Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3453.t1
Gene name
Locationscaffold_05:732742..734185
Strand+
Gene length (bp)1443
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00179 UQ_con Ubiquitin-conjugating enzyme 2.0E-42 82 221
PF09288 UBA_3 Fungal ubiquitin-associated domain 3.1E-05 258 287

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3453.t1
MQMWWYRRRPGRWASWKLLGPHVTIYASGRHCVIHTYCLNACLSYRLPRFSPPLPHSVLLSTAASTLLCSLWQDG
NSNRMRRIGKEIADIHADVHSHIKAEPFGNLDDLTHLRGSFPGPPGTPYEGGIYNIDIKIPTDYPFRPPTMKFET
KVWHPNVSSQTGAICLDTLSSAWSPVLTIKSALLSLQSLLSTPEPKDPQDAEVANMLLKSPKEFERVARDWAVLY
AGAPVRSADNGSGSSLDDTRQAASEDNLAKYDGYNKNLIDRFSSMGFDVDRVVAAFRYVGVERRGGQDYELEEGR
MGDIAARLLGE*
Coding >Pro_DTO377G3_2|g3453.t1
ATGCAGATGTGGTGGTATCGCCGGAGGCCAGGACGCTGGGCGAGCTGGAAGCTGTTAGGCCCACACGTGACTATT
TACGCCTCAGGCCGCCACTGCGTCATCCACACCTATTGCCTTAACGCCTGTCTTAGTTATCGGCTTCCAAGGTTT
TCCCCTCCTTTGCCCCACTCTGTCCTCCTCTCCACGGCAGCTTCCACGCTCTTGTGCAGTCTTTGGCAAGACGGA
AATAGCAATCGTATGCGTCGCATTGGAAAAGAAATTGCGGACATTCACGCCGATGTCCACTCTCACATAAAGGCG
GAGCCATTTGGCAACCTGGACGATCTCACTCACCTAAGGGGGTCGTTTCCAGGGCCACCAGGTACCCCATATGAA
GGTGGCATCTACAATATCGATATCAAAATCCCAACGGACTATCCTTTTCGACCACCTACCATGAAGTTTGAGACC
AAAGTGTGGCATCCAAATGTCAGCAGTCAAACGGGCGCAATCTGCCTCGACACACTTTCCAGTGCTTGGTCACCA
GTTCTGACTATCAAGTCCGCTCTGCTTTCACTGCAGTCTTTGCTCAGCACTCCCGAGCCCAAAGATCCCCAAGAT
GCTGAAGTGGCTAATATGCTTCTCAAGTCACCCAAGGAATTTGAGCGTGTTGCACGCGACTGGGCAGTCCTCTAT
GCTGGAGCTCCCGTGCGTAGTGCTGACAATGGAAGCGGATCAAGCCTAGATGACACTCGGCAAGCAGCTAGCGAA
GATAATCTCGCAAAATATGATGGGTACAACAAGAATTTAATCGACCGTTTCTCCAGCATGGGCTTCGACGTTGAT
CGTGTTGTGGCTGCTTTCCGATATGTCGGTGTCGAAAGACGGGGAGGTCAAGACTATGAGTTGGAAGAAGGTCGT
ATGGGTGATATTGCCGCCCGACTTCTCGGTGAGTGA
Transcript >Pro_DTO377G3_2|g3453.t1
ATGCAGATGTGGTGGTATCGCCGGAGGCCAGGACGCTGGGCGAGCTGGAAGCTGTTAGGCCCACACGTGACTATT
TACGCCTCAGGCCGCCACTGCGTCATCCACACCTATTGCCTTAACGCCTGTCTTAGTTATCGGCTTCCAAGGTTT
TCCCCTCCTTTGCCCCACTCTGTCCTCCTCTCCACGGCAGCTTCCACGCTCTTGTGCAGTCTTTGGCAAGACGGA
AATAGCAATCGTATGCGTCGCATTGGAAAAGAAATTGCGGACATTCACGCCGATGTCCACTCTCACATAAAGGCG
GAGCCATTTGGCAACCTGGACGATCTCACTCACCTAAGGGGGTCGTTTCCAGGGCCACCAGGTACCCCATATGAA
GGTGGCATCTACAATATCGATATCAAAATCCCAACGGACTATCCTTTTCGACCACCTACCATGAAGTTTGAGACC
AAAGTGTGGCATCCAAATGTCAGCAGTCAAACGGGCGCAATCTGCCTCGACACACTTTCCAGTGCTTGGTCACCA
GTTCTGACTATCAAGTCCGCTCTGCTTTCACTGCAGTCTTTGCTCAGCACTCCCGAGCCCAAAGATCCCCAAGAT
GCTGAAGTGGCTAATATGCTTCTCAAGTCACCCAAGGAATTTGAGCGTGTTGCACGCGACTGGGCAGTCCTCTAT
GCTGGAGCTCCCGTGCGTAGTGCTGACAATGGAAGCGGATCAAGCCTAGATGACACTCGGCAAGCAGCTAGCGAA
GATAATCTCGCAAAATATGATGGGTACAACAAGAATTTAATCGACCGTTTCTCCAGCATGGGCTTCGACGTTGAT
CGTGTTGTGGCTGCTTTCCGATATGTCGGTGTCGAAAGACGGGGAGGTCAAGACTATGAGTTGGAAGAAGGTCGT
ATGGGTGATATTGCCGCCCGACTTCTCGGTGAGTGA
Gene >Pro_DTO377G3_2|g3453.t1
ATGCAGATGTGGTGGTATCGCCGGAGGCCAGGACGCTGGGCGAGCTGGAAGCTGTTAGGCCCACACGTGACTATT
TACGCCTCAGGCCGCCACTGCGTCATCCACACCTATTGCCTTAACGCCTGTCTTAGTTATCGGCTTCCAAGGTTG
TACGTCCGACATTCTCGAAGACAATCGAAGAAATTTATATTCCTCCGAGGCTCTATACTGAGGTTTACCTCACAC
AACCGAGACTTAAGGCTCGTGTTTTCTGTCGAGGTATATATCTCAGGTATATCTAAGGTGCATATAACAGGCGAC
AGGTGACAGTGTTTGAGCTCATCACTCATACTGATTCCCTGTATAGTTCCCCTCCTTTGGTGAGATCCTCGTTTA
TCTTATTGCTTTCAATTCCCTAGAGGATTTCATACCCCATGTGTGAGGCTCTCTACTTGATCTGAAACCTTCCTA
ACACTATCCTACTATTAGCCCCACTCTGTCCTCCTCTCCACGGCAGCTTCCACGCTCTTGTGCAGTCTTTGGCAA
GACGGAAATAGGTCTATTTGTCTCCACAATTTACACACAAAGTGGTTTATTTCAACATCTCCTGTTTGACCTCTT
TTTGAAACGAGTCGAATCGCCATGGCTAGCAATCGTATGCGTCGCATTGGAAAAGAAATTGCGGACATTCACGCC
GATGTCCACTCTCACATAAAGGCGGAGCCATTTGGCAACCTGGACGATCTCACTCACCTAAGGGGGTCGTTTCCA
GGGCCACCAGGTACCCCATATGAAGGTGGCATCTACAATATCGATATCAAAATCCCAACGGACTATCCTTTTCGA
CCACCTACCATGAAGTTTGAGACCAAAGTGTGGCATCCAAATGTCAGCAGTCAAACGGTCAGTGCCCTTATAATA
TAGATATGAGCGAATTTGGGATCTGATAGGCAATGTAGGGCGCAATCTGCCTCGACACACTTTCCAGTGCTTGGT
CACCAGTTCTGACTATCAAGTCCGCTCTGCTTTCACTGCAGTCTTTGCTCAGCACTCCCGAGCCCAAAGATCCCC
AAGATGCTGAAGTGGCTAATATGCTTCTCAAGTCACCCAAGGAATTTGAGCGTGTTGCACGCGACTGGGCAGTCC
TCTATGCTGGAGCTCCCGTGCGTAGTGCTGACAATGGAAGCGGATCAAGCCTAGATGACACTCGGCAAGCAGCTA
GCGAAGATAATCTCGCAAAGTGAGCCGTTCTTCTACCATTCATTGGGTATCCTGCTGACTATTATCTATAGATAT
GATGGGTACAACAAGAATTTAATCGACCGTTTCTCCAGCATGGGCTTCGACGTTGATCGTGTTGTGGCTGCTTTC
CGATATGTCGGTGTCGAAAGACGGGGAGGTCAAGACTATGAGTTGGAAGAAGGTCGTATGGGTGATATTGCCGCC
CGACTTCTCGGTGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail