCGGTCTTACCTTCAACATTCTCGTGCTGATTGCCCAGTTCTGGGTTGGTTTC GCCCCCATTGGTTACGGAGAAATGACATCTCAGGAGATTGCCTACAATTTCTTCTCCGTCTACTTGGCCGCTCCC GTGGTTCTGGTTTCTTACGTCGGTTACAAGATCTATTACAGGTGCAAGTTTGTGAAATCCTTAGAGGTGGATTTG GACACCGGTCGTCGCGATCTTGATGTCCAGCATTTGGTTGAGCAGGAATTGGCCGAGCAAAAAGAATGGCCCAAG TGGAAGAAGGTTTACAAGTTCTTCTGTTAA |
| Transcript | >Pro_DTO377G3_2|g354.t1 ATGGATGAGAAGAAGTTTGAGGAGCACACCGTCCAGACTGGATCGGATGCTCCCCCATCCTATGGCGACTCATCT CCAACGCGAGGAGGCATGGGCCAACGAATCATTGACAGCTTCAAGAGAGACCCCAACCACACTGTCCTCGGTACT CCTGGAGCTGATGGCACTGCCATGGATGTCGAGGCTGCCGCCGCCCATAACACTGCCCACTCACCACTGCAGCGA CACTTGAAGGGTCGTCATCTGCAGATGATTGCCATCGGTGGTTCTATCGGTACTGGTCTTTTCGTTGGTTCCGGA TCTGTTTTGGCCGTCGGTGGTCCAGCCTCAGTACTGATCGCTTATATTTTGATCGGATGCATGCTTTACTGTACA GTTCACGCCTTGGGCGAAATGGCTGTTCTTTTCCCCGTTGCCGGTTCTTTCGCCCACTATTCGACTCGTTTCATG GATCCTGCTTGGGGTTTCGCTATGGGCTGGAATTACGCTCTTCAGTGGCTCATTGTCCTACCCTTGGAGATTGTC GCTGCTTCCATCACAGTCGATTATTGGAGCCCAGGTGTTTCAAACGCTGCCTGGGTAACCATCTTCTGGGTTGTG ATTGTCTCAATCAACATGTTCGGTGTACGAGGATATGGTGAAGCCGAATTCGTCTTCTCCATCATCAAGGTCGTT GCCGTGCTTGGTTTCATTATCCTAGGAATCATCCTCAACTGCGGTGGTGGACCCGAAGGTGGATACATTGGTGCC AGGTACTGGTACGACCCAGGTGCATTCAGGAACGGTTTCAAGGGTCTCTGCAGTGTCTTCGTCAATGCTGCTTTC GCCTTCGCTGGAACCGAACTTGTTGGTCTTGCCGCCGCCGAGACCGCCAATCCTCGCAAGTCCCTCCCGACTGCC GTTAAGCAGGTCTTCTGGCGTATTGCTCTCTTCTACGTGGTTTCCCTTACCCTCGTCGGCCTTCTGGTGAGATAC GACGACCCGAAACTGATCAGCGGTTCCTCCTCCGCCGACGCCAAGGCCTCTCCTTTCGTCATTGCCATTGAGAAC GCAGGAATCAAGGCTCTGCCTTCCATCATGAACGTTGTGATCATGATTGCGGTCCTCTCTGTCGGTAACTCCTCC GTTTACGGTTCCTCGCGTACTCTTGCTGCCCTTGCCGAGCAAGGCCAAGCCCCCAAGTTCCTCGCCTACATCGAC CGCAAGGGTCGTCCTCTACCTGCCATTATTATTGCGTCTGCCTTGGGTCTGCTCTGCTACCTCGCCGCCTCCGAT GTGCAGACGACTGCCTTCGAATGGATGATGGCCATCTCGGGTCTGTCATCTATCTTCACCTGGGGTTCCATCTGT GCTTCCCACATCCTCTTCCGTCGCGCGTGGAAGAAACAGGGCCACACCTTGGATGAGCTTGCATTCCGTTCCCAG CCCGGTGTCATTGGCTCGTGGGTCGGTCTTACCTTCAACATTCTCGTGCTGATTGCCCAGTTCTGGGTTGGTTTC GCCCCCATTGGTTACGGAGAAATGACATCTCAGGAGATTGCCTACAATTTCTTCTCCGTCTACTTGGCCGCTCCC GTGGTTCTGGTTTCTTACGTCGGTTACAAGATCTATTACAGGTGCAAGTTTGTGAAATCCTTAGAGGTGGATTTG GACACCGGTCGTCGCGATCTTGATGTCCAGCATTTGGTTGAGCAGGAATTGGCCGAGCAAAAAGAATGGCCCAAG TGGAAGAAGGTTTACAAGTTCTTCTGTTAA |
| Gene | >Pro_DTO377G3_2|g354.t1 ATGGATGAGAAGAAGTTTGAGGAGCACACCGTCCAGACTGGATCGGATGCTCCCCCATCCTATGGCGACTCATCT CCAACGCGAGGAGGCATGGGCCAACGAATCATTGACAGCTTCAAGAGAGACCCCAACCACACTGTCCTCGGTACT CCTGGAGCTGATGGCACTGCCATGGATGTCGAGGCTGCCGCCGCCCATAACACTGCCCACTCACCACTGCAGCGA CACTTGAAGGGTCGTCATCTGCAGATGATTGCCATCGGTGGTTCTATCGGTATGTTCTGCGCTGATTCGTCTCCA TCCTATTCGGTCTCGCTAATTACATTTACTATGTAGGTACTGGTCTTTTCGTTGGTTCCGGATCTGTTTTGGCCG TCGGTGGTCCAGCCTCAGTACTGATCGCTTATATTTTGATCGGATGCATGCTTTACTGTACAGTTCACGCCTTGG GCGAAATGGCTGTTCTTTTCCCCGTTGCCGGTTCTTTCGCCCACTATTCGACTCGTTTCATGGATCCTGCTTGGG GTTTCGCTATGGGCTGGAATTACGCTCTTCAGTGGCTCATTGTCCTACCCTTGGAGATTGTCGCTGCTTCCATCA CAGTCGATTATTGGAGCCCAGGTGTTTCAAACGCTGCCTGGGTAACCATCTTCTGGGTTGTGATTGTCTCAATCA ACATGTTCGGTGTACGAGGATATGGTGAAGCCGAATTCGTCTTCTCCATCATCAAGGTCGTTGCCGTGCTTGGTT TCATGTAAGCTACATTGCTGTTTGGCGAAACTTGAACGTCTAACTGACTTGACTATTAGTATCCTAGGAATCATC CTCAACTGCGGTGGTGGACCCGAAGGTGGATACATTGGTGCCAGGTACTGGTACGACCCAGGTGCATTCAGGAAC GGTTTCAAGGGTCTCTGCAGTGTCTTCGTCAATGCTGCTTTCGCCTTCGCTGGAACCGAACTTGTTGGTCTTGCC GCCGCCGAGACCGCCAATCCTCGCAAGTCCCTCCCGACTGCCGTTAAGCAGGTCTTCTGGCGTATTGCTCTCTTC TACGTGGTTTCCCTTACCCTCGTCGGCCTTCTGGTGAGATACGACGACCCGAAACTGATCAGCGGTTCCTCCTCC GCCGACGCCAAGGCCTCTCCTTTCGTCATTGCCATTGAGAACGCAGGAATCAAGGCTCTGCCTTCCATCATGAAC GTTGTGATCATGATTGCGGTCCTCTCTGTCGGTAACTCCTCCGTTTACGGTTCCTCGCGTACTCTTGCTGCCCTT GCCGAGCAAGGCCAAGCCCCCAAGTTCCTCGCCTACATCGACCGCAAGGGTCGTCCTCTACCTGCCATTATTATT GCGTCTGCCTTGGGTCTGCTCTGCTACCTCGCCGCCTCCGATGTGCAGACGACTGCCTTCGAATGGATGATGGCC ATCTCGGGTCTGTCATCTATCTTCACCTGGGGTTCCATCTGTGCTTCCCACATCCTCTTCCGTCGCGCGTGGAAG AAACAGGGCCACACCTTGGATGAGCTTGCATTCCGTTCCCAGCCCGGTGTCATTGGCTCGTGGGTCGGTCTTACC TTCAACATTCTCGTGCTGATTGCCCAGTTCTGGGTTGGTTTCGCCCCCATTGGTTACGGAGAAATGACATCTCAG GAGATTGCCTACAATTTCTTCTCCGTCTACTTGGCCGCTCCCGTGGTTCTGGTTTCTTACGTCGGTTACAAGATC TATTACAGGTGCAAGTTTGTGAAATCCTTAGAGGTGGATTTGGACACCGGTCGTCGCGATCTTGATGTCCAGCAT TTGGTTGAGCAGGAATTGGCCGAGCAAAAAGAATGGCCCAAGTGGAAGAAGGTTTACAAGTTCTTCTGTTAA |