Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3339.t1
Gene name
Locationscaffold_05:391867..393080
Strand+
Gene length (bp)1213
Transcript length (bp)678
Coding sequence length (bp)678
Protein length (aa) 226

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 6.9E-18 76 199

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3339.t1
MSARVQAKSKLISRGPLDPSEARWARMVKTTYTDPLGVERTWESAERTKRGLALVGLPSRLPGPQQTRPDGIDLD
GVGIVAILNKDSGSELLLQKQYRPPIDAVVIEVPAGLIDAGETPEQCAVRELKEETGYVGVAEQTSPVMFNDPGL
CNTNLHMVHVRVDMSLPENKNPKPELEDNEFIECFTIPLTSLFDELKKLEKEGYAIDARIGTLAEGIELAKKWKL
*
Coding >Pro_DTO377G3_2|g3339.t1
ATGTCAGCTCGCGTACAGGCCAAGTCGAAACTCATTTCGCGGGGACCATTGGACCCCAGCGAAGCCCGCTGGGCT
CGAATGGTGAAGACAACATACACCGACCCCCTGGGTGTCGAGCGAACATGGGAATCAGCTGAGCGCACGAAACGG
GGACTAGCATTAGTGGGGCTCCCCAGTCGACTCCCGGGACCTCAACAGACTCGTCCTGACGGGATTGATCTTGAT
GGCGTTGGGATCGTCGCTATTTTGAACAAGGATTCTGGCTCGGAGCTGCTTCTGCAGAAGCAATACCGCCCTCCC
ATTGATGCTGTTGTCATTGAGGTTCCTGCGGGGCTTATCGATGCGGGCGAGACGCCTGAGCAATGTGCTGTTCGA
GAACTTAAGGAGGAGACTGGTTATGTTGGCGTCGCGGAGCAGACTAGTCCGGTTATGTTTAACGACCCAGGGCTT
TGCAATACCAACCTGCATATGGTCCACGTCCGGGTTGATATGTCTCTTCCCGAGAACAAGAACCCGAAGCCTGAG
CTCGAGGATAACGAGTTCATTGAATGCTTTACTATTCCTTTGACATCGTTGTTCGACGAGTTAAAGAAGCTTGAA
AAAGAGGGTTATGCCATTGATGCCAGGATCGGAACCCTAGCCGAGGGCATTGAACTCGCAAAGAAATGGAAGTTG
TGA
Transcript >Pro_DTO377G3_2|g3339.t1
ATGTCAGCTCGCGTACAGGCCAAGTCGAAACTCATTTCGCGGGGACCATTGGACCCCAGCGAAGCCCGCTGGGCT
CGAATGGTGAAGACAACATACACCGACCCCCTGGGTGTCGAGCGAACATGGGAATCAGCTGAGCGCACGAAACGG
GGACTAGCATTAGTGGGGCTCCCCAGTCGACTCCCGGGACCTCAACAGACTCGTCCTGACGGGATTGATCTTGAT
GGCGTTGGGATCGTCGCTATTTTGAACAAGGATTCTGGCTCGGAGCTGCTTCTGCAGAAGCAATACCGCCCTCCC
ATTGATGCTGTTGTCATTGAGGTTCCTGCGGGGCTTATCGATGCGGGCGAGACGCCTGAGCAATGTGCTGTTCGA
GAACTTAAGGAGGAGACTGGTTATGTTGGCGTCGCGGAGCAGACTAGTCCGGTTATGTTTAACGACCCAGGGCTT
TGCAATACCAACCTGCATATGGTCCACGTCCGGGTTGATATGTCTCTTCCCGAGAACAAGAACCCGAAGCCTGAG
CTCGAGGATAACGAGTTCATTGAATGCTTTACTATTCCTTTGACATCGTTGTTCGACGAGTTAAAGAAGCTTGAA
AAAGAGGGTTATGCCATTGATGCCAGGATCGGAACCCTAGCCGAGGGCATTGAACTCGCAAAGAAATGGAAGTTG
TGA
Gene >Pro_DTO377G3_2|g3339.t1
ATGTCAGCTCGCGTACAGGCCAAGTCGAAACTCATTTCGCGGGGACCATTGGTACGTTTTTCTAATCTCCCTTGG
GTCTCTTCAGCGAATCCCAAGTCCATTATATAGACAGAGCGCGGAGGATATCACCAAAAAAGCGCCAATGCACGA
CTGACACGTCTCACCAAACAGGACCCCAGCGAAGCCCGCTGGGCTCGAATGGTGAAGACAACATACACCGACCCC
CTGGGTGTCGAGCGAACATGGGAATCAGCTGAGCGCACGGTAAGACCTATCCCTTGTTCTGTGCTTATTGTATTA
TGCGCGCTGTTGGTAGATGTCTGGGGTATATGTATGTATCGCACCTATCGCAGGTATCCACCTGTCTGCATGACT
GTCACGAAAGCCAAGCTACCCAACTAAGATCCGGCCTCATCTAAATCTAGAAACGGGGACTAGCATTAGTGGGGC
TCCCCAGTCGACTCCCGGGACCTCAACAGGTGGCATAAACCCGGGCGTTGCCTGGCGCTGTATCAACTAAAACCA
CATGACCGGTTGCCTTGCGATGTGTATCGGACCCATTGGTCACCATCTAACTCAAAAATCTATCAGAGCCTCCGT
TTGAAATTAGACTTCGGATTTGATGCTAACCGCGTTTTCCTAGACTCGTCCTGACGGGATTGATCTTGATGGCGT
TGGGATCGTCGCTATTTTGAACAAGGATTCTGGCTCGGAGCTGCTTCTGCAGAAGCAATACCGCCCTCCCATTGA
TGCTGTTGTCATTGAGGTTCCTGCGGGGCTTATCGATGCGGGCGAGACGCCTGAGCAATGTGCTGTTCGAGAACT
TAAGGAGGAGACTGGTTATGTTGGCGTCGCGGAGCAGACTAGTCCGGTTATGTTTAACGGTACGTGAGATTGCTA
TGGGATTTGTTTTGTTCTCGCGGGTTATTTTACTTCTTGTAAAGCTAAAGCTGACAAACATATGTGGTTATCAGA
CCCAGGGCTTTGCAATACCAACCTGCATATGGTCCACGTCCGGGTTGATATGTCTCTTCCCGAGAACAAGAACCC
GAAGCCTGAGCTCGAGGATAACGAGTTCATTGAATGCTTTACTATTCCTTTGACATCGTTGTTCGACGAGTTAAA
GAAGCTTGAAAAAGAGGGTTATGCCATTGATGCCAGGATCGGAACCCTAGCCGAGGGCATTGAACTCGCAAAGAA
ATGGAAGTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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