Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3377.t1
Gene name
Locationscaffold_05:508669..510118
Strand-
Gene length (bp)1449
Transcript length (bp)1335
Coding sequence length (bp)1335
Protein length (aa) 445

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00928 Adap_comp_sub Adaptor complexes medium subunit family 2.3E-83 160 443
PF01217 Clat_adaptor_s Clathrin adaptor complex small chain 3.0E-05 1 128

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3377.t1
MLSGILIFNQKGENLIFRAFRSDCRPRLADIFRIQVISNPQVRSPILTLGSTTFSHVKHENIYLVAVTKSNANAA
LIFEFLYRLVMLGKSYFGKLDEEAVKNNFVLIYELLDEILDFGYPQNTDPDTLKMYITTEGVKSAITNSPSDSAR
ITQQATGALSWRRSDIKYRKNEAFVDVIEDVNLLMSATGTVLRADVNGQIVMRAYLTGTPECKFGLNDRLLLDTG
ETSSNMNNPGGGNGVSTSKTTRAAAGSVTLEDCQFHQCVKLGRFDADRIISFVPPDGEFELMRYRATENVNLPFK
VHPIVREIGTTKVEYSVAIKANYSSKLFATNVVIRIPTPLNTAKTTERTSQGRAKYEPEQNNIVWKIARFSGQSE
YVLNAEATLTTMTHQKAWSRPPLSLSFSLLMFTSSGLLVRYLKVFEKSNYSSVKWVRYMTRAGSYEIRF*
Coding >Pro_DTO377G3_2|g3377.t1
ATGCTCTCGGGGATCCTCATATTTAACCAGAAGGGCGAAAACCTCATTTTTCGCGCCTTCCGTAGCGATTGCCGC
CCGCGTTTAGCCGACATCTTCCGCATCCAAGTCATCTCCAATCCCCAGGTGCGCTCGCCGATCCTGACCTTGGGC
TCGACGACCTTTAGCCATGTCAAGCACGAGAACATCTACTTGGTAGCTGTGACCAAGAGCAATGCCAATGCCGCG
CTGATTTTCGAGTTCCTCTACCGGCTGGTCATGCTGGGCAAGAGCTATTTCGGGAAGCTCGATGAGGAGGCCGTG
AAGAACAACTTCGTCCTGATTTACGAACTGCTCGATGAAATTCTCGACTTCGGATACCCCCAGAACACCGATCCA
GATACCCTGAAAATGTACATCACAACCGAAGGCGTCAAATCGGCCATCACCAACTCCCCATCAGACTCCGCCCGA
ATTACCCAACAAGCAACAGGCGCGCTCTCCTGGCGCCGCTCCGACATAAAATACCGCAAAAACGAAGCCTTCGTC
GACGTAATCGAAGATGTCAACCTCCTGATGTCCGCCACAGGCACCGTCCTCCGCGCCGACGTCAACGGCCAGATC
GTCATGCGCGCCTACCTGACCGGCACCCCAGAATGCAAATTCGGCCTGAACGACCGCCTCCTCCTAGACACCGGT
GAGACCTCTAGCAACATGAACAACCCAGGCGGCGGCAACGGAGTCAGCACCTCAAAGACAACGCGCGCCGCGGCA
GGCTCCGTCACGCTGGAAGACTGCCAGTTCCACCAGTGCGTGAAGCTGGGCCGATTTGACGCGGACCGCATCATC
TCCTTCGTGCCGCCGGATGGCGAGTTCGAGCTGATGCGCTACCGCGCCACCGAGAACGTCAACCTGCCCTTCAAG
GTGCACCCGATTGTGCGCGAGATCGGTACCACAAAGGTCGAGTACAGCGTCGCCATCAAGGCGAACTACAGCTCC
AAGCTCTTCGCTACGAATGTGGTTATTCGTATCCCCACGCCGCTTAATACTGCCAAGACTACGGAGCGCACGAGC
CAGGGCCGCGCCAAGTATGAACCAGAGCAGAACAATATCGTCTGGAAGATTGCCCGCTTCTCCGGACAGTCGGAG
TATGTGCTTAATGCTGAGGCAACGCTTACGACTATGACGCACCAGAAGGCTTGGAGTCGTCCGCCGTTGAGTCTT
TCGTTTAGTTTGCTTATGTTTACCTCTTCGGGTCTGCTGGTGCGCTATCTTAAGGTCTTTGAGAAGAGTAATTAC
AGCTCTGTCAAGTGGGTGCGCTATATGACTCGCGCAGGGAGTTATGAGATTCGGTTCTGA
Transcript >Pro_DTO377G3_2|g3377.t1
ATGCTCTCGGGGATCCTCATATTTAACCAGAAGGGCGAAAACCTCATTTTTCGCGCCTTCCGTAGCGATTGCCGC
CCGCGTTTAGCCGACATCTTCCGCATCCAAGTCATCTCCAATCCCCAGGTGCGCTCGCCGATCCTGACCTTGGGC
TCGACGACCTTTAGCCATGTCAAGCACGAGAACATCTACTTGGTAGCTGTGACCAAGAGCAATGCCAATGCCGCG
CTGATTTTCGAGTTCCTCTACCGGCTGGTCATGCTGGGCAAGAGCTATTTCGGGAAGCTCGATGAGGAGGCCGTG
AAGAACAACTTCGTCCTGATTTACGAACTGCTCGATGAAATTCTCGACTTCGGATACCCCCAGAACACCGATCCA
GATACCCTGAAAATGTACATCACAACCGAAGGCGTCAAATCGGCCATCACCAACTCCCCATCAGACTCCGCCCGA
ATTACCCAACAAGCAACAGGCGCGCTCTCCTGGCGCCGCTCCGACATAAAATACCGCAAAAACGAAGCCTTCGTC
GACGTAATCGAAGATGTCAACCTCCTGATGTCCGCCACAGGCACCGTCCTCCGCGCCGACGTCAACGGCCAGATC
GTCATGCGCGCCTACCTGACCGGCACCCCAGAATGCAAATTCGGCCTGAACGACCGCCTCCTCCTAGACACCGGT
GAGACCTCTAGCAACATGAACAACCCAGGCGGCGGCAACGGAGTCAGCACCTCAAAGACAACGCGCGCCGCGGCA
GGCTCCGTCACGCTGGAAGACTGCCAGTTCCACCAGTGCGTGAAGCTGGGCCGATTTGACGCGGACCGCATCATC
TCCTTCGTGCCGCCGGATGGCGAGTTCGAGCTGATGCGCTACCGCGCCACCGAGAACGTCAACCTGCCCTTCAAG
GTGCACCCGATTGTGCGCGAGATCGGTACCACAAAGGTCGAGTACAGCGTCGCCATCAAGGCGAACTACAGCTCC
AAGCTCTTCGCTACGAATGTGGTTATTCGTATCCCCACGCCGCTTAATACTGCCAAGACTACGGAGCGCACGAGC
CAGGGCCGCGCCAAGTATGAACCAGAGCAGAACAATATCGTCTGGAAGATTGCCCGCTTCTCCGGACAGTCGGAG
TATGTGCTTAATGCTGAGGCAACGCTTACGACTATGACGCACCAGAAGGCTTGGAGTCGTCCGCCGTTGAGTCTT
TCGTTTAGTTTGCTTATGTTTACCTCTTCGGGTCTGCTGGTGCGCTATCTTAAGGTCTTTGAGAAGAGTAATTAC
AGCTCTGTCAAGTGGGTGCGCTATATGACTCGCGCAGGGAGTTATGAGATTCGGTTCTGA
Gene >Pro_DTO377G3_2|g3377.t1
ATGCTCTCGGGGATCCTCATATTTAACCAGAAGGGCGAAAACCTCATTTTTCGCGCCTTCCGTAGCGATTGCCGC
CCGCGTTTAGCCGACATCTTCCGCATCCAAGTCATCTCCAATCCCCAGGTGCGCTCGCCGATCCTGACCTTGGGC
TCGACGACCTTTAGCCATGTCAAGCACGAGAACATCTACTTGGTAGCTGTGACCAAGAGCAATGCCAATGCCGCG
CTGATTTTCGAGTTCCTCTACCGGCTGGTCATGCTGGGCAAGAGCTATTTCGGGAAGCTCGATGAGGAGGCCGTG
AAGAACAACTTCGTCCTGATTTACGAACTGCTCGATGGTATGTGGAAAAGGCTCAATGTTCTAGAAATGGAGCCT
AACAATTGGTGATACAGAAATTCTCGACTTCGGATACCCCCAGAACACCGATCCAGATACCCTGAAAATGTACAT
CACAACCGAAGGCGTCAAATCGGCCATCACCAACTCCCCATCAGACTCCGCCCGAATTACCCAACAAGCAACAGG
CGCGCTCTCCTGGCGCCGCTCCGACATAAAATACCGCAAAAACGAAGCCTTCGTCGACGTAATCGAAGATGTCAA
CCTCCTGATGTCCGCCACAGGCACCGTCCTCCGCGCCGACGTCAACGGCCAGATCGTCATGCGCGCCTACCTGAC
CGGCACCCCAGAATGCAAATTCGGCCTGAACGACCGCCTCCTCCTAGACACCGGTGAGACCTCTAGCAACATGAA
CAACCCAGGCGGCGGCAACGGAGTCAGCACCTCAAAGACAACGCGCGCCGCGGCAGGCTCCGTCACGCTGGAAGA
CTGCCAGTTCCACCAGTGCGTGAAGCTGGGCCGATTTGACGCGGACCGCATCATCTCCTTCGTGCCGCCGGATGG
CGAGTTCGAGCTGATGCGCTACCGCGCCACCGAGAACGTCAACCTGCCCTTCAAGGTGCACCCGATTGTGCGCGA
GATCGGTACCACAAAGGTCGAGTACAGCGTCGCCATCAAGGCGAACTACAGCTCCAAGCTCTTCGCTACGAATGT
GGTTATTCGTATCCCCACGCCGCTTAATACTGCCAAGACTACGGAGCGCACGAGCCAGGGCCGCGCCAAGTATGA
ACCAGAGCAGAACAATATCGTCTGGAAGATTGCCCGCTTCTCCGGACAGTCGGAGTATGTGCTTAATGCTGAGGC
AACGCTTACGACTATGACGCACCAGAAGGCTTGGAGTCGTCCGCCGTTGAGTCTTTCGTTTAGTTTGCTTATGTT
TACCTCTTCGGGTCTGCTGGTGCGCTATCTTAAGGTCTTTGAGAAGAGTAATTACAGCTCTGTCAAGTGGGTGCG
CTATATGACTCGCGCAGGGAGTTATGAGATTCGGTATGTGTTTCATCTTTTTGCTGTCATGGTTTTGGTCGCTGA
CTCAACTGCTTCATTAGGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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