Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3516.t1
Gene name
Location	scaffold_05:874023..875645
Strand	-
Gene length (bp)	1622
Transcript length (bp)	1569
Coding sequence length (bp)	1569
Protein length (aa)	523

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00448	SRP54	SRP54-type protein, GTPase domain	5.0E-75	102	296
PF02978	SRP_SPB	Signal peptide binding domain	1.7E-29	329	429
PF02881	SRP54_N	SRP54-type protein, helical bundle domain	1.9E-19	6	83
PF02492	cobW	CobW/HypB/UreG, nucleotide-binding domain	7.6E-07	103	253

GO

GO Term	Description	Terminal node
GO:0008312	7S RNA binding	Yes
GO:0048500	signal recognition particle	Yes
GO:0005525	GTP binding	Yes
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	Yes
GO:0003723	RNA binding	No
GO:0006605	protein targeting	No
GO:0033365	protein localization to organelle	No
GO:0032991	protein-containing complex	No
GO:0005488	binding	No
GO:0006886	intracellular protein transport	No
GO:0051641	cellular localization	No
GO:0000166	nucleotide binding	No
GO:0051234	establishment of localization	No
GO:0003676	nucleic acid binding	No
GO:0005575	cellular_component	No
GO:0015031	protein transport	No
GO:0036094	small molecule binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0017076	purine nucleotide binding	No
GO:0006613	cotranslational protein targeting to membrane	No
GO:0008150	biological_process	No
GO:0006810	transport	No
GO:0043167	ion binding	No
GO:0046907	intracellular transport	No
GO:0006612	protein targeting to membrane	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032553	ribonucleotide binding	No
GO:0051179	localization	No
GO:1901265	nucleoside phosphate binding	No
GO:0072657	protein localization to membrane	No
GO:0009987	cellular process	No
GO:0051668	localization within membrane	No
GO:0070972	protein localization to endoplasmic reticulum	No
GO:0033036	macromolecule localization	No
GO:0043168	anion binding	No
GO:1901363	heterocyclic compound binding	No
GO:1990904	ribonucleoprotein complex	No
GO:0071705	nitrogen compound transport	No
GO:0008104	protein localization	No
GO:0072599	establishment of protein localization to endoplasmic reticulum	No
GO:0071702	organic substance transport	No
GO:0032555	purine ribonucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:0019001	guanyl nucleotide binding	No
GO:0051649	establishment of localization in cell	No
GO:0032561	guanyl ribonucleotide binding	No
GO:0045047	protein targeting to ER	No
GO:0090150	establishment of protein localization to membrane	No
GO:0072594	establishment of protein localization to organelle	No
GO:0070727	cellular macromolecule localization	No
GO:0003674	molecular_function	No
GO:0045184	establishment of protein localization	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 67	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3516.t1 MVLQDLGRRINSAVNDLTRSSNLDEKAFDDMLKEICAALLSADVNVRLVGTLRKSIKASVNFASLPAAVNKKRLI QKTVFDELVKLVDPRADSFRPKKGRSNVIMFVGLQGAGKTTTCTKLARHYQTRGFKTALVCADTFRAGAFDQLKQ NATKAKIPYYGSLTQTDPAVVAAEGVAKFKKERFDIIIVDTSGRHRQEEELFTEMTQIQNAVTPDQTILVLDSTI GQSAEAQSAAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIFLGTGEHMMDLERFEPRAFVQKLLGMGDV AGLVEHVQAMTKDSAGAKETYKHIAEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSNMTQGLDDEDGSLKLRR MVYIFDSMTVAELDGDGKNFVEQPSRMVRIAHGSGTSVREVEDVLSQHRMMAGMAKRVGGQKKQMQQAQNMMKGG NKNQQMAAMQKRMASMGGAGGGGMPGMPDMAKMMQMMGGGGGGMPDMQSLMSQMGGLMGGMGGGGGGRGRGR*
Coding	>Pro_DTO377G3_2\|g3516.t1 ATGGTTCTTCAAGACCTTGGGCGGCGAATCAACTCCGCTGTCAATGACCTGACGAGGTCCAGTAACCTCGATGAG AAGGCCTTCGATGACATGCTCAAAGAAATTTGCGCCGCTCTTCTTTCCGCCGATGTCAACGTCCGTCTCGTTGGA ACCCTACGCAAATCGATCAAGGCTAGCGTAAACTTCGCATCGCTCCCAGCCGCAGTGAACAAGAAGCGACTGATC CAGAAGACCGTCTTCGACGAGCTCGTAAAATTGGTGGACCCGCGTGCAGACTCCTTCCGGCCGAAGAAGGGTCGC TCCAATGTGATCATGTTCGTCGGTTTGCAGGGTGCGGGTAAGACAACAACGTGTACAAAGCTGGCTCGGCACTAC CAGACGCGAGGATTCAAAACAGCGCTGGTTTGCGCAGATACCTTCCGTGCCGGTGCTTTTGATCAGCTGAAACAG AACGCTACCAAGGCCAAGATCCCATACTATGGTAGTCTGACGCAGACGGATCCTGCTGTCGTGGCCGCGGAGGGT GTGGCCAAGTTTAAGAAAGAGCGTTTCGATATCATCATTGTCGATACCAGTGGTCGCCACCGACAAGAGGAGGAG CTCTTCACGGAAATGACACAAATTCAGAATGCTGTAACACCAGATCAGACTATTCTCGTGCTCGACAGCACAATT GGTCAATCTGCCGAGGCTCAGTCCGCTGCGTTCAAGGCAACGGCAGACTTTGGAGCTATTATTATTACCAAGACT GACGGTCATGCCGCCGGTGGTGGTGCCATTTCCGCTGTCGCCGCGACGCACACTCCTATTATCTTCCTTGGTACT GGTGAGCACATGATGGACCTAGAGCGATTCGAGCCCCGCGCGTTTGTTCAGAAGCTACTAGGCATGGGCGATGTC GCCGGGCTGGTCGAGCATGTACAGGCCATGACAAAGGATTCCGCGGGTGCCAAGGAGACATACAAGCACATTGCG GAAGGTATCTACACTCTGCGCGACTTCCGGGAGAACATCACCTCAATCATGAAGATGGGCCCGCTGTCTAAATTG TCCGGCATGATTCCCGGTCTGTCTAACATGACCCAGGGTCTGGATGACGAGGACGGCTCACTGAAGCTGCGCCGC ATGGTCTACATCTTCGACAGCATGACTGTAGCCGAGCTGGATGGCGACGGCAAGAACTTCGTCGAGCAGCCTAGC CGCATGGTCCGCATCGCGCACGGCAGCGGAACCAGCGTCCGTGAAGTTGAGGACGTGCTCTCCCAGCACCGCATG ATGGCCGGCATGGCCAAGCGTGTTGGCGGCCAGAAGAAGCAGATGCAACAAGCTCAGAACATGATGAAGGGCGGA AACAAGAACCAGCAGATGGCTGCCATGCAGAAGCGCATGGCGTCGATGGGCGGTGCCGGCGGCGGTGGCATGCCC GGTATGCCCGATATGGCCAAGATGATGCAGATGATGGGAGGTGGCGGTGGCGGCATGCCGGATATGCAGAGCCTA ATGAGCCAAATGGGCGGGTTGATGGGTGGAATGGGAGGAGGTGGTGGTGGACGTGGAAGAGGACGTTAA
Transcript	>Pro_DTO377G3_2\|g3516.t1 ATGGTTCTTCAAGACCTTGGGCGGCGAATCAACTCCGCTGTCAATGACCTGACGAGGTCCAGTAACCTCGATGAG AAGGCCTTCGATGACATGCTCAAAGAAATTTGCGCCGCTCTTCTTTCCGCCGATGTCAACGTCCGTCTCGTTGGA ACCCTACGCAAATCGATCAAGGCTAGCGTAAACTTCGCATCGCTCCCAGCCGCAGTGAACAAGAAGCGACTGATC CAGAAGACCGTCTTCGACGAGCTCGTAAAATTGGTGGACCCGCGTGCAGACTCCTTCCGGCCGAAGAAGGGTCGC TCCAATGTGATCATGTTCGTCGGTTTGCAGGGTGCGGGTAAGACAACAACGTGTACAAAGCTGGCTCGGCACTAC CAGACGCGAGGATTCAAAACAGCGCTGGTTTGCGCAGATACCTTCCGTGCCGGTGCTTTTGATCAGCTGAAACAG AACGCTACCAAGGCCAAGATCCCATACTATGGTAGTCTGACGCAGACGGATCCTGCTGTCGTGGCCGCGGAGGGT GTGGCCAAGTTTAAGAAAGAGCGTTTCGATATCATCATTGTCGATACCAGTGGTCGCCACCGACAAGAGGAGGAG CTCTTCACGGAAATGACACAAATTCAGAATGCTGTAACACCAGATCAGACTATTCTCGTGCTCGACAGCACAATT GGTCAATCTGCCGAGGCTCAGTCCGCTGCGTTCAAGGCAACGGCAGACTTTGGAGCTATTATTATTACCAAGACT GACGGTCATGCCGCCGGTGGTGGTGCCATTTCCGCTGTCGCCGCGACGCACACTCCTATTATCTTCCTTGGTACT GGTGAGCACATGATGGACCTAGAGCGATTCGAGCCCCGCGCGTTTGTTCAGAAGCTACTAGGCATGGGCGATGTC GCCGGGCTGGTCGAGCATGTACAGGCCATGACAAAGGATTCCGCGGGTGCCAAGGAGACATACAAGCACATTGCG GAAGGTATCTACACTCTGCGCGACTTCCGGGAGAACATCACCTCAATCATGAAGATGGGCCCGCTGTCTAAATTG TCCGGCATGATTCCCGGTCTGTCTAACATGACCCAGGGTCTGGATGACGAGGACGGCTCACTGAAGCTGCGCCGC ATGGTCTACATCTTCGACAGCATGACTGTAGCCGAGCTGGATGGCGACGGCAAGAACTTCGTCGAGCAGCCTAGC CGCATGGTCCGCATCGCGCACGGCAGCGGAACCAGCGTCCGTGAAGTTGAGGACGTGCTCTCCCAGCACCGCATG ATGGCCGGCATGGCCAAGCGTGTTGGCGGCCAGAAGAAGCAGATGCAACAAGCTCAGAACATGATGAAGGGCGGA AACAAGAACCAGCAGATGGCTGCCATGCAGAAGCGCATGGCGTCGATGGGCGGTGCCGGCGGCGGTGGCATGCCC GGTATGCCCGATATGGCCAAGATGATGCAGATGATGGGAGGTGGCGGTGGCGGCATGCCGGATATGCAGAGCCTA ATGAGCCAAATGGGCGGGTTGATGGGTGGAATGGGAGGAGGTGGTGGTGGACGTGGAAGAGGACGTTAA
Gene	>Pro_DTO377G3_2\|g3516.t1 ATGGTTCTTCAAGACCTTGGGCGGCGAATCAACTCCGCTGTCAATGACCTGACGAGGTCCAGTAACCTCGATGAG AAGGTATGCTATGTGTCCAGTGTGGCCCATAAGCCAGCCCGCTAATATAACAACAGGCCTTCGATGACATGCTCA AAGAAATTTGCGCCGCTCTTCTTTCCGCCGATGTCAACGTCCGTCTCGTTGGAACCCTACGCAAATCGATCAAGG CTAGCGTAAACTTCGCATCGCTCCCAGCCGCAGTGAACAAGAAGCGACTGATCCAGAAGACCGTCTTCGACGAGC TCGTAAAATTGGTGGACCCGCGTGCAGACTCCTTCCGGCCGAAGAAGGGTCGCTCCAATGTGATCATGTTCGTCG GTTTGCAGGGTGCGGGTAAGACAACAACGTGTACAAAGCTGGCTCGGCACTACCAGACGCGAGGATTCAAAACAG CGCTGGTTTGCGCAGATACCTTCCGTGCCGGTGCTTTTGATCAGCTGAAACAGAACGCTACCAAGGCCAAGATCC CATACTATGGTAGTCTGACGCAGACGGATCCTGCTGTCGTGGCCGCGGAGGGTGTGGCCAAGTTTAAGAAAGAGC GTTTCGATATCATCATTGTCGATACCAGTGGTCGCCACCGACAAGAGGAGGAGCTCTTCACGGAAATGACACAAA TTCAGAATGCTGTAACACCAGATCAGACTATTCTCGTGCTCGACAGCACAATTGGTCAATCTGCCGAGGCTCAGT CCGCTGCGTTCAAGGCAACGGCAGACTTTGGAGCTATTATTATTACCAAGACTGACGGTCATGCCGCCGGTGGTG GTGCCATTTCCGCTGTCGCCGCGACGCACACTCCTATTATCTTCCTTGGTACTGGTGAGCACATGATGGACCTAG AGCGATTCGAGCCCCGCGCGTTTGTTCAGAAGCTACTAGGCATGGGCGATGTCGCCGGGCTGGTCGAGCATGTAC AGGCCATGACAAAGGATTCCGCGGGTGCCAAGGAGACATACAAGCACATTGCGGAAGGTATCTACACTCTGCGCG ACTTCCGGGAGAACATCACCTCAATCATGAAGATGGGCCCGCTGTCTAAATTGTCCGGCATGATTCCCGGTCTGT CTAACATGACCCAGGGTCTGGATGACGAGGACGGCTCACTGAAGCTGCGCCGCATGGTCTACATCTTCGACAGCA TGACTGTAGCCGAGCTGGATGGCGACGGCAAGAACTTCGTCGAGCAGCCTAGCCGCATGGTCCGCATCGCGCACG GCAGCGGAACCAGCGTCCGTGAAGTTGAGGACGTGCTCTCCCAGCACCGCATGATGGCCGGCATGGCCAAGCGTG TTGGCGGCCAGAAGAAGCAGATGCAACAAGCTCAGAACATGATGAAGGGCGGAAACAAGAACCAGCAGATGGCTG CCATGCAGAAGCGCATGGCGTCGATGGGCGGTGCCGGCGGCGGTGGCATGCCCGGTATGCCCGATATGGCCAAGA TGATGCAGATGATGGGAGGTGGCGGTGGCGGCATGCCGGATATGCAGAGCCTAATGAGCCAAATGGGCGGGTTGA TGGGTGGAATGGGAGGAGGTGGTGGTGGACGTGGAAGAGGACGTTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences