© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3485.t1 |
| Gene name | |
| Location | scaffold_05:797455..798002 |
| Strand | + |
| Gene length (bp) | 547 |
| Transcript length (bp) | 495 |
| Coding sequence length (bp) | 495 |
| Protein length (aa) | 165 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01185 | Hydrophobin | Fungal hydrophobin | 1.2E-08 | 60 | 159 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0009277 | fungal-type cell wall | Yes |
| GO:0005199 | structural constituent of cell wall | Yes |
| GO:0005198 | structural molecule activity | No |
| GO:0030312 | external encapsulating structure | No |
| GO:0005618 | cell wall | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| 3d_25C | Three days - 25 degrees Celsius | 34078.70 | 10611.60 | 57545.8 |
| 5d_25C | Five days - 25 degrees Celsius | 21215.70 | 6437.37 | 35994.0 |
| 7d_25C | Seven days - 25 degrees Celsius | 19987.70 | 5208.66 | 34766.7 |
| 10d_25C | Ten days - 25 degrees Celsius | 9936.22 | 2660.05 | 17212.4 |
| 7d_15C | Seven days - 15 degrees Celsius | 20780.80 | 7.20 | 41554.4 |
| 7d_30C | Seven days - 30 degrees Celsius | 14470.60 | 4315.62 | 24625.7 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| 3d_25C | 5d_25C | 0.240174 | no |
| 3d_25C | 7d_25C | 0.182220 | no |
| 3d_25C | 7d_15C | 0.307944 | no |
| 3d_25C | 7d_30C | 0.015833 | yes |
| 3d_25C | 10d_25C | 0.000700 | yes |
| 5d_25C | 7d_25C | 0.920621 | no |
| 5d_25C | 7d_15C | 0.976838 | no |
| 5d_25C | 7d_30C | 0.360121 | no |
| 5d_25C | 10d_25C | 0.049197 | yes |
| 7d_25C | 7d_15C | 0.958413 | no |
| 7d_25C | 7d_30C | 0.472678 | no |
| 7d_25C | 10d_25C | 0.077682 | no |
| 7d_15C | 7d_30C | 0.477127 | no |
| 7d_15C | 10d_25C | 0.115258 | no |
| 7d_30C | 10d_25C | 0.392296 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3485.t1 MQFSLSAIVLGLAATVYALPPGGASAGGAGSGNGVGNKGNTDVRFAVPDNMTVKQAQAKCGDQAQLSCCNKAVYA GDTTDINSGILGGTLSNLIGSGSGASGLGLFDQCSKLDLQIPVLIGVPIQDLINQKCKQNIACCQNSPSSANSDL IGLGLPCVALGSIL* |
| Coding | >Pro_DTO377G3_2|g3485.t1 ATGCAGTTCTCTCTCTCCGCCATTGTCCTCGGCCTCGCTGCCACTGTCTACGCTCTTCCCCCTGGAGGCGCCTCC GCTGGTGGTGCTGGCTCCGGCAACGGTGTCGGCAACAAGGGCAACACCGACGTTCGCTTCGCTGTCCCCGACAAC ATGACTGTCAAGCAGGCTCAGGCCAAGTGTGGTGACCAGGCCCAGCTCTCTTGCTGCAACAAGGCTGTCTACGCC GGTGACACCACCGACATCAACTCCGGAATCCTCGGTGGTACCCTCAGCAACCTGATCGGCTCCGGATCCGGTGCT TCTGGCCTCGGTCTCTTCGACCAGTGCTCCAAGCTGGATCTCCAGATCCCCGTCCTCATTGGTGTCCCCATCCAG GATCTCATCAACCAGAAGTGCAAGCAGAACATTGCCTGCTGCCAGAACTCTCCTTCCAGCGCCAACTCCGACCTC ATCGGTCTCGGCCTCCCCTGTGTTGCCCTTGGCTCCATCCTCTAA |
| Transcript | >Pro_DTO377G3_2|g3485.t1 ATGCAGTTCTCTCTCTCCGCCATTGTCCTCGGCCTCGCTGCCACTGTCTACGCTCTTCCCCCTGGAGGCGCCTCC GCTGGTGGTGCTGGCTCCGGCAACGGTGTCGGCAACAAGGGCAACACCGACGTTCGCTTCGCTGTCCCCGACAAC ATGACTGTCAAGCAGGCTCAGGCCAAGTGTGGTGACCAGGCCCAGCTCTCTTGCTGCAACAAGGCTGTCTACGCC GGTGACACCACCGACATCAACTCCGGAATCCTCGGTGGTACCCTCAGCAACCTGATCGGCTCCGGATCCGGTGCT TCTGGCCTCGGTCTCTTCGACCAGTGCTCCAAGCTGGATCTCCAGATCCCCGTCCTCATTGGTGTCCCCATCCAG GATCTCATCAACCAGAAGTGCAAGCAGAACATTGCCTGCTGCCAGAACTCTCCTTCCAGCGCCAACTCCGACCTC ATCGGTCTCGGCCTCCCCTGTGTTGCCCTTGGCTCCATCCTCTAA |
| Gene | >Pro_DTO377G3_2|g3485.t1 ATGCAGTTCTCTCTCTCCGCCATTGTCCTCGGCCTCGCTGCCACTGTCTACGCTCTTCCCCCTGGAGGCGCCTCC GCTGGTGGTGCTGGCTCCGGCAACGGTGTCGGCAACAAGGGCAACACCGACGTTCGCTTCGCTGTCCCCGACAAC ATGACTGTCAAGCAGGCTCAGGCCAAGTGTGGTGACCAGGCCCAGCTCTCTTGCTGCAACAAGGCTGTCTACGCC GGTGACACCACCGACATCAACTCCGGAATCCTCGGTGGTACCCTCAGCAACCTGATCGGCTCCGGATCCGGTGCT TCTGGCCTCGGTCTCTTCGACCAGTGCTCCAAGCTGGATCTCCAGATCCCCGTCCTCATTGGTGTCCCCATCCAG GATCTCATCAACCAGAAGTGCAAGCAGAACATTGCCTGCTGCCAGAACTCTCCTTCCAGCGCCGTTAGTGCTCCA ACATCCACGCTATTTCGACTACAACTGACATATCTTACAGAACTCCGACCTCATCGGTCTCGGCCTCCCCTGTGT TGCCCTTGGCTCCATCCTCTAA |