Protein ID | Pro_DTO377G3_2|g350.t1 |
Gene name | |
Location | scaffold_01:883979..885471 |
Strand | - |
Gene length (bp) | 1492 |
Transcript length (bp) | 1212 |
Coding sequence length (bp) | 1212 |
Protein length (aa) | 404 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03124 | EXS | EXS family | 2.7E-98 | 16 | 380 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 34 | 22 |
2 | 67 | 89 | 22 |
3 | 102 | 119 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g350.t1 MAVDQHAQLDAFGLIFPLPLRIAAILVAGFWGWGLNLQYLAKANIDVPALIKYPARTSSSQRPHHIAVYRLATCF TIPLALWFIVFWVVTRRAPELVERLDWLPQSVYIVLLLILIWPFNRASRSGRIRFLLTLKRISIGGLAESKDGKF GDILLADALTSYARVIGDLYISFCMFFTDGFAATSKPNRACGSEIVVPIILAVPSLIRLRQCLTEYYRARRTVTR RETRKLNQHLANALKYASAFPVIWIASKMRNYNPLELRGYSEVSMMRLLFLVSFINSGYSFWWDVVKDWDMTLFS SESRDSSHPYGLRRHRYFGSDKMYHYVIIADLALRFSWLWRIVPGLGWISETESGLWILMFLEVVRRWMWVFFRT EAEWIRNTHGPGPDDVLLGEYNHKFDAD* |
Coding | >Pro_DTO377G3_2|g350.t1 ATGGCAGTTGATCAACATGCTCAATTGGATGCCTTTGGGCTGATCTTCCCTTTACCGCTACGTATAGCTGCTATC TTGGTCGCTGGTTTCTGGGGATGGGGACTCAACCTTCAATACTTGGCAAAAGCCAACATCGACGTCCCGGCGCTC ATCAAATATCCTGCCCGCACATCCTCCTCGCAACGCCCACATCACATCGCCGTCTACCGCCTGGCCACATGTTTT ACTATCCCACTTGCTCTGTGGTTCATCGTCTTTTGGGTAGTCACTCGCCGAGCCCCTGAATTGGTTGAGCGACTG GACTGGCTCCCGCAGTCGGTGTACATCGTTCTCCTCCTTATTCTGATCTGGCCTTTCAACCGCGCCTCCCGCTCC GGTCGAATCCGTTTTCTCCTTACCCTCAAGCGGATCAGTATTGGCGGTCTGGCCGAGTCGAAGGATGGCAAGTTT GGTGACATTCTGCTGGCAGATGCCCTCACTAGCTATGCTCGCGTGATCGGAGATCTGTATATCAGCTTCTGCATG TTCTTCACCGATGGCTTCGCCGCTACTTCCAAGCCCAACCGGGCCTGTGGAAGTGAAATCGTCGTTCCGATCATC CTCGCTGTTCCTAGCTTGATTCGTCTTCGTCAGTGTTTGACTGAATATTATCGTGCGCGGCGGACAGTCACCCGG AGAGAGACGCGCAAGTTAAACCAGCACTTGGCCAACGCTCTCAAGTATGCAAGTGCGTTCCCGGTCATTTGGATA GCCTCCAAAATGCGCAACTACAATCCATTGGAGCTACGTGGATATAGCGAGGTTAGCATGATGCGCCTTCTGTTT CTCGTCTCTTTTATCAACTCCGGCTACTCTTTCTGGTGGGATGTCGTCAAGGATTGGGATATGACTCTATTTTCC TCGGAATCTCGCGACAGCAGCCATCCATATGGACTCCGCCGGCATCGTTACTTCGGATCTGACAAGATGTACCAC TACGTCATTATCGCGGATCTGGCGCTTCGTTTCTCATGGCTATGGCGCATTGTCCCAGGCCTCGGCTGGATTTCG GAGACTGAAAGCGGATTATGGATACTCATGTTCCTCGAAGTTGTACGACGTTGGATGTGGGTGTTCTTCCGGACG GAAGCTGAATGGATTCGAAATACCCATGGCCCGGGCCCAGATGACGTCCTTCTCGGAGAATACAACCATAAATTC GACGCGGACTAA |
Transcript | >Pro_DTO377G3_2|g350.t1 ATGGCAGTTGATCAACATGCTCAATTGGATGCCTTTGGGCTGATCTTCCCTTTACCGCTACGTATAGCTGCTATC TTGGTCGCTGGTTTCTGGGGATGGGGACTCAACCTTCAATACTTGGCAAAAGCCAACATCGACGTCCCGGCGCTC ATCAAATATCCTGCCCGCACATCCTCCTCGCAACGCCCACATCACATCGCCGTCTACCGCCTGGCCACATGTTTT ACTATCCCACTTGCTCTGTGGTTCATCGTCTTTTGGGTAGTCACTCGCCGAGCCCCTGAATTGGTTGAGCGACTG GACTGGCTCCCGCAGTCGGTGTACATCGTTCTCCTCCTTATTCTGATCTGGCCTTTCAACCGCGCCTCCCGCTCC GGTCGAATCCGTTTTCTCCTTACCCTCAAGCGGATCAGTATTGGCGGTCTGGCCGAGTCGAAGGATGGCAAGTTT GGTGACATTCTGCTGGCAGATGCCCTCACTAGCTATGCTCGCGTGATCGGAGATCTGTATATCAGCTTCTGCATG TTCTTCACCGATGGCTTCGCCGCTACTTCCAAGCCCAACCGGGCCTGTGGAAGTGAAATCGTCGTTCCGATCATC CTCGCTGTTCCTAGCTTGATTCGTCTTCGTCAGTGTTTGACTGAATATTATCGTGCGCGGCGGACAGTCACCCGG AGAGAGACGCGCAAGTTAAACCAGCACTTGGCCAACGCTCTCAAGTATGCAAGTGCGTTCCCGGTCATTTGGATA GCCTCCAAAATGCGCAACTACAATCCATTGGAGCTACGTGGATATAGCGAGGTTAGCATGATGCGCCTTCTGTTT CTCGTCTCTTTTATCAACTCCGGCTACTCTTTCTGGTGGGATGTCGTCAAGGATTGGGATATGACTCTATTTTCC TCGGAATCTCGCGACAGCAGCCATCCATATGGACTCCGCCGGCATCGTTACTTCGGATCTGACAAGATGTACCAC TACGTCATTATCGCGGATCTGGCGCTTCGTTTCTCATGGCTATGGCGCATTGTCCCAGGCCTCGGCTGGATTTCG GAGACTGAAAGCGGATTATGGATACTCATGTTCCTCGAAGTTGTACGACGTTGGATGTGGGTGTTCTTCCGGACG GAAGCTGAATGGATTCGAAATACCCATGGCCCGGGCCCAGATGACGTCCTTCTCGGAGAATACAACCATAAATTC GACGCGGACTAA |
Gene | >Pro_DTO377G3_2|g350.t1 ATGGCAGTTGATCAACATGCTCAATTGGATGCCTTTGGGCTGATCTTCCCTTTACCGCTACGTATAGCTGCTATC TTGGTCGCTGGTAGGTGACATTCCTGTCCGATCGGGTTCGGTCCCGAGTGTGCTAACACAAGGAGCTAGGTTTCT GGGGATGGGGACTCAACCTTCAATACTTGGCAAAAGCCAACATCGTGAGTGACGCCCCTCACCTAGCCAGCGTAT TCCCGACGGCTGATCAGATTCCCATACTTCCAGGACGTCCCGGCGCTCATCAAATATCCTGCCCGCACATCCTCC TCGCAACGCCCACATCACATCGCCGTCTACCGCCTGGCCACATGTTTTACTATCCCACTTGCTCTGTGGTTCATC GTCTTTTGGGTAGTCACTCGCCGAGCCCCTGAATTGGTTGAGCGACTGGACTGGCTCCCGCAGTCGGTGTACATC GTTCTCCTCCTTATTCTGATCTGGCCTTTCAACCGCGCCTCCCGCTCCGGTCGAATCCGTTTTCTCCTTACCCTC AAGCGGATCAGTATTGGCGGTCTGGCCGAGTCGAAGGATGGCAAGTTTGGTGACATTCTGCTGGCAGATGCCCTC ACTAGCTATGCTCGCGTGATCGGAGATCTGTATATCAGCTTCTGCATGTTCTTCACCGATGGCTTCGCCGCTACT TCCAAGCCCAACCGGGCCTGTGGAAGTGAAATCGTCGTTCCGATCATCCTCGCTGTTCCTAGCTTGATTCGTCTT CGTCAGTGTTTGACTGAATATTATCGTGCGCGGCGGACAGTCACCCGGAGAGAGACGCGCAAGTTAAACCAGCAC TTGGCCAACGCTCTCAAGTATGCAAGTGCGTTCCCGGTCATTTGGATAGCCTCCAAAATGCGCAACTACAATCCA TTGGAGCTACGTGGATATAGCGAGGTTAGCATGATGCGCCTTCTGTAAGATTGTATCCCTCATGTGTTGTGTCTA TGCCTTCTCTAATACCCCCAGGTTTCTCGTCTCTTTTATCAACTCCGGCTACTCTTTCTGGTGGGATGTCGTCAA GGATTGGGATATGACTCTATTTTCCTCGGAATCTCGCGACAGCAGCCATCCATATGGACTCCGCCGGCATCGTTA CTTCGGATCTGACAAGATGTACCACTACGTCATTATCGCGGATCTGGCGCTTCGTTTCTCATGGCTATGGCGCAT TGTCCCAGGCCTCGGCTGGATTTCGGAGACTGAAAGCGGATTATGGATACTCATGTTCCTCGAAGTTGTACGACG TTGGATGTGGGTGTTCTTCCGGACGGAAGCTGAATGGAGTATGTTCCCCCCTGTGCATCCGCACTCCCCCTGATC CCAGCCGTGTGACCCATGCACCACTATCCTGGTTTTCGGACAATTCCACTCACGCTTCTGTGCACTAGTTCGAAA TACCCATGGCCCGGGCCCAGATGACGTCCTTCTCGGAGAATACAACCATAAATTCGACGCGGACTAA |