Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3515.t1
Gene name
Locationscaffold_05:871815..873327
Strand+
Gene length (bp)1512
Transcript length (bp)1512
Coding sequence length (bp)1512
Protein length (aa) 504

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10297 Hap4_Hap_bind Minimal binding motif of Hap4 for binding to Hap2/3/5 2.8E-08 38 54

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0003677 DNA binding Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:1901363 heterocyclic compound binding No
GO:0051252 regulation of RNA metabolic process No
GO:2000112 regulation of cellular macromolecule biosynthetic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0050794 regulation of cellular process No
GO:0097159 organic cyclic compound binding No
GO:0031326 regulation of cellular biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0065007 biological regulation No
GO:0043227 membrane-bounded organelle No
GO:0050789 regulation of biological process No
GO:0044464 cell part No
GO:0043231 intracellular membrane-bounded organelle No
GO:0043226 organelle No
GO:0009889 regulation of biosynthetic process No
GO:0043229 intracellular organelle No
GO:0005575 cellular_component No
GO:0031323 regulation of cellular metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:2001141 regulation of RNA biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0044424 intracellular part No
GO:0005488 binding No
GO:0019222 regulation of metabolic process No
GO:0010468 regulation of gene expression No
GO:0010556 regulation of macromolecule biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3515.t1
MAPAPAGVSALALAPAPTLAARPSVAPSPGPGTPGSITSREWVIPPRPKPGRKPATDTPPTKRKAQNRAAQRAFR
ERRAARVSELEEQMKEIEDSHEIQVASLQQQIGNLSGEIDQCREEMGWWRDRCHALEKEVSIERSAKETLVKEFR
SSFAGPSVSKPAPVPDSVPLPPRKTKSSRMEDVQPTSTERNKEDSQMSIPPGCNNCSNAHCQCIEDAFGMQIDTH
ESSRSRHSPHGVGSPERDHRDPHIKPDPEEMEIDFTAQFSSVPTQSHDNDVSSPPVDPCGFCQDGTPCICAEMAA
QEQQRVRNINTFETNRLAPIQSISQFTPPPSEGDVRSEVTLPPISQATNSCANGPGTCAQCQSDPRSTLFCKTLA
ASRSASGTPSGGGCCGGGGKDGGCCMSRNAPATAPKPRNNAPMPSQPPAPKPAPPSELTLSCADAFTTLSRHPNF
SRATDEISTWLPKLHTLPDPREIAPPGSRAALEVEAASVMGVLRYFDRRFAEK*
Coding >Pro_DTO377G3_2|g3515.t1
ATGGCACCTGCTCCAGCTGGGGTTTCTGCACTGGCCCTCGCACCGGCGCCCACGCTAGCCGCCAGGCCCTCTGTA
GCCCCATCTCCAGGCCCGGGTACCCCCGGCTCCATCACCTCGCGAGAATGGGTAATCCCACCACGTCCCAAGCCT
GGTCGCAAGCCAGCTACAGATACACCGCCAACCAAACGCAAAGCTCAGAACCGAGCAGCTCAACGAGCGTTCCGT
GAGCGCCGGGCCGCCCGTGTTAGTGAACTGGAAGAGCAAATGAAAGAAATTGAAGATAGCCACGAGATCCAAGTC
GCCTCGCTCCAACAGCAAATTGGAAACCTCTCTGGTGAGATTGATCAATGCCGTGAAGAGATGGGATGGTGGCGC
GACCGGTGTCACGCCTTAGAGAAGGAAGTATCGATCGAGCGCAGCGCAAAGGAAACCCTTGTCAAGGAGTTCCGG
TCATCTTTCGCTGGCCCTAGTGTCAGCAAGCCTGCGCCCGTTCCGGACTCTGTTCCCTTGCCACCTCGTAAGACC
AAAAGCTCCCGAATGGAGGATGTTCAGCCTACAAGTACCGAACGCAACAAGGAAGATAGCCAGATGAGTATACCT
CCGGGGTGCAACAACTGCTCCAACGCCCACTGCCAGTGCATTGAAGATGCATTTGGCATGCAAATTGATACCCAT
GAGTCGTCTCGTTCTAGACACTCACCTCATGGCGTTGGCAGCCCGGAACGAGATCATAGGGATCCCCACATCAAG
CCCGATCCGGAAGAGATGGAAATCGACTTTACCGCTCAGTTTTCTAGCGTTCCAACCCAGTCTCACGACAACGAT
GTTTCTTCGCCTCCCGTTGATCCCTGCGGGTTCTGCCAAGACGGCACTCCCTGCATCTGCGCCGAAATGGCCGCA
CAGGAGCAGCAACGTGTACGCAACATCAATACATTTGAGACCAATCGTCTCGCACCGATTCAATCCATCTCCCAA
TTCACCCCGCCACCATCCGAGGGAGACGTCCGCTCAGAAGTGACCCTCCCACCTATCAGCCAAGCGACTAATTCC
TGTGCCAACGGTCCAGGCACCTGCGCCCAGTGCCAGTCCGACCCCCGAAGCACTCTTTTTTGCAAGACGTTGGCA
GCCTCCCGGTCAGCGAGCGGCACTCCATCGGGAGGAGGCTGCTGCGGAGGCGGAGGAAAGGACGGTGGATGCTGC
ATGTCGAGAAATGCCCCCGCCACCGCGCCCAAGCCGCGTAACAACGCCCCCATGCCTTCGCAACCTCCTGCACCC
AAGCCCGCTCCGCCATCAGAGCTAACACTCAGCTGTGCTGACGCCTTTACCACCCTCTCCCGTCACCCGAACTTC
TCCCGCGCCACCGACGAAATCTCAACCTGGCTGCCGAAGCTCCACACCCTCCCCGATCCCCGCGAAATCGCTCCC
CCTGGCAGCCGCGCTGCCCTGGAAGTTGAGGCTGCAAGCGTCATGGGTGTGCTCCGATACTTCGACCGTCGCTTC
GCCGAAAAATAA
Transcript >Pro_DTO377G3_2|g3515.t1
ATGGCACCTGCTCCAGCTGGGGTTTCTGCACTGGCCCTCGCACCGGCGCCCACGCTAGCCGCCAGGCCCTCTGTA
GCCCCATCTCCAGGCCCGGGTACCCCCGGCTCCATCACCTCGCGAGAATGGGTAATCCCACCACGTCCCAAGCCT
GGTCGCAAGCCAGCTACAGATACACCGCCAACCAAACGCAAAGCTCAGAACCGAGCAGCTCAACGAGCGTTCCGT
GAGCGCCGGGCCGCCCGTGTTAGTGAACTGGAAGAGCAAATGAAAGAAATTGAAGATAGCCACGAGATCCAAGTC
GCCTCGCTCCAACAGCAAATTGGAAACCTCTCTGGTGAGATTGATCAATGCCGTGAAGAGATGGGATGGTGGCGC
GACCGGTGTCACGCCTTAGAGAAGGAAGTATCGATCGAGCGCAGCGCAAAGGAAACCCTTGTCAAGGAGTTCCGG
TCATCTTTCGCTGGCCCTAGTGTCAGCAAGCCTGCGCCCGTTCCGGACTCTGTTCCCTTGCCACCTCGTAAGACC
AAAAGCTCCCGAATGGAGGATGTTCAGCCTACAAGTACCGAACGCAACAAGGAAGATAGCCAGATGAGTATACCT
CCGGGGTGCAACAACTGCTCCAACGCCCACTGCCAGTGCATTGAAGATGCATTTGGCATGCAAATTGATACCCAT
GAGTCGTCTCGTTCTAGACACTCACCTCATGGCGTTGGCAGCCCGGAACGAGATCATAGGGATCCCCACATCAAG
CCCGATCCGGAAGAGATGGAAATCGACTTTACCGCTCAGTTTTCTAGCGTTCCAACCCAGTCTCACGACAACGAT
GTTTCTTCGCCTCCCGTTGATCCCTGCGGGTTCTGCCAAGACGGCACTCCCTGCATCTGCGCCGAAATGGCCGCA
CAGGAGCAGCAACGTGTACGCAACATCAATACATTTGAGACCAATCGTCTCGCACCGATTCAATCCATCTCCCAA
TTCACCCCGCCACCATCCGAGGGAGACGTCCGCTCAGAAGTGACCCTCCCACCTATCAGCCAAGCGACTAATTCC
TGTGCCAACGGTCCAGGCACCTGCGCCCAGTGCCAGTCCGACCCCCGAAGCACTCTTTTTTGCAAGACGTTGGCA
GCCTCCCGGTCAGCGAGCGGCACTCCATCGGGAGGAGGCTGCTGCGGAGGCGGAGGAAAGGACGGTGGATGCTGC
ATGTCGAGAAATGCCCCCGCCACCGCGCCCAAGCCGCGTAACAACGCCCCCATGCCTTCGCAACCTCCTGCACCC
AAGCCCGCTCCGCCATCAGAGCTAACACTCAGCTGTGCTGACGCCTTTACCACCCTCTCCCGTCACCCGAACTTC
TCCCGCGCCACCGACGAAATCTCAACCTGGCTGCCGAAGCTCCACACCCTCCCCGATCCCCGCGAAATCGCTCCC
CCTGGCAGCCGCGCTGCCCTGGAAGTTGAGGCTGCAAGCGTCATGGGTGTGCTCCGATACTTCGACCGTCGCTTC
GCCGAAAAATAA
Gene >Pro_DTO377G3_2|g3515.t1
ATGGCACCTGCTCCAGCTGGGGTTTCTGCACTGGCCCTCGCACCGGCGCCCACGCTAGCCGCCAGGCCCTCTGTA
GCCCCATCTCCAGGCCCGGGTACCCCCGGCTCCATCACCTCGCGAGAATGGGTAATCCCACCACGTCCCAAGCCT
GGTCGCAAGCCAGCTACAGATACACCGCCAACCAAACGCAAAGCTCAGAACCGAGCAGCTCAACGAGCGTTCCGT
GAGCGCCGGGCCGCCCGTGTTAGTGAACTGGAAGAGCAAATGAAAGAAATTGAAGATAGCCACGAGATCCAAGTC
GCCTCGCTCCAACAGCAAATTGGAAACCTCTCTGGTGAGATTGATCAATGCCGTGAAGAGATGGGATGGTGGCGC
GACCGGTGTCACGCCTTAGAGAAGGAAGTATCGATCGAGCGCAGCGCAAAGGAAACCCTTGTCAAGGAGTTCCGG
TCATCTTTCGCTGGCCCTAGTGTCAGCAAGCCTGCGCCCGTTCCGGACTCTGTTCCCTTGCCACCTCGTAAGACC
AAAAGCTCCCGAATGGAGGATGTTCAGCCTACAAGTACCGAACGCAACAAGGAAGATAGCCAGATGAGTATACCT
CCGGGGTGCAACAACTGCTCCAACGCCCACTGCCAGTGCATTGAAGATGCATTTGGCATGCAAATTGATACCCAT
GAGTCGTCTCGTTCTAGACACTCACCTCATGGCGTTGGCAGCCCGGAACGAGATCATAGGGATCCCCACATCAAG
CCCGATCCGGAAGAGATGGAAATCGACTTTACCGCTCAGTTTTCTAGCGTTCCAACCCAGTCTCACGACAACGAT
GTTTCTTCGCCTCCCGTTGATCCCTGCGGGTTCTGCCAAGACGGCACTCCCTGCATCTGCGCCGAAATGGCCGCA
CAGGAGCAGCAACGTGTACGCAACATCAATACATTTGAGACCAATCGTCTCGCACCGATTCAATCCATCTCCCAA
TTCACCCCGCCACCATCCGAGGGAGACGTCCGCTCAGAAGTGACCCTCCCACCTATCAGCCAAGCGACTAATTCC
TGTGCCAACGGTCCAGGCACCTGCGCCCAGTGCCAGTCCGACCCCCGAAGCACTCTTTTTTGCAAGACGTTGGCA
GCCTCCCGGTCAGCGAGCGGCACTCCATCGGGAGGAGGCTGCTGCGGAGGCGGAGGAAAGGACGGTGGATGCTGC
ATGTCGAGAAATGCCCCCGCCACCGCGCCCAAGCCGCGTAACAACGCCCCCATGCCTTCGCAACCTCCTGCACCC
AAGCCCGCTCCGCCATCAGAGCTAACACTCAGCTGTGCTGACGCCTTTACCACCCTCTCCCGTCACCCGAACTTC
TCCCGCGCCACCGACGAAATCTCAACCTGGCTGCCGAAGCTCCACACCCTCCCCGATCCCCGCGAAATCGCTCCC
CCTGGCAGCCGCGCTGCCCTGGAAGTTGAGGCTGCAAGCGTCATGGGTGTGCTCCGATACTTCGACCGTCGCTTC
GCCGAAAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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