Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3423.t1
Gene name
Location	scaffold_05:646432..648488
Strand	-
Gene length (bp)	2056
Transcript length (bp)	2001
Coding sequence length (bp)	2001
Protein length (aa)	667

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	2.5E-58	122	328
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	1.9E-31	348	456
PF00289	Biotin_carb_N	Biotin carboxylase, N-terminal domain	1.8E-28	9	116
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	2.6E-10	586	653
PF07478	Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	7.5E-09	132	296

GO

GO Term	Description	Terminal node
GO:0008716	D-alanine-D-alanine ligase activity	Yes
GO:0005524	ATP binding	Yes
GO:0005488	binding	No
GO:0032553	ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0016879	ligase activity, forming carbon-nitrogen bonds	No
GO:0043167	ion binding	No
GO:0016881	acid-amino acid ligase activity	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0030554	adenyl nucleotide binding	No
GO:0000166	nucleotide binding	No
GO:0003824	catalytic activity	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0016874	ligase activity	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 13	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3423.t1 MSSPHSRPIKRLLVANRGEIAVRILHAARELPSSVETFALYTSDDRPHCDLGRPQHAIEIPSASSYLDISLLVDL VQKNSIDAVHPGYGFLSESAEFAHRMWHEAGALVIGPGWENLARTGDKLQAKQLAQQCGVPVLEAMSQPTTNVDE ARAFATQVGFPVMIKAVDGGGGRGIRLVREEHELDNSIQRAIGESPSRTVFVEKAAVDGFHHIEIQIIGDGTGQV RHLWERDCSAQRRFQKVVECAPALMRDRALVGRVIESALRMASEIRYQSLGTFEFLVSEQRGEFYFLEVNPRLQV EHTITESISGIDLVQTQLLLAQGYTLRDLGLGAEIDPSHLPPNAFSIQLRLCAEDPSNGFSLSIGKVTRFTVPSG NGIRVDTHVNVSGPALVVGSNFDNLLAKIIVTAPTWEASVRKAQRVLADSRVDGLKTNISLLRGIVAHSDFMAGK VDTQWLGLNIDAVLQQGEMISKTIQGLDGSAGPSQQVSQNGLPVSNLLFRKGDAWSITLEPLSKDSQSDKVSHHL RLSRVLRNEFPTALAAEIEYTTPTSEGAIPYRMQLETTTTAASALVSSSHRRGDPKNPHHIILPLSGKLIEILVS DGQDVVENQVLAFVKQMKMELEVRSPRSGRVKWVHEMEDEEEDVAEGMLLVELEPNNGKVEVRGKL*
Coding	>Pro_DTO377G3_2\|g3423.t1 ATGTCATCCCCGCACTCACGGCCCATCAAGAGATTGTTGGTCGCCAACAGAGGAGAGATCGCCGTTCGTATTCTC CATGCAGCACGAGAGTTACCCTCGTCAGTCGAGACATTCGCTCTCTACACATCAGACGACCGACCGCATTGCGAT CTAGGACGACCACAGCATGCAATTGAAATCCCATCAGCATCATCATATCTCGACATTTCATTATTGGTCGACCTG GTCCAAAAAAACTCTATTGATGCCGTGCATCCCGGGTATGGATTCCTCAGCGAGAGCGCCGAATTCGCGCATCGC ATGTGGCACGAAGCCGGGGCTCTCGTCATAGGACCTGGATGGGAAAACCTCGCCCGGACGGGTGATAAGCTGCAG GCAAAACAGCTAGCACAGCAATGCGGTGTCCCTGTATTAGAAGCCATGAGTCAACCTACCACCAACGTGGACGAA GCACGTGCGTTTGCTACGCAGGTTGGTTTCCCGGTTATGATCAAGGCTGTTGATGGAGGAGGCGGCCGCGGGATT CGGCTCGTTCGCGAGGAGCATGAGCTGGATAATAGTATTCAGAGAGCGATTGGCGAGTCGCCGTCTCGGACTGTC TTTGTTGAGAAAGCTGCTGTGGACGGGTTTCATCATATTGAAATTCAGATTATTGGTGATGGGACAGGCCAGGTG CGACATTTGTGGGAAAGAGATTGCAGTGCTCAGCGGCGGTTTCAGAAGGTGGTTGAATGCGCCCCGGCTTTGATG CGGGATAGAGCTTTGGTCGGTCGAGTGATCGAGTCTGCGCTCAGGATGGCAAGTGAAATCCGCTATCAATCATTA GGAACCTTTGAGTTCCTGGTCAGTGAACAACGCGGGGAATTCTACTTTTTGGAGGTGAACCCGCGTCTGCAAGTC GAGCACACCATTACGGAATCTATCAGTGGGATAGACCTGGTGCAGACGCAGCTTCTTCTCGCCCAGGGATACACT TTACGTGATCTGGGCCTCGGCGCTGAAATTGACCCAAGTCATCTTCCGCCAAATGCCTTTTCAATCCAACTTAGA CTGTGTGCTGAAGACCCGAGCAACGGGTTTTCTCTGAGCATTGGCAAAGTGACTAGGTTTACCGTGCCTAGTGGC AATGGAATCCGGGTAGATACACATGTCAATGTCTCTGGGCCCGCACTAGTTGTGGGATCCAACTTCGACAATCTG TTAGCCAAGATAATCGTGACTGCGCCCACCTGGGAAGCGTCCGTTAGAAAAGCCCAGCGAGTCTTGGCTGATTCA AGGGTTGACGGTCTGAAGACTAATATCAGCCTTCTACGAGGGATCGTGGCCCATTCCGATTTCATGGCCGGCAAA GTCGACACGCAATGGCTTGGACTCAACATCGACGCAGTACTCCAGCAAGGGGAGATGATATCGAAGACTATTCAG GGACTAGATGGTTCAGCCGGCCCTTCACAGCAAGTCAGCCAGAATGGACTACCAGTATCTAATCTTTTGTTCCGA AAAGGAGATGCATGGTCAATCACGTTGGAACCTCTGTCGAAGGATTCCCAATCAGACAAAGTTTCCCACCATCTG CGCCTGTCCCGGGTACTACGCAATGAGTTCCCGACTGCATTGGCTGCCGAAATTGAATATACGACTCCAACTTCG GAGGGCGCAATCCCCTATCGGATGCAGCTCGAAACAACCACGACTGCTGCGTCAGCATTGGTGTCCTCGTCTCAT CGGCGAGGTGATCCAAAGAATCCCCATCATATTATACTTCCTCTGTCAGGCAAATTGATTGAGATCCTGGTGTCG GATGGACAGGATGTGGTTGAAAACCAGGTCCTAGCTTTCGTCAAGCAGATGAAGATGGAGCTCGAAGTACGAAGC CCTCGAAGTGGTCGGGTCAAATGGGTTCATGAGATGGAAGACGAAGAGGAGGATGTTGCCGAGGGCATGCTTTTG GTCGAGTTGGAGCCGAACAATGGCAAAGTGGAAGTCCGGGGCAAGTTGTGA
Transcript	>Pro_DTO377G3_2\|g3423.t1 ATGTCATCCCCGCACTCACGGCCCATCAAGAGATTGTTGGTCGCCAACAGAGGAGAGATCGCCGTTCGTATTCTC CATGCAGCACGAGAGTTACCCTCGTCAGTCGAGACATTCGCTCTCTACACATCAGACGACCGACCGCATTGCGAT CTAGGACGACCACAGCATGCAATTGAAATCCCATCAGCATCATCATATCTCGACATTTCATTATTGGTCGACCTG GTCCAAAAAAACTCTATTGATGCCGTGCATCCCGGGTATGGATTCCTCAGCGAGAGCGCCGAATTCGCGCATCGC ATGTGGCACGAAGCCGGGGCTCTCGTCATAGGACCTGGATGGGAAAACCTCGCCCGGACGGGTGATAAGCTGCAG GCAAAACAGCTAGCACAGCAATGCGGTGTCCCTGTATTAGAAGCCATGAGTCAACCTACCACCAACGTGGACGAA GCACGTGCGTTTGCTACGCAGGTTGGTTTCCCGGTTATGATCAAGGCTGTTGATGGAGGAGGCGGCCGCGGGATT CGGCTCGTTCGCGAGGAGCATGAGCTGGATAATAGTATTCAGAGAGCGATTGGCGAGTCGCCGTCTCGGACTGTC TTTGTTGAGAAAGCTGCTGTGGACGGGTTTCATCATATTGAAATTCAGATTATTGGTGATGGGACAGGCCAGGTG CGACATTTGTGGGAAAGAGATTGCAGTGCTCAGCGGCGGTTTCAGAAGGTGGTTGAATGCGCCCCGGCTTTGATG CGGGATAGAGCTTTGGTCGGTCGAGTGATCGAGTCTGCGCTCAGGATGGCAAGTGAAATCCGCTATCAATCATTA GGAACCTTTGAGTTCCTGGTCAGTGAACAACGCGGGGAATTCTACTTTTTGGAGGTGAACCCGCGTCTGCAAGTC GAGCACACCATTACGGAATCTATCAGTGGGATAGACCTGGTGCAGACGCAGCTTCTTCTCGCCCAGGGATACACT TTACGTGATCTGGGCCTCGGCGCTGAAATTGACCCAAGTCATCTTCCGCCAAATGCCTTTTCAATCCAACTTAGA CTGTGTGCTGAAGACCCGAGCAACGGGTTTTCTCTGAGCATTGGCAAAGTGACTAGGTTTACCGTGCCTAGTGGC AATGGAATCCGGGTAGATACACATGTCAATGTCTCTGGGCCCGCACTAGTTGTGGGATCCAACTTCGACAATCTG TTAGCCAAGATAATCGTGACTGCGCCCACCTGGGAAGCGTCCGTTAGAAAAGCCCAGCGAGTCTTGGCTGATTCA AGGGTTGACGGTCTGAAGACTAATATCAGCCTTCTACGAGGGATCGTGGCCCATTCCGATTTCATGGCCGGCAAA GTCGACACGCAATGGCTTGGACTCAACATCGACGCAGTACTCCAGCAAGGGGAGATGATATCGAAGACTATTCAG GGACTAGATGGTTCAGCCGGCCCTTCACAGCAAGTCAGCCAGAATGGACTACCAGTATCTAATCTTTTGTTCCGA AAAGGAGATGCATGGTCAATCACGTTGGAACCTCTGTCGAAGGATTCCCAATCAGACAAAGTTTCCCACCATCTG CGCCTGTCCCGGGTACTACGCAATGAGTTCCCGACTGCATTGGCTGCCGAAATTGAATATACGACTCCAACTTCG GAGGGCGCAATCCCCTATCGGATGCAGCTCGAAACAACCACGACTGCTGCGTCAGCATTGGTGTCCTCGTCTCAT CGGCGAGGTGATCCAAAGAATCCCCATCATATTATACTTCCTCTGTCAGGCAAATTGATTGAGATCCTGGTGTCG GATGGACAGGATGTGGTTGAAAACCAGGTCCTAGCTTTCGTCAAGCAGATGAAGATGGAGCTCGAAGTACGAAGC CCTCGAAGTGGTCGGGTCAAATGGGTTCATGAGATGGAAGACGAAGAGGAGGATGTTGCCGAGGGCATGCTTTTG GTCGAGTTGGAGCCGAACAATGGCAAAGTGGAAGTCCGGGGCAAGTTGTGA
Gene	>Pro_DTO377G3_2\|g3423.t1 ATGTCATCCCCGCACTCACGGCCCATCAAGAGATTGTTGGTCGCCAACAGGTATGAACTTCTAAAAAAAGTTAAT GTTATATTATACTCATGTAATATATAATAGAGGAGAGATCGCCGTTCGTATTCTCCATGCAGCACGAGAGTTACC CTCGTCAGTCGAGACATTCGCTCTCTACACATCAGACGACCGACCGCATTGCGATCTAGGACGACCACAGCATGC AATTGAAATCCCATCAGCATCATCATATCTCGACATTTCATTATTGGTCGACCTGGTCCAAAAAAACTCTATTGA TGCCGTGCATCCCGGGTATGGATTCCTCAGCGAGAGCGCCGAATTCGCGCATCGCATGTGGCACGAAGCCGGGGC TCTCGTCATAGGACCTGGATGGGAAAACCTCGCCCGGACGGGTGATAAGCTGCAGGCAAAACAGCTAGCACAGCA ATGCGGTGTCCCTGTATTAGAAGCCATGAGTCAACCTACCACCAACGTGGACGAAGCACGTGCGTTTGCTACGCA GGTTGGTTTCCCGGTTATGATCAAGGCTGTTGATGGAGGAGGCGGCCGCGGGATTCGGCTCGTTCGCGAGGAGCA TGAGCTGGATAATAGTATTCAGAGAGCGATTGGCGAGTCGCCGTCTCGGACTGTCTTTGTTGAGAAAGCTGCTGT GGACGGGTTTCATCATATTGAAATTCAGATTATTGGTGATGGGACAGGCCAGGTGCGACATTTGTGGGAAAGAGA TTGCAGTGCTCAGCGGCGGTTTCAGAAGGTGGTTGAATGCGCCCCGGCTTTGATGCGGGATAGAGCTTTGGTCGG TCGAGTGATCGAGTCTGCGCTCAGGATGGCAAGTGAAATCCGCTATCAATCATTAGGAACCTTTGAGTTCCTGGT CAGTGAACAACGCGGGGAATTCTACTTTTTGGAGGTGAACCCGCGTCTGCAAGTCGAGCACACCATTACGGAATC TATCAGTGGGATAGACCTGGTGCAGACGCAGCTTCTTCTCGCCCAGGGATACACTTTACGTGATCTGGGCCTCGG CGCTGAAATTGACCCAAGTCATCTTCCGCCAAATGCCTTTTCAATCCAACTTAGACTGTGTGCTGAAGACCCGAG CAACGGGTTTTCTCTGAGCATTGGCAAAGTGACTAGGTTTACCGTGCCTAGTGGCAATGGAATCCGGGTAGATAC ACATGTCAATGTCTCTGGGCCCGCACTAGTTGTGGGATCCAACTTCGACAATCTGTTAGCCAAGATAATCGTGAC TGCGCCCACCTGGGAAGCGTCCGTTAGAAAAGCCCAGCGAGTCTTGGCTGATTCAAGGGTTGACGGTCTGAAGAC TAATATCAGCCTTCTACGAGGGATCGTGGCCCATTCCGATTTCATGGCCGGCAAAGTCGACACGCAATGGCTTGG ACTCAACATCGACGCAGTACTCCAGCAAGGGGAGATGATATCGAAGACTATTCAGGGACTAGATGGTTCAGCCGG CCCTTCACAGCAAGTCAGCCAGAATGGACTACCAGTATCTAATCTTTTGTTCCGAAAAGGAGATGCATGGTCAAT CACGTTGGAACCTCTGTCGAAGGATTCCCAATCAGACAAAGTTTCCCACCATCTGCGCCTGTCCCGGGTACTACG CAATGAGTTCCCGACTGCATTGGCTGCCGAAATTGAATATACGACTCCAACTTCGGAGGGCGCAATCCCCTATCG GATGCAGCTCGAAACAACCACGACTGCTGCGTCAGCATTGGTGTCCTCGTCTCATCGGCGAGGTGATCCAAAGAA TCCCCATCATATTATACTTCCTCTGTCAGGCAAATTGATTGAGATCCTGGTGTCGGATGGACAGGATGTGGTTGA AAACCAGGTCCTAGCTTTCGTCAAGCAGATGAAGATGGAGCTCGAAGTACGAAGCCCTCGAAGTGGTCGGGTCAA ATGGGTTCATGAGATGGAAGACGAAGAGGAGGATGTTGCCGAGGGCATGCTTTTGGTCGAGTTGGAGCCGAACAA TGGCAAAGTGGAAGTCCGGGGCAAGTTGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences