Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g3346.t1
Gene name
Location	scaffold_05:410265..411419
Strand	-
Gene length (bp)	1154
Transcript length (bp)	1086
Coding sequence length (bp)	1086
Protein length (aa)	362

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03986	Autophagy_N	Autophagocytosis associated protein (Atg3), N-terminal domain	5.8E-46	4	164
PF10381	Autophagy_C	Autophagocytosis associated protein C-terminal	2.4E-15	335	359
PF03987	Autophagy_act_C	Autophagocytosis associated protein, active-site domain	4.7E-13	191	253

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3346.t1 MNILHSTLSTWRDRLAPVSRTSTFRNTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPDGKQFLVTRG VPCHRRLNDNFAGDAGLEDEIVRDFLSGGDGEGTPDNGEDGWLRTGGGRDAGADHDKQEARIRDVRTVDESGNLG EQEEEDDIPDMEDDDDDDEAIIRETDNHSGTQSLRTYTLYITYSNFYRTPRLYLSGYLSPSEPLPPHLMMEDIVG DYKDKTVTLEDFPWFEGSVKMASVHPCRHASVMKTLLDRADAALKLRRDKLKQTQSREEANRVLRAGGGLEGLVD ETNNLSLGDSNNGHPGGDEWEMLQHDEEEQVAIRVDQYLVVFLKFIASVTPGIEHDFTMGV*
Coding	>Pro_DTO377G3_2\|g3346.t1 ATGAATATCCTGCACTCTACATTGTCAACTTGGCGGGACCGCCTGGCCCCGGTATCGCGCACTTCTACCTTCCGT AACACCGGCCAAATCACTCCCGAGGAGTTTGTTCTCGCCGGAGATTATCTAGTCTACAAGTTCCCCACATGGTCA TGGGCCGACGCATCGAGTCCGGCAAAACGAGTCTCCTACCTCCCAGATGGCAAGCAGTTTCTGGTTACTCGTGGA GTACCATGCCATCGGAGACTGAACGACAACTTTGCCGGGGATGCAGGACTCGAGGATGAGATTGTGAGGGATTTC CTATCTGGCGGTGACGGCGAAGGCACACCGGATAATGGAGAGGATGGATGGTTGCGGACTGGCGGTGGGCGTGAT GCTGGGGCAGATCATGATAAGCAAGAAGCTCGGATCCGCGACGTGCGAACCGTCGATGAATCCGGGAATCTGGGC GAGCAGGAGGAGGAGGATGATATCCCCGATATGGAGGATGATGACGATGACGATGAAGCTATCATCCGAGAGACC GATAATCATTCAGGGACACAATCTCTCCGCACGTACACCCTTTACATTACATACTCAAACTTCTACCGCACACCC CGCCTCTACCTGTCCGGCTATTTGTCGCCATCCGAACCGCTTCCGCCACATCTGATGATGGAGGATATTGTCGGC GACTACAAAGACAAGACCGTGACGCTAGAGGACTTCCCATGGTTCGAGGGCAGCGTCAAGATGGCCAGTGTACAC CCATGCCGCCACGCCTCTGTGATGAAGACACTCTTGGATCGTGCCGATGCCGCACTCAAGCTTCGCCGTGACAAG CTCAAACAGACGCAGTCGCGCGAGGAAGCGAACCGCGTTCTCCGGGCAGGCGGCGGGCTGGAGGGCTTGGTGGAT GAGACCAACAACCTGTCGCTCGGGGACTCCAACAACGGACATCCTGGCGGGGATGAGTGGGAGATGCTGCAACAT GACGAGGAAGAACAGGTCGCGATCCGTGTAGACCAGTACCTGGTTGTGTTCCTCAAGTTCATTGCCAGTGTGACG CCGGGCATTGAGCACGACTTTACGATGGGGGTATAA
Transcript	>Pro_DTO377G3_2\|g3346.t1 ATGAATATCCTGCACTCTACATTGTCAACTTGGCGGGACCGCCTGGCCCCGGTATCGCGCACTTCTACCTTCCGT AACACCGGCCAAATCACTCCCGAGGAGTTTGTTCTCGCCGGAGATTATCTAGTCTACAAGTTCCCCACATGGTCA TGGGCCGACGCATCGAGTCCGGCAAAACGAGTCTCCTACCTCCCAGATGGCAAGCAGTTTCTGGTTACTCGTGGA GTACCATGCCATCGGAGACTGAACGACAACTTTGCCGGGGATGCAGGACTCGAGGATGAGATTGTGAGGGATTTC CTATCTGGCGGTGACGGCGAAGGCACACCGGATAATGGAGAGGATGGATGGTTGCGGACTGGCGGTGGGCGTGAT GCTGGGGCAGATCATGATAAGCAAGAAGCTCGGATCCGCGACGTGCGAACCGTCGATGAATCCGGGAATCTGGGC GAGCAGGAGGAGGAGGATGATATCCCCGATATGGAGGATGATGACGATGACGATGAAGCTATCATCCGAGAGACC GATAATCATTCAGGGACACAATCTCTCCGCACGTACACCCTTTACATTACATACTCAAACTTCTACCGCACACCC CGCCTCTACCTGTCCGGCTATTTGTCGCCATCCGAACCGCTTCCGCCACATCTGATGATGGAGGATATTGTCGGC GACTACAAAGACAAGACCGTGACGCTAGAGGACTTCCCATGGTTCGAGGGCAGCGTCAAGATGGCCAGTGTACAC CCATGCCGCCACGCCTCTGTGATGAAGACACTCTTGGATCGTGCCGATGCCGCACTCAAGCTTCGCCGTGACAAG CTCAAACAGACGCAGTCGCGCGAGGAAGCGAACCGCGTTCTCCGGGCAGGCGGCGGGCTGGAGGGCTTGGTGGAT GAGACCAACAACCTGTCGCTCGGGGACTCCAACAACGGACATCCTGGCGGGGATGAGTGGGAGATGCTGCAACAT GACGAGGAAGAACAGGTCGCGATCCGTGTAGACCAGTACCTGGTTGTGTTCCTCAAGTTCATTGCCAGTGTGACG CCGGGCATTGAGCACGACTTTACGATGGGGGTATAA
Gene	>Pro_DTO377G3_2\|g3346.t1 ATGAATATCCTGCACTCTACATTGTCAACTTGGCGGGACCGCCTGGCCCCGGTATCGCGCACTTCTACCTTCCGT AACACCGGCCAAATCACTCCCGAGGAGTTTGTTCTCGCCGGAGATTATCTAGTCTACAAGTTCCCCACATGGTCA TGGGCCGACGCATCGAGTCCGGCAAAACGAGTCTCCTACCTCCCAGATGGCAAGCAGTTTCTGGTTACTCGTGGA GTACCATGCCATCGGAGACTGAACGACAACTTTGCCGGGGATGCAGGACTCGAGGATGAGATTGTGAGGGATTTC CTATCTGGCGGTGACGGCGAAGGCACACCGGATAATGGAGAGGATGGATGGTTGCGGACTGGCGGTGGGCGTGAT GCTGGGGCAGATCATGATAAGCAAGAAGCTCGGATCCGCGACGTGCGAACCGTCGATGAATCCGGGAATCTGGGC GAGCAGGAGGAGGAGGATGATATCCCCGATATGGAGGATGATGACGATGACGATGAAGCTATCATCCGAGAGACC GATAATCATTCAGGGACACAGTGAGTGCCATTTTCCTATCTGCAACATCACCTTTCTCTTTTCTAACCGTGACTT GTTATCGCTCCAGATCTCTCCGCACGTACACCCTTTACATTACATACTCAAACTTCTACCGCACACCCCGCCTCT ACCTGTCCGGCTATTTGTCGCCATCCGAACCGCTTCCGCCACATCTGATGATGGAGGATATTGTCGGCGACTACA AAGACAAGACCGTGACGCTAGAGGACTTCCCATGGTTCGAGGGCAGCGTCAAGATGGCCAGTGTACACCCATGCC GCCACGCCTCTGTGATGAAGACACTCTTGGATCGTGCCGATGCCGCACTCAAGCTTCGCCGTGACAAGCTCAAAC AGACGCAGTCGCGCGAGGAAGCGAACCGCGTTCTCCGGGCAGGCGGCGGGCTGGAGGGCTTGGTGGATGAGACCA ACAACCTGTCGCTCGGGGACTCCAACAACGGACATCCTGGCGGGGATGAGTGGGAGATGCTGCAACATGACGAGG AAGAACAGGTCGCGATCCGTGTAGACCAGTACCTGGTTGTGTTCCTCAAGTTCATTGCCAGTGTGACGCCGGGCA TTGAGCACGACTTTACGATGGGGGTATAA

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