Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3363.t1
Gene name
Locationscaffold_05:454208..456593
Strand-
Gene length (bp)2385
Transcript length (bp)1821
Coding sequence length (bp)1821
Protein length (aa) 607

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01476 LysM LysM domain 1.7E-01 335 375
PF01476 LysM LysM domain 3.8E-02 423 458

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3363.t1
MLFSFLRLCFVLLTAWTTWAAADFALYKNYDADALIAGLSLSSTCLAALNTTVSCNETAISLLGHGADIHFWTTA
EVENLCTTDCVSSLSFWKDNVATVCAEETTIQGNVVVKARALPLTFTYNSDLVCMKDSSSNWCFLVSQTWQGSDY
IRWDPTMCFADGDDNSTVAPECADPDFDVGDISDDMSALTNIYEEKLFCNECFLNLYRQRLLNPWLPVTNFTDYL
VDQFNLVQTNCSTTLPYSTSASTLYVGTATATTTTSVTTTGSSATTTPTCLGQMVQPLQNWLTCNDLCDTYNIST
GDARVATGDYACYFDEATCFPRPCEIDTVWDTPSCDGLATRYSNSTYTVTTAQLLSWNTNIQGSCSGIAAGQRVC
KSAPGGTFPKPNATITAPGATGEPTYYTAATAAYPTQSGTISECGNYYLVVAGDDCSTIDLRFGLNFSQLQEYNP
YLNSTCGNLWLNYDICVAPVTPETVSTDAQATAPRRKTAPVDLIMGARLVFPSSETAVVYTATAAMVPPIVVQGT
AILAVVTLIMAARPQMENVARILPETRPALVPSLGRAVPRLVIVEVPVTTVLGQTAIAVLVRRDVAQSIKEEFLS
VYTISK*
Coding >Pro_DTO377G3_2|g3363.t1
ATGTTATTCTCCTTCTTGAGACTCTGTTTTGTCCTGCTTACGGCATGGACAACTTGGGCTGCGGCCGATTTTGCG
CTGTACAAAAACTATGATGCAGACGCCTTGATTGCTGGGCTCTCTCTGAGCAGTACGTGTCTTGCAGCACTGAAC
ACCACCGTCTCTTGCAATGAAACCGCTATTAGCCTATTAGGACACGGGGCAGACATCCACTTCTGGACGACTGCT
GAGGTAGAGAACCTCTGCACGACAGACTGTGTCTCGTCCCTTAGTTTCTGGAAGGATAATGTTGCAACAGTCTGT
GCAGAAGAGACCACAATCCAGGGCAATGTCGTGGTCAAGGCGAGAGCGCTACCACTGACATTTACCTATAATTCC
GATCTTGTATGCATGAAGGACAGTTCATCAAATTGGTGTTTCCTGGTCTCTCAGACATGGCAAGGAAGTGACTAT
ATCCGTTGGGATCCAACAATGTGCTTCGCCGATGGTGATGACAACAGCACAGTCGCGCCTGAATGTGCCGATCCG
GATTTTGACGTCGGTGATATCAGTGATGACATGTCCGCTCTAACTAATATATATGAAGAGAAATTGTTCTGCAAT
GAGTGTTTCTTGAATCTGTATCGGCAACGTCTCCTGAATCCTTGGCTACCAGTTACCAATTTCACGGATTATTTA
GTCGATCAGTTCAACCTTGTTCAAACAAATTGCTCAACAACGCTGCCTTACAGCACTTCAGCCTCCACCTTATAC
GTAGGGACGGCAACGGCTACTACCACCACCAGCGTAACGACGACAGGTTCCTCCGCAACAACTACACCGACTTGT
CTGGGTCAAATGGTGCAGCCGCTGCAAAACTGGCTCACCTGCAATGATCTTTGCGATACGTACAATATATCAACA
GGTGACGCTAGAGTTGCCACTGGGGATTACGCTTGCTATTTCGACGAGGCTACCTGTTTCCCCCGTCCATGCGAG
ATCGATACGGTTTGGGATACACCAAGTTGTGACGGCCTTGCCACGAGATATTCCAACTCGACTTACACCGTGACC
ACTGCTCAATTGCTTAGCTGGAATACTAATATCCAGGGCAGTTGTTCAGGGATTGCAGCAGGACAGCGTGTATGT
AAAAGTGCTCCTGGAGGAACGTTTCCTAAACCCAACGCGACCATCACGGCGCCTGGTGCGACCGGCGAGCCTACT
TACTACACAGCAGCCACTGCGGCTTACCCGACCCAAAGTGGAACCATCAGCGAGTGCGGTAACTACTATCTCGTT
GTAGCCGGTGACGACTGTTCTACCATCGACCTGCGCTTCGGTCTGAACTTTAGCCAGTTGCAAGAGTATAACCCG
TACCTTAACTCCACCTGCGGCAACCTGTGGCTTAATTACGACATATGCGTCGCCCCTGTCACCCCTGAGACAGTC
TCAACGGACGCACAGGCAACGGCACCGCGACGCAAGACGGCACCTGTGGACCTGATTATGGGGGCACGACTTGTA
TTCCCAAGTTCGGAAACTGCTGTAGTATATACGGCTACTGCGGCAATGGTACCACCTATTGTGGTGCAGGGAACT
GCTATTCTGGCAGTTGTGACACTGATAATGGCGGCCCGTCCACAAATGGAGAATGTGGCCCGAATTTTGCCGGAA
ACAAGACCTGCACTGGTACCCAGTTTGGGACGTGCTGTTCCGCGTCTGGTTATTGTGGAAGTACCAGTGACTACT
GTTCTGGGTCAAACTGCTATAGCGGTGCTTGTACGTCGTGATGTTGCTCAGTCTATAAAAGAGGAGTTTCTCAGT
GTATATACCATTTCCAAGTAA
Transcript >Pro_DTO377G3_2|g3363.t1
ATGTTATTCTCCTTCTTGAGACTCTGTTTTGTCCTGCTTACGGCATGGACAACTTGGGCTGCGGCCGATTTTGCG
CTGTACAAAAACTATGATGCAGACGCCTTGATTGCTGGGCTCTCTCTGAGCAGTACGTGTCTTGCAGCACTGAAC
ACCACCGTCTCTTGCAATGAAACCGCTATTAGCCTATTAGGACACGGGGCAGACATCCACTTCTGGACGACTGCT
GAGGTAGAGAACCTCTGCACGACAGACTGTGTCTCGTCCCTTAGTTTCTGGAAGGATAATGTTGCAACAGTCTGT
GCAGAAGAGACCACAATCCAGGGCAATGTCGTGGTCAAGGCGAGAGCGCTACCACTGACATTTACCTATAATTCC
GATCTTGTATGCATGAAGGACAGTTCATCAAATTGGTGTTTCCTGGTCTCTCAGACATGGCAAGGAAGTGACTAT
ATCCGTTGGGATCCAACAATGTGCTTCGCCGATGGTGATGACAACAGCACAGTCGCGCCTGAATGTGCCGATCCG
GATTTTGACGTCGGTGATATCAGTGATGACATGTCCGCTCTAACTAATATATATGAAGAGAAATTGTTCTGCAAT
GAGTGTTTCTTGAATCTGTATCGGCAACGTCTCCTGAATCCTTGGCTACCAGTTACCAATTTCACGGATTATTTA
GTCGATCAGTTCAACCTTGTTCAAACAAATTGCTCAACAACGCTGCCTTACAGCACTTCAGCCTCCACCTTATAC
GTAGGGACGGCAACGGCTACTACCACCACCAGCGTAACGACGACAGGTTCCTCCGCAACAACTACACCGACTTGT
CTGGGTCAAATGGTGCAGCCGCTGCAAAACTGGCTCACCTGCAATGATCTTTGCGATACGTACAATATATCAACA
GGTGACGCTAGAGTTGCCACTGGGGATTACGCTTGCTATTTCGACGAGGCTACCTGTTTCCCCCGTCCATGCGAG
ATCGATACGGTTTGGGATACACCAAGTTGTGACGGCCTTGCCACGAGATATTCCAACTCGACTTACACCGTGACC
ACTGCTCAATTGCTTAGCTGGAATACTAATATCCAGGGCAGTTGTTCAGGGATTGCAGCAGGACAGCGTGTATGT
AAAAGTGCTCCTGGAGGAACGTTTCCTAAACCCAACGCGACCATCACGGCGCCTGGTGCGACCGGCGAGCCTACT
TACTACACAGCAGCCACTGCGGCTTACCCGACCCAAAGTGGAACCATCAGCGAGTGCGGTAACTACTATCTCGTT
GTAGCCGGTGACGACTGTTCTACCATCGACCTGCGCTTCGGTCTGAACTTTAGCCAGTTGCAAGAGTATAACCCG
TACCTTAACTCCACCTGCGGCAACCTGTGGCTTAATTACGACATATGCGTCGCCCCTGTCACCCCTGAGACAGTC
TCAACGGACGCACAGGCAACGGCACCGCGACGCAAGACGGCACCTGTGGACCTGATTATGGGGGCACGACTTGTA
TTCCCAAGTTCGGAAACTGCTGTAGTATATACGGCTACTGCGGCAATGGTACCACCTATTGTGGTGCAGGGAACT
GCTATTCTGGCAGTTGTGACACTGATAATGGCGGCCCGTCCACAAATGGAGAATGTGGCCCGAATTTTGCCGGAA
ACAAGACCTGCACTGGTACCCAGTTTGGGACGTGCTGTTCCGCGTCTGGTTATTGTGGAAGTACCAGTGACTACT
GTTCTGGGTCAAACTGCTATAGCGGTGCTTGTACGTCGTGATGTTGCTCAGTCTATAAAAGAGGAGTTTCTCAGT
GTATATACCATTTCCAAGTAA
Gene >Pro_DTO377G3_2|g3363.t1
ATGTTATTCTCCTTCTTGAGACTCTGTTTTGTCCTGCTTACGGCATGGACAACTTGGGCTGCGGCCGATTTTGCG
CTGTACAAAAACTATGATGCAGACGCCTTGATTGCTGGGCTCTCTCTGAGCAGTACGTGTCTTGCAGCACTGTGA
GTACTTGCCTCTGGTTCCGTCTCCCTGAAATGTCTTATCCCTTTAACACCTCACCAGGAACACCACCGTCTCTTG
CAATGAAACCGCTATTAGCCTATTAGGACACGGGGCAGACATCCACTGTAAGCTTGTTATGTCCAAACATGTTGT
TGTCTGCCAACGAAGAAGCGAAGCTAATAAATAAAGTCTGGACGACTGCTGAGGTAGAGAACCTCTGCACGACAG
ACTGTGTCTCGTCCCTTAGTTTCTGGAAGGATAATGTTGCAACAGTCTGTGCAGAAGAGACCACAATCCAGGGCA
ATGTCGTGGTCAAGGCGAGAGCGCTACCACTGACATTTACCTATAATTCCGATCTTGTATGCATGAAGGACAGTT
CATCAAATTGGTGTTTCCTGGTCTCTCAGACATGGCAAGGAAGTGACTATATCCGTTGGGATCCAACAATGTGCT
TCGCCGATGGTGATGACAACAGCACAGTCGCGCCTGAATGTGCCGATCCGGATTTTGACGTCGGTGATATCAGTG
ATGACATGTCCGCTCTAACTAATATATATGAAGAGAAATTGGTATGTGAACTCCCTATGAAGTACATCAGTGCCA
TCGAGGTTGTCTACTAACTGGGCGTAGTTCTGCAATGAGTGTTTCTTGAATCTGTATCGGCAACGTCTCCTGAAT
CCTTGGCTACCAGTTACCAATTTCACGGATTATTTAGTCGATCAGTTCAACCTTGTTCAAACAAATTGCTCAACA
ACGCTGCCTTACAGCACTTCAGCCTCCACCTTATACGTAGGGACGGCAACGGCTACTACCACCACCAGCGTAACG
ACGACAGGTTCCTCCGCAACAACTACACCGACTTGTCTGGGTCAAATGGTGCAGCCGCTGCAAAACTGGCTCACC
TGCAATGATCTTTGCGATACGTATGGATGGCATTCCCCCAATAGTTGGTGGGCTGGCTGATTTCTAATGCGCTGC
ATGCGGCAATTAGGTACAATATATCAACAGGTGACGCTAGAGTTGCCACTGGGGATTACGCTTGCTATTTCGACG
AGGCTACCTGTTTCCCCCGTCCATGCGAGATCGATACGGTTTGGGATACACCAAGTTGGTATGTAGGGCATAATG
GTTGCCTGAAGCCACGAGACCATAATCTGTGCTAAGTCCTCTGAAAATAGTGACGGCCTTGCCACGAGATATTCC
AACTCGACTTACACCGTGACCACTGCTCAATTGCTTAGCTGGAATACTAATATCCAGGGCAGTTGTTCAGGGATT
GCAGCAGGACAGCGTGTATGTAAAAGGTAAGTCTAAGATCAAGAAGGACACAATAGAGGCATTTGCGGCATTGAG
TGATGCTAACCAGACTCGGCGAGAAAAAAGTGCTCCTGGAGGAACGTTTCCTAAACCCAACGCGACCATCACGGC
GCCTGGTGCGACCGGCGAGCCTACTTACTACACAGCAGCCACTGCGGCTTACCCGACCCAAAGTGGAACCATCAG
CGAGTGCGGTAACTACTATCTCGTTGTAGCCGGTGACGACTGTTCTACCATCGACCTGCGCTTCGGTCTGAACTT
TAGCCAGTTGCAAGAGTATAACCCGTACCTTAACTCCACCTGCGGCAACCTGTGGCTTAATTACGACATATGCGT
CGCCCCTGTCACCCCTGAGACAGTCTCAACGGACGGTACGTGCCCTGCGGGGGTTACCTGTGTTGGAAGTGCCTT
TGGCGACTGCTGCTCGCCATTTGGCTACTGCGGAACCGGGTCAGATTACTGTATCAGCACAGGCAACGGCACCGC
GACGCAAGACGGCACCTGTGGACCTGATTATGGGGGCACGACTTGTATTCCCAAGTTCGGAAACTGCTGTAGTAT
ATACGTAAGTGATGCAGTATCCATTCATGACCATCCTTCCTATTCACTGCAGTCGCTGATAATAGACACAGGGCT
ACTGCGGCAATGGTACCACCTATTGTGGTGCAGGGAACTGCTATTCTGGCAGTTGTGACACTGATAATGGCGGCC
CGTCCACAAATGGAGAATGTGGCCCGAATTTTGCCGGAAACAAGACCTGCACTGGTACCCAGTTTGGGACGTGCT
GTTCCGCGTCTGGTTATTGTGGAAGTACCAGTGACTACTGTTCTGGGTCAAACTGCTATAGCGGTGCTTGTACGT
CGTGATGTTGCTCAGTCTATAAAAGAGGAGTTTCTCAGTGTATATACCATTTCCAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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