Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3475.t1
Gene name
Locationscaffold_05:773999..775230
Strand+
Gene length (bp)1231
Transcript length (bp)969
Coding sequence length (bp)969
Protein length (aa) 323

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08058 NPCC Nuclear pore complex component 7.4E-24 85 208

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 112 129 17
2 144 166 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3475.t1
MTLRGTAIRCVSLAGSTYARATPSLSAERSHFGIFIISSPVKFTSLCTLDIIFTTVAMATQFLPSTPKATPPLPP
PTPEGTLTPGKWRHPQLEEIVRRQNAATFDQKNVKKLVWNGAALILSWTFGSTFKSYLRQILDTNHIYQEIPLLI
LQLFFVFNVIVALSPLFRPTDDLSDIPLTPTQRSLLGLDPAATPPATPGTVFVTPPRYRLSSRKASPASRQPSPI
SANASFSERRSSISTPFSPVSSPLLYKAMSNGGRESIQRQSFGSSSPLTRSNSFGESTMSMGPGTPSPLMGKRGS
LGVKNKWLYERSRRLSASGGAP*
Coding >Pro_DTO377G3_2|g3475.t1
ATGACGTTGAGGGGCACGGCGATAAGGTGTGTCAGCTTGGCCGGGTCAACTTATGCCCGTGCAACCCCTTCCTTG
AGCGCCGAGCGCAGCCACTTTGGGATCTTCATAATATCATCTCCAGTCAAGTTCACCTCACTCTGCACTCTCGAC
ATCATCTTCACCACGGTAGCAATGGCCACTCAATTTCTTCCTTCCACCCCGAAAGCGACACCTCCGCTGCCTCCT
CCCACTCCAGAGGGTACCCTGACCCCTGGAAAATGGCGACACCCTCAACTGGAAGAGATCGTTCGGCGGCAAAAT
GCAGCTACATTTGATCAGAAAAATGTGAAGAAGCTCGTTTGGAACGGCGCAGCTTTGATACTGAGCTGGACATTT
GGATCTACCTTCAAAAGCTACTTACGCCAAATACTCGATACCAACCATATCTATCAAGAAATCCCGTTACTCATT
CTCCAACTCTTCTTCGTTTTCAATGTTATAGTGGCCCTCTCTCCCCTCTTCCGGCCAACGGACGACCTCTCCGAC
ATTCCCCTTACCCCCACCCAGCGCTCACTTCTTGGTTTGGATCCTGCTGCCACACCACCAGCAACGCCTGGAACA
GTATTTGTTACCCCACCCAGATACCGGCTTTCTTCACGCAAGGCCAGTCCTGCTAGCAGACAGCCCTCCCCAATT
TCCGCGAATGCAAGCTTTTCTGAGCGTCGCTCTTCCATCAGCACACCCTTCTCGCCTGTATCCAGCCCCCTGCTT
TACAAAGCGATGTCGAATGGAGGCAGAGAATCTATTCAACGCCAGAGCTTTGGATCCTCGTCCCCTCTGACTCGA
AGTAACTCCTTTGGAGAGTCGACCATGAGCATGGGCCCAGGCACACCTTCCCCGCTTATGGGAAAACGAGGAAGT
CTGGGGGTCAAGAACAAGTGGCTATATGAGAGGAGCCGCCGGCTTTCGGCTAGCGGAGGAGCCCCCTGA
Transcript >Pro_DTO377G3_2|g3475.t1
ATGACGTTGAGGGGCACGGCGATAAGGTGTGTCAGCTTGGCCGGGTCAACTTATGCCCGTGCAACCCCTTCCTTG
AGCGCCGAGCGCAGCCACTTTGGGATCTTCATAATATCATCTCCAGTCAAGTTCACCTCACTCTGCACTCTCGAC
ATCATCTTCACCACGGTAGCAATGGCCACTCAATTTCTTCCTTCCACCCCGAAAGCGACACCTCCGCTGCCTCCT
CCCACTCCAGAGGGTACCCTGACCCCTGGAAAATGGCGACACCCTCAACTGGAAGAGATCGTTCGGCGGCAAAAT
GCAGCTACATTTGATCAGAAAAATGTGAAGAAGCTCGTTTGGAACGGCGCAGCTTTGATACTGAGCTGGACATTT
GGATCTACCTTCAAAAGCTACTTACGCCAAATACTCGATACCAACCATATCTATCAAGAAATCCCGTTACTCATT
CTCCAACTCTTCTTCGTTTTCAATGTTATAGTGGCCCTCTCTCCCCTCTTCCGGCCAACGGACGACCTCTCCGAC
ATTCCCCTTACCCCCACCCAGCGCTCACTTCTTGGTTTGGATCCTGCTGCCACACCACCAGCAACGCCTGGAACA
GTATTTGTTACCCCACCCAGATACCGGCTTTCTTCACGCAAGGCCAGTCCTGCTAGCAGACAGCCCTCCCCAATT
TCCGCGAATGCAAGCTTTTCTGAGCGTCGCTCTTCCATCAGCACACCCTTCTCGCCTGTATCCAGCCCCCTGCTT
TACAAAGCGATGTCGAATGGAGGCAGAGAATCTATTCAACGCCAGAGCTTTGGATCCTCGTCCCCTCTGACTCGA
AGTAACTCCTTTGGAGAGTCGACCATGAGCATGGGCCCAGGCACACCTTCCCCGCTTATGGGAAAACGAGGAAGT
CTGGGGGTCAAGAACAAGTGGCTATATGAGAGGAGCCGCCGGCTTTCGGCTAGCGGAGGAGCCCCCTGA
Gene >Pro_DTO377G3_2|g3475.t1
ATGACGTTGAGGGGCACGGCGATAAGGTGTGTCAGCTTGGCCGGGTCAACTTATGCCCGTGCAACCCCTTCCTTG
AGCGCCGAGCGCAGCCACTTTGGGATCGTCAATTTATAGCCAAACAACAACAATAATGACTTTTTGAAAGAAGAA
TTGTTCATTGCTACGTGCACTACTAACTGACAGCTGCTTGTGTTTGCTCTCTTCTAGGTAAGTACTAAACTAGTT
CATAATATCAGTGAGTCCAATCCCTCTTGTCAAAAAGACCTCGCAAAAAAACAGTCTACGCATCTACGGATCAGT
AGCTGATTTCACGATCCTAGTCTCCAGTCAAGTTCACCTCACTCTGCACTCTCGACATCATCTTCACCACGGTAG
CAATGGCCACTCAATTTCTTCCTTCCACCCCGAAAGCGACACCTCCGCTGCCTCCTCCCACTCCAGAGGGTACCC
TGACCCCTGGAAAATGGCGACACCCTCAACTGGAAGAGATCGTTCGGCGGCAAAATGCAGCTACATTTGATCAGA
AAAATGTGAAGAAGCTCGTTTGGAACGGCGCAGCTTTGATACTGAGCTGGACATTTGGATCTACCTTCAAAAGCT
AGTGAGTGCGATAAGAACTCTGATCCGTCGCGTCGCGTGCTAACGGTCTTATTTAAGCTTACGCCAAATACTCGA
TACCAACCATATCTATCAAGAAATCCCGTTACTCATTCTCCAACTCTTCTTCGTTTTCAATGTTATAGTGGCCCT
CTCTCCCCTCTTCCGGCCAACGGACGACCTCTCCGACATTCCCCTTACCCCCACCCAGCGCTCACTTCTTGGTTT
GGATCCTGCTGCCACACCACCAGCAACGCCTGGAACAGTATTTGTTACCCCACCCAGATACCGGCTTTCTTCACG
CAAGGCCAGTCCTGCTAGCAGACAGCCCTCCCCAATTTCCGCGAATGCAAGCTTTTCTGAGCGTCGCTCTTCCAT
CAGCACACCCTTCTCGCCTGTATCCAGCCCCCTGCTTTACAAAGCGATGTCGAATGGAGGCAGAGAATCTATTCA
ACGCCAGAGCTTTGGATCCTCGTCCCCTCTGACTCGAAGTAACTCCTTTGGAGAGTCGACCATGAGCATGGGCCC
AGGCACACCTTCCCCGCTTATGGGAAAACGAGGAAGTCTGGGGGTCAAGAACAAGTGGCTATATGAGAGGAGCCG
CCGGCTTTCGGCTAGCGGAGGAGCCCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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