Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3421.t1
Gene name
Locationscaffold_05:636417..637866
Strand+
Gene length (bp)1449
Transcript length (bp)1449
Coding sequence length (bp)1449
Protein length (aa) 483

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01137 RTC RNA 3'-terminal phosphate cyclase 4.3E-48 21 482

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3421.t1
MAASRSISSKLSHVHLNGQTLEGGGQLVRIAIGLSALTGRPVSIDHVRGNRDGKKGLKRSHAAAVKLLAEISGSE
VSGGEVGSQSLSFCPQSTRSKSGPLLDLSQVSVKSEYDIKLSTAGAIFLVFQALYPYLLHVGSQAATPFVKVNIT
GGTNATFSPSYDYAAQVIVPNFAKLGLPPLSVILHKRGWTTGPVDLGEVTFLINPLGSNSNDENQHKQSSEKDRA
PEPLSSFPQINLMDHERGKVTQIDITVLAPDQPTLNNNTEGTGSTLRQFIEQGTRRLLRRETRKLDPSIFAKSST
PPREDTLSKISSKDTPVPIKIHTSEATNHRSHVYILLVAHTSSGFRIGHDILGNIGGDRLHKPKNKGRQKQQPAH
DHRHESQTEAAFSGAADLVRRCVEGFIEEISNESPNANADKKPDSIVRRASLDKHMRDQVVVFEALGKACHAGHG
NKASDTETLEDERDWTLHTKTAQWVCGQILNV*
Coding >Pro_DTO377G3_2|g3421.t1
ATGGCGGCCTCGCGATCTATTTCGTCCAAATTAAGCCACGTTCATTTGAACGGCCAAACCCTGGAAGGGGGCGGG
CAGCTGGTTCGAATCGCCATCGGGCTGTCTGCATTGACTGGTCGTCCAGTTAGCATTGATCATGTTCGCGGAAAC
AGAGATGGAAAGAAGGGGCTCAAGAGATCTCATGCCGCAGCAGTGAAGCTGTTGGCCGAGATTAGCGGCAGCGAA
GTCTCGGGAGGCGAGGTTGGCTCCCAGTCCTTGAGCTTCTGCCCACAGTCAACCAGATCGAAAAGTGGTCCGCTC
CTGGACTTGTCGCAAGTCAGTGTGAAGTCTGAATACGACATCAAGCTCTCAACTGCCGGTGCCATCTTTCTCGTC
TTCCAGGCACTCTACCCGTATCTGCTTCATGTTGGATCGCAGGCGGCGACACCCTTTGTGAAAGTGAACATAACT
GGTGGAACCAACGCTACCTTCTCTCCATCATATGACTATGCAGCGCAAGTTATTGTGCCCAATTTCGCCAAACTC
GGACTTCCTCCCCTGTCCGTTATTCTTCATAAGCGCGGCTGGACAACGGGGCCGGTTGACCTGGGAGAAGTGACT
TTTCTCATAAATCCACTCGGGTCTAATTCAAATGACGAAAATCAACACAAGCAGTCATCAGAAAAAGACCGGGCA
CCTGAGCCTCTATCCAGCTTCCCACAAATCAACTTGATGGATCACGAACGCGGGAAAGTCACGCAAATTGATATC
ACAGTGCTAGCACCTGACCAACCCACTTTGAACAACAACACAGAAGGCACGGGGAGCACTCTTCGCCAATTTATC
GAACAAGGCACTCGACGCCTGCTTCGCCGTGAAACGAGAAAGCTGGATCCATCTATATTTGCTAAGAGCTCTACT
CCTCCACGTGAAGATACTCTCAGCAAAATATCATCCAAAGATACACCAGTTCCTATCAAAATACACACATCGGAA
GCCACAAATCACCGCAGCCACGTATACATCCTTCTTGTGGCCCATACCTCTTCAGGTTTCAGAATAGGCCACGAT
ATTCTTGGCAATATAGGAGGCGATCGCCTGCACAAGCCAAAGAACAAGGGGAGACAAAAGCAACAGCCAGCTCAT
GATCATAGGCACGAATCTCAAACCGAGGCTGCATTTTCTGGGGCTGCAGATTTAGTCCGCCGATGTGTGGAAGGA
TTCATTGAGGAAATCTCAAACGAGAGTCCAAATGCCAATGCAGACAAGAAACCCGATTCCATCGTCAGAAGAGCC
TCTTTAGATAAACATATGAGAGACCAAGTTGTTGTTTTCGAAGCACTTGGAAAGGCCTGTCACGCAGGGCATGGC
AACAAAGCAAGCGATACCGAAACTCTGGAGGACGAACGAGATTGGACACTCCACACGAAGACCGCACAGTGGGTG
TGCGGGCAGATTTTGAACGTGTAG
Transcript >Pro_DTO377G3_2|g3421.t1
ATGGCGGCCTCGCGATCTATTTCGTCCAAATTAAGCCACGTTCATTTGAACGGCCAAACCCTGGAAGGGGGCGGG
CAGCTGGTTCGAATCGCCATCGGGCTGTCTGCATTGACTGGTCGTCCAGTTAGCATTGATCATGTTCGCGGAAAC
AGAGATGGAAAGAAGGGGCTCAAGAGATCTCATGCCGCAGCAGTGAAGCTGTTGGCCGAGATTAGCGGCAGCGAA
GTCTCGGGAGGCGAGGTTGGCTCCCAGTCCTTGAGCTTCTGCCCACAGTCAACCAGATCGAAAAGTGGTCCGCTC
CTGGACTTGTCGCAAGTCAGTGTGAAGTCTGAATACGACATCAAGCTCTCAACTGCCGGTGCCATCTTTCTCGTC
TTCCAGGCACTCTACCCGTATCTGCTTCATGTTGGATCGCAGGCGGCGACACCCTTTGTGAAAGTGAACATAACT
GGTGGAACCAACGCTACCTTCTCTCCATCATATGACTATGCAGCGCAAGTTATTGTGCCCAATTTCGCCAAACTC
GGACTTCCTCCCCTGTCCGTTATTCTTCATAAGCGCGGCTGGACAACGGGGCCGGTTGACCTGGGAGAAGTGACT
TTTCTCATAAATCCACTCGGGTCTAATTCAAATGACGAAAATCAACACAAGCAGTCATCAGAAAAAGACCGGGCA
CCTGAGCCTCTATCCAGCTTCCCACAAATCAACTTGATGGATCACGAACGCGGGAAAGTCACGCAAATTGATATC
ACAGTGCTAGCACCTGACCAACCCACTTTGAACAACAACACAGAAGGCACGGGGAGCACTCTTCGCCAATTTATC
GAACAAGGCACTCGACGCCTGCTTCGCCGTGAAACGAGAAAGCTGGATCCATCTATATTTGCTAAGAGCTCTACT
CCTCCACGTGAAGATACTCTCAGCAAAATATCATCCAAAGATACACCAGTTCCTATCAAAATACACACATCGGAA
GCCACAAATCACCGCAGCCACGTATACATCCTTCTTGTGGCCCATACCTCTTCAGGTTTCAGAATAGGCCACGAT
ATTCTTGGCAATATAGGAGGCGATCGCCTGCACAAGCCAAAGAACAAGGGGAGACAAAAGCAACAGCCAGCTCAT
GATCATAGGCACGAATCTCAAACCGAGGCTGCATTTTCTGGGGCTGCAGATTTAGTCCGCCGATGTGTGGAAGGA
TTCATTGAGGAAATCTCAAACGAGAGTCCAAATGCCAATGCAGACAAGAAACCCGATTCCATCGTCAGAAGAGCC
TCTTTAGATAAACATATGAGAGACCAAGTTGTTGTTTTCGAAGCACTTGGAAAGGCCTGTCACGCAGGGCATGGC
AACAAAGCAAGCGATACCGAAACTCTGGAGGACGAACGAGATTGGACACTCCACACGAAGACCGCACAGTGGGTG
TGCGGGCAGATTTTGAACGTGTAG
Gene >Pro_DTO377G3_2|g3421.t1
ATGGCGGCCTCGCGATCTATTTCGTCCAAATTAAGCCACGTTCATTTGAACGGCCAAACCCTGGAAGGGGGCGGG
CAGCTGGTTCGAATCGCCATCGGGCTGTCTGCATTGACTGGTCGTCCAGTTAGCATTGATCATGTTCGCGGAAAC
AGAGATGGAAAGAAGGGGCTCAAGAGATCTCATGCCGCAGCAGTGAAGCTGTTGGCCGAGATTAGCGGCAGCGAA
GTCTCGGGAGGCGAGGTTGGCTCCCAGTCCTTGAGCTTCTGCCCACAGTCAACCAGATCGAAAAGTGGTCCGCTC
CTGGACTTGTCGCAAGTCAGTGTGAAGTCTGAATACGACATCAAGCTCTCAACTGCCGGTGCCATCTTTCTCGTC
TTCCAGGCACTCTACCCGTATCTGCTTCATGTTGGATCGCAGGCGGCGACACCCTTTGTGAAAGTGAACATAACT
GGTGGAACCAACGCTACCTTCTCTCCATCATATGACTATGCAGCGCAAGTTATTGTGCCCAATTTCGCCAAACTC
GGACTTCCTCCCCTGTCCGTTATTCTTCATAAGCGCGGCTGGACAACGGGGCCGGTTGACCTGGGAGAAGTGACT
TTTCTCATAAATCCACTCGGGTCTAATTCAAATGACGAAAATCAACACAAGCAGTCATCAGAAAAAGACCGGGCA
CCTGAGCCTCTATCCAGCTTCCCACAAATCAACTTGATGGATCACGAACGCGGGAAAGTCACGCAAATTGATATC
ACAGTGCTAGCACCTGACCAACCCACTTTGAACAACAACACAGAAGGCACGGGGAGCACTCTTCGCCAATTTATC
GAACAAGGCACTCGACGCCTGCTTCGCCGTGAAACGAGAAAGCTGGATCCATCTATATTTGCTAAGAGCTCTACT
CCTCCACGTGAAGATACTCTCAGCAAAATATCATCCAAAGATACACCAGTTCCTATCAAAATACACACATCGGAA
GCCACAAATCACCGCAGCCACGTATACATCCTTCTTGTGGCCCATACCTCTTCAGGTTTCAGAATAGGCCACGAT
ATTCTTGGCAATATAGGAGGCGATCGCCTGCACAAGCCAAAGAACAAGGGGAGACAAAAGCAACAGCCAGCTCAT
GATCATAGGCACGAATCTCAAACCGAGGCTGCATTTTCTGGGGCTGCAGATTTAGTCCGCCGATGTGTGGAAGGA
TTCATTGAGGAAATCTCAAACGAGAGTCCAAATGCCAATGCAGACAAGAAACCCGATTCCATCGTCAGAAGAGCC
TCTTTAGATAAACATATGAGAGACCAAGTTGTTGTTTTCGAAGCACTTGGAAAGGCCTGTCACGCAGGGCATGGC
AACAAAGCAAGCGATACCGAAACTCTGGAGGACGAACGAGATTGGACACTCCACACGAAGACCGCACAGTGGGTG
TGCGGGCAGATTTTGAACGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail