Protein ID | Pro_DTO377G3_2|g3481.t1 |
Gene name | |
Location | scaffold_05:785702..786454 |
Strand | - |
Gene length (bp) | 752 |
Transcript length (bp) | 699 |
Coding sequence length (bp) | 699 |
Protein length (aa) | 233 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | 3.7E-13 | 66 | 143 |
PF00023 | Ank | Ankyrin repeat | 1.5E-07 | 113 | 143 |
PF13857 | Ank_5 | Ankyrin repeats (many copies) | 1.5E-08 | 106 | 146 |
PF13637 | Ank_4 | Ankyrin repeats (many copies) | 1.0E-08 | 75 | 133 |
PF13606 | Ank_3 | Ankyrin repeat | 4.7E-06 | 113 | 140 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3481.t1 MSASTTSQAKPSVPIALSAEAVDDLIYDARAGDLEALNEDIANLVSQHSCNESQIVASAIDMADESEGGSGSCIL HFPAANGNSEILKTLLQKLSSADAAQRVAFVNHRNNSGNTPLHWAALNAHLECVKALVEAGADLEVKNDAGHDAV FLAERTAWATVEGDEEAEGAEGDDAQVQEIEMTIGENEDEEKPAEGAGEVSAGRQVVEWLLASDGGANLEKGATQ GEASGSA* |
Coding | >Pro_DTO377G3_2|g3481.t1 ATGTCCGCCTCCACGACATCACAAGCAAAGCCTTCAGTGCCAATCGCACTCTCCGCCGAGGCAGTCGACGACCTG ATCTATGACGCCCGAGCCGGCGACCTCGAGGCCCTAAATGAGGACATCGCCAATCTAGTCAGCCAACACAGCTGC AACGAGTCACAGATCGTGGCATCCGCCATCGACATGGCAGATGAGAGTGAGGGTGGCTCTGGATCCTGCATTCTG CACTTCCCCGCTGCGAATGGAAACTCCGAAATCCTCAAAACTCTGCTCCAAAAGCTGTCATCTGCAGACGCAGCG CAGCGTGTCGCGTTCGTTAACCACCGCAACAACTCTGGCAACACGCCTCTTCACTGGGCTGCGCTCAACGCGCAC CTGGAATGTGTCAAGGCACTTGTAGAAGCCGGCGCCGACCTTGAGGTCAAGAACGATGCTGGTCACGATGCTGTG TTCCTCGCTGAGCGGACGGCGTGGGCTACTGTTGAAGGTGATGAGGAAGCCGAGGGTGCTGAGGGCGATGATGCT CAGGTTCAGGAGATTGAGATGACTATTGGTGAGAATGAGGATGAGGAGAAGCCTGCTGAGGGCGCTGGTGAGGTA TCTGCCGGCAGACAGGTTGTTGAGTGGCTCCTGGCTTCGGATGGTGGCGCTAATTTGGAGAAGGGGGCTACTCAG GGTGAGGCTAGTGGATCTGCTTGA |
Transcript | >Pro_DTO377G3_2|g3481.t1 ATGTCCGCCTCCACGACATCACAAGCAAAGCCTTCAGTGCCAATCGCACTCTCCGCCGAGGCAGTCGACGACCTG ATCTATGACGCCCGAGCCGGCGACCTCGAGGCCCTAAATGAGGACATCGCCAATCTAGTCAGCCAACACAGCTGC AACGAGTCACAGATCGTGGCATCCGCCATCGACATGGCAGATGAGAGTGAGGGTGGCTCTGGATCCTGCATTCTG CACTTCCCCGCTGCGAATGGAAACTCCGAAATCCTCAAAACTCTGCTCCAAAAGCTGTCATCTGCAGACGCAGCG CAGCGTGTCGCGTTCGTTAACCACCGCAACAACTCTGGCAACACGCCTCTTCACTGGGCTGCGCTCAACGCGCAC CTGGAATGTGTCAAGGCACTTGTAGAAGCCGGCGCCGACCTTGAGGTCAAGAACGATGCTGGTCACGATGCTGTG TTCCTCGCTGAGCGGACGGCGTGGGCTACTGTTGAAGGTGATGAGGAAGCCGAGGGTGCTGAGGGCGATGATGCT CAGGTTCAGGAGATTGAGATGACTATTGGTGAGAATGAGGATGAGGAGAAGCCTGCTGAGGGCGCTGGTGAGGTA TCTGCCGGCAGACAGGTTGTTGAGTGGCTCCTGGCTTCGGATGGTGGCGCTAATTTGGAGAAGGGGGCTACTCAG GGTGAGGCTAGTGGATCTGCTTGA |
Gene | >Pro_DTO377G3_2|g3481.t1 ATGTCCGCCTCCACGACATCACAAGCAAAGCCTTCAGTGCCAATCGCACTCTCCGCCGAGGCAGTCGACGACCTG ATCTATGACGCCCGAGCCGGCGACCTCGAGGCCCTAAATGAGGACATCGCCAATCTAGTCAGCCAACACAGCTGC AACGAGTCACAGATCGTGGCATCCGCCATCGACATGGCAGATGAGAGTGAGGGTGGCTCTGGATCCTGCATTCTG CACTTCCCCGCTGCGAATGGAAACTCCGGTATGTCATTTCAACGACTTGACCTGACTTGCTTGTTTACTAACACC GCTCAGAAATCCTCAAAACTCTGCTCCAAAAGCTGTCATCTGCAGACGCAGCGCAGCGTGTCGCGTTCGTTAACC ACCGCAACAACTCTGGCAACACGCCTCTTCACTGGGCTGCGCTCAACGCGCACCTGGAATGTGTCAAGGCACTTG TAGAAGCCGGCGCCGACCTTGAGGTCAAGAACGATGCTGGTCACGATGCTGTGTTCCTCGCTGAGCGGACGGCGT GGGCTACTGTTGAAGGTGATGAGGAAGCCGAGGGTGCTGAGGGCGATGATGCTCAGGTTCAGGAGATTGAGATGA CTATTGGTGAGAATGAGGATGAGGAGAAGCCTGCTGAGGGCGCTGGTGAGGTATCTGCCGGCAGACAGGTTGTTG AGTGGCTCCTGGCTTCGGATGGTGGCGCTAATTTGGAGAAGGGGGCTACTCAGGGTGAGGCTAGTGGATCTGCTT GA |