Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3534.t1
Gene name
Locationscaffold_06:37447..38431
Strand-
Gene length (bp)984
Transcript length (bp)984
Coding sequence length (bp)984
Protein length (aa) 328

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.5

Transmembrane Domains

Domain # Start End Length
1 22 44 22
2 56 78 22
3 88 110 22
4 122 144 22
5 159 181 22
6 202 224 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3534.t1
MSLADIAGRNFTSPDRSGDQFAVHTVVACLIGIAWYNALELIVLCFTTFKRYGGCYFWCLLLASFSIIPFGMGYI
LIIFNVYDNMFPVAMELVAWVGMVTGQSLVLWSRLHLVCHSRTVLRVTLAMIIVDAIILHIPGAVLELGSHSNKS
SLFTDGFNIFERIQLVGFSIQEIILSIIYSWEAVRLLNLRPRGHYRGTLVQLLIVNVVMIMMDAAVIGVQYSGLF
DIHVTLKAMVYSVKLKLEYAILGKLVHITEGGSGSTPTDLSDFVDLSLHNPRTPRPDRDTIRENPENGSNTRVRV
PSKGSSTDPLRRSLSAHSPSSSNPDYS*
Coding >Pro_DTO377G3_2|g3534.t1
ATGTCCCTTGCCGACATTGCCGGCAGGAATTTCACCTCCCCTGATCGCTCCGGTGACCAATTCGCGGTGCATACT
GTAGTCGCCTGCCTCATCGGCATTGCCTGGTACAATGCCTTGGAATTGATCGTTCTGTGTTTCACCACCTTCAAG
AGATATGGCGGGTGCTATTTTTGGTGTCTCCTCCTTGCCTCCTTCAGTATAATTCCGTTTGGGATGGGATATATC
CTCATCATCTTCAATGTATACGACAACATGTTTCCCGTGGCGATGGAGCTAGTTGCGTGGGTTGGGATGGTAACG
GGCCAGTCCCTAGTCCTGTGGTCTCGATTGCATCTTGTCTGCCACAGCCGAACCGTGCTCCGCGTCACTCTCGCC
ATGATCATTGTTGACGCGATCATTCTCCACATCCCCGGGGCCGTCCTTGAGCTCGGTAGCCATTCGAACAAATCT
TCTCTCTTCACCGACGGGTTCAACATCTTCGAGCGCATCCAATTGGTCGGATTCTCCATACAAGAAATCATTCTC
TCCATTATCTACTCCTGGGAAGCTGTGCGACTACTGAATCTCCGCCCGAGAGGCCATTACCGAGGTACCCTGGTC
CAACTCTTGATCGTGAACGTAGTCATGATTATGATGGACGCCGCCGTTATCGGAGTACAATACTCTGGTCTCTTC
GATATCCATGTCACCCTCAAGGCCATGGTCTACAGCGTCAAGCTCAAGCTGGAATATGCGATCTTGGGCAAATTG
GTGCACATCACCGAGGGCGGCAGCGGCTCGACCCCGACCGACCTGTCGGATTTCGTGGATCTTTCCTTACATAAT
CCCCGCACCCCGCGACCGGATAGGGACACGATCAGAGAGAACCCAGAGAATGGCTCCAACACTCGGGTGCGAGTC
CCCTCCAAGGGCTCGTCTACTGATCCGCTACGAAGGAGTCTCTCCGCCCATAGTCCGAGTTCGAGTAACCCGGAC
TACTCTTGA
Transcript >Pro_DTO377G3_2|g3534.t1
ATGTCCCTTGCCGACATTGCCGGCAGGAATTTCACCTCCCCTGATCGCTCCGGTGACCAATTCGCGGTGCATACT
GTAGTCGCCTGCCTCATCGGCATTGCCTGGTACAATGCCTTGGAATTGATCGTTCTGTGTTTCACCACCTTCAAG
AGATATGGCGGGTGCTATTTTTGGTGTCTCCTCCTTGCCTCCTTCAGTATAATTCCGTTTGGGATGGGATATATC
CTCATCATCTTCAATGTATACGACAACATGTTTCCCGTGGCGATGGAGCTAGTTGCGTGGGTTGGGATGGTAACG
GGCCAGTCCCTAGTCCTGTGGTCTCGATTGCATCTTGTCTGCCACAGCCGAACCGTGCTCCGCGTCACTCTCGCC
ATGATCATTGTTGACGCGATCATTCTCCACATCCCCGGGGCCGTCCTTGAGCTCGGTAGCCATTCGAACAAATCT
TCTCTCTTCACCGACGGGTTCAACATCTTCGAGCGCATCCAATTGGTCGGATTCTCCATACAAGAAATCATTCTC
TCCATTATCTACTCCTGGGAAGCTGTGCGACTACTGAATCTCCGCCCGAGAGGCCATTACCGAGGTACCCTGGTC
CAACTCTTGATCGTGAACGTAGTCATGATTATGATGGACGCCGCCGTTATCGGAGTACAATACTCTGGTCTCTTC
GATATCCATGTCACCCTCAAGGCCATGGTCTACAGCGTCAAGCTCAAGCTGGAATATGCGATCTTGGGCAAATTG
GTGCACATCACCGAGGGCGGCAGCGGCTCGACCCCGACCGACCTGTCGGATTTCGTGGATCTTTCCTTACATAAT
CCCCGCACCCCGCGACCGGATAGGGACACGATCAGAGAGAACCCAGAGAATGGCTCCAACACTCGGGTGCGAGTC
CCCTCCAAGGGCTCGTCTACTGATCCGCTACGAAGGAGTCTCTCCGCCCATAGTCCGAGTTCGAGTAACCCGGAC
TACTCTTGA
Gene >Pro_DTO377G3_2|g3534.t1
ATGTCCCTTGCCGACATTGCCGGCAGGAATTTCACCTCCCCTGATCGCTCCGGTGACCAATTCGCGGTGCATACT
GTAGTCGCCTGCCTCATCGGCATTGCCTGGTACAATGCCTTGGAATTGATCGTTCTGTGTTTCACCACCTTCAAG
AGATATGGCGGGTGCTATTTTTGGTGTCTCCTCCTTGCCTCCTTCAGTATAATTCCGTTTGGGATGGGATATATC
CTCATCATCTTCAATGTATACGACAACATGTTTCCCGTGGCGATGGAGCTAGTTGCGTGGGTTGGGATGGTAACG
GGCCAGTCCCTAGTCCTGTGGTCTCGATTGCATCTTGTCTGCCACAGCCGAACCGTGCTCCGCGTCACTCTCGCC
ATGATCATTGTTGACGCGATCATTCTCCACATCCCCGGGGCCGTCCTTGAGCTCGGTAGCCATTCGAACAAATCT
TCTCTCTTCACCGACGGGTTCAACATCTTCGAGCGCATCCAATTGGTCGGATTCTCCATACAAGAAATCATTCTC
TCCATTATCTACTCCTGGGAAGCTGTGCGACTACTGAATCTCCGCCCGAGAGGCCATTACCGAGGTACCCTGGTC
CAACTCTTGATCGTGAACGTAGTCATGATTATGATGGACGCCGCCGTTATCGGAGTACAATACTCTGGTCTCTTC
GATATCCATGTCACCCTCAAGGCCATGGTCTACAGCGTCAAGCTCAAGCTGGAATATGCGATCTTGGGCAAATTG
GTGCACATCACCGAGGGCGGCAGCGGCTCGACCCCGACCGACCTGTCGGATTTCGTGGATCTTTCCTTACATAAT
CCCCGCACCCCGCGACCGGATAGGGACACGATCAGAGAGAACCCAGAGAATGGCTCCAACACTCGGGTGCGAGTC
CCCTCCAAGGGCTCGTCTACTGATCCGCTACGAAGGAGTCTCTCCGCCCATAGTCCGAGTTCGAGTAACCCGGAC
TACTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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