© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3442.t1 |
| Gene name | |
| Location | scaffold_05:700852..701424 |
| Strand | + |
| Gene length (bp) | 572 |
| Transcript length (bp) | 414 |
| Coding sequence length (bp) | 414 |
| Protein length (aa) | 138 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00085 | Thioredoxin | Thioredoxin | 5.9E-27 | 48 | 133 |
| PF13905 | Thioredoxin_8 | Thioredoxin-like | 2.0E-06 | 54 | 113 |
| PF00578 | AhpC-TSA | AhpC/TSA family | 3.5E-05 | 40 | 104 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055114 | oxidation-reduction process | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0016209 | antioxidant activity | Yes |
| GO:0045454 | cell redox homeostasis | Yes |
| GO:0008150 | biological_process | No |
| GO:0065008 | regulation of biological quality | No |
| GO:0009987 | cellular process | No |
| GO:0042592 | homeostatic process | No |
| GO:0065007 | biological regulation | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0019725 | cellular homeostasis | No |
| GO:0050789 | regulation of biological process | No |
| GO:0003674 | molecular_function | No |
| GO:0050794 | regulation of cellular process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3442.t1 MELKTVLILTAIYIAVRLFFKSRKSSPAAIMSHGKVTEIDNQVIFKALTSSGPVVVDFFATWCGPCKAVAPVVGK LSEQYENVRFIQVDVDKLQGVARELSVNAMPTFVIFKDGKEVNRVVGGDMKKLEAQIKAVLA* |
| Coding | >Pro_DTO377G3_2|g3442.t1 ATGGAGCTCAAGACCGTTCTAATCCTCACTGCGATATACATTGCTGTCCGTCTCTTCTTTAAGTCACGCAAATCG AGCCCAGCCGCCATCATGTCTCACGGAAAGGTCACCGAGATCGACAACCAAGTCATCTTCAAAGCCCTCACTTCC TCCGGCCCCGTCGTCGTTGACTTCTTCGCAACCTGGTGTGGACCCTGCAAGGCCGTCGCTCCCGTCGTCGGCAAA CTGAGCGAGCAGTACGAAAACGTTCGTTTTATCCAGGTGGATGTGGACAAGCTGCAAGGTGTTGCGCGGGAACTG AGCGTGAACGCTATGCCCACCTTTGTCATTTTCAAGGACGGCAAGGAGGTGAATCGCGTTGTTGGCGGTGACATG AAGAAACTTGAGGCACAGATTAAGGCGGTTTTGGCATAG |
| Transcript | >Pro_DTO377G3_2|g3442.t1 ATGGAGCTCAAGACCGTTCTAATCCTCACTGCGATATACATTGCTGTCCGTCTCTTCTTTAAGTCACGCAAATCG AGCCCAGCCGCCATCATGTCTCACGGAAAGGTCACCGAGATCGACAACCAAGTCATCTTCAAAGCCCTCACTTCC TCCGGCCCCGTCGTCGTTGACTTCTTCGCAACCTGGTGTGGACCCTGCAAGGCCGTCGCTCCCGTCGTCGGCAAA CTGAGCGAGCAGTACGAAAACGTTCGTTTTATCCAGGTGGATGTGGACAAGCTGCAAGGTGTTGCGCGGGAACTG AGCGTGAACGCTATGCCCACCTTTGTCATTTTCAAGGACGGCAAGGAGGTGAATCGCGTTGTTGGCGGTGACATG AAGAAACTTGAGGCACAGATTAAGGCGGTTTTGGCATAG |
| Gene | >Pro_DTO377G3_2|g3442.t1 ATGGAGCTCAAGACCGTTCTAATCCTCACTGCGATATACATTGGTAAGTACTGCCACGCACTATCTCCTATGATC CAAACCTTCGTCCACCAATAGCTTTCGACCACTTCCAACAGAAACAAACAACCAAACACTAACCCCTCACAAGCT GTCCGTCTCTTCTTTAAGTCACGCAAATCGAGCCCAGCCGCCATCATGTCTCACGGAAAGGTCACCGAGATCGAC AAGTAAGTAACTCTTGATTCTGCTCGCAATTTATTCCATCCTAATCTCCGTCCAGCCAAGTCATCTTCAAAGCCC TCACTTCCTCCGGCCCCGTCGTCGTTGACTTCTTCGCAACCTGGTGTGGACCCTGCAAGGCCGTCGCTCCCGTCG TCGGCAAACTGAGCGAGCAGTACGAAAACGTTCGTTTTATCCAGGTGGATGTGGACAAGCTGCAAGGTGTTGCGC GGGAACTGAGCGTGAACGCTATGCCCACCTTTGTCATTTTCAAGGACGGCAAGGAGGTGAATCGCGTTGTTGGCG GTGACATGAAGAAACTTGAGGCACAGATTAAGGCGGTTTTGGCATAG |