Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3337.t1
Gene name
Locationscaffold_05:388330..389142
Strand+
Gene length (bp)812
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13419 HAD_2 Haloacid dehalogenase-like hydrolase 5.0E-18 7 201
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 4.6E-06 7 196
PF13242 Hydrolase_like HAD-hyrolase-like 2.6E-05 158 215

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup3126
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g3598.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g1111.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g8756.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g5339.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g5933.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g5413.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g8225.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g4384.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g5928.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g1735.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g5112.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g5540.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g2923.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g700.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g4029.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g5132.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g7340.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g6807.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g7150.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g5481.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g4288.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g4921.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5140.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g6200.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g8017.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g2886.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g6079.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g3391.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g6152.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g6620.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g3111.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g8555.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g7666.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g3337.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3337.t1
MTKITEIFFDCDNTLVLSEELAFEACADLANEILEANNIPDRYTGDQLIKDFVGQNFRGMLISLQQKYDFQIDED
KLEEYVIREEDQVIAKLNAKAKSCIGATEELEKVFAAKKYGLAVVSSSALRRVLASIRKVGQDKFFDENKVFSAA
SSLPKPTSKPDPAIYLYALEQVGKRASETVAIEDSKSGALSAVRAGIPVIAYVGSYNGEDTQKAMAKALTDIGAK
SVMYHWSEFEKCMKEIENDVSVDVQSTL*
Coding >Pro_DTO377G3_2|g3337.t1
ATGACTAAGATCACGGAAATCTTCTTCGATTGCGACAACACGCTGGTCCTCTCAGAGGAGCTAGCCTTCGAGGCT
TGTGCCGATCTGGCCAATGAGATCCTGGAGGCCAACAACATCCCCGACCGTTACACCGGCGACCAACTCATCAAA
GACTTTGTCGGCCAGAACTTCCGCGGCATGCTGATCTCTCTACAGCAGAAATATGACTTCCAGATCGACGAGGAC
AAGCTTGAAGAATACGTCATCAGAGAAGAGGACCAAGTCATTGCCAAGTTGAACGCCAAGGCTAAAAGCTGCATC
GGTGCCACCGAGGAGCTGGAAAAGGTTTTCGCCGCGAAGAAGTACGGTCTTGCCGTCGTCTCCTCGTCTGCGTTG
CGCCGCGTGCTCGCTTCCATCCGGAAGGTCGGTCAGGACAAGTTCTTTGACGAGAACAAGGTCTTCAGCGCCGCC
AGCTCCCTGCCAAAGCCGACCTCCAAGCCCGACCCCGCTATCTACCTGTATGCTCTCGAGCAGGTCGGCAAGCGT
GCTTCCGAGACTGTCGCCATCGAGGACAGCAAGTCTGGTGCTCTTTCTGCGGTTCGTGCCGGTATTCCCGTGATT
GCGTACGTTGGCAGCTACAATGGCGAAGATACGCAGAAGGCAATGGCGAAGGCCCTGACTGACATTGGCGCGAAG
AGCGTCATGTATCATTGGTCAGAGTTTGAGAAGTGTATGAAGGAAATCGAGAATGATGTCAGCGTCGATGTCCAG
TCGACCCTTTAA
Transcript >Pro_DTO377G3_2|g3337.t1
ATGACTAAGATCACGGAAATCTTCTTCGATTGCGACAACACGCTGGTCCTCTCAGAGGAGCTAGCCTTCGAGGCT
TGTGCCGATCTGGCCAATGAGATCCTGGAGGCCAACAACATCCCCGACCGTTACACCGGCGACCAACTCATCAAA
GACTTTGTCGGCCAGAACTTCCGCGGCATGCTGATCTCTCTACAGCAGAAATATGACTTCCAGATCGACGAGGAC
AAGCTTGAAGAATACGTCATCAGAGAAGAGGACCAAGTCATTGCCAAGTTGAACGCCAAGGCTAAAAGCTGCATC
GGTGCCACCGAGGAGCTGGAAAAGGTTTTCGCCGCGAAGAAGTACGGTCTTGCCGTCGTCTCCTCGTCTGCGTTG
CGCCGCGTGCTCGCTTCCATCCGGAAGGTCGGTCAGGACAAGTTCTTTGACGAGAACAAGGTCTTCAGCGCCGCC
AGCTCCCTGCCAAAGCCGACCTCCAAGCCCGACCCCGCTATCTACCTGTATGCTCTCGAGCAGGTCGGCAAGCGT
GCTTCCGAGACTGTCGCCATCGAGGACAGCAAGTCTGGTGCTCTTTCTGCGGTTCGTGCCGGTATTCCCGTGATT
GCGTACGTTGGCAGCTACAATGGCGAAGATACGCAGAAGGCAATGGCGAAGGCCCTGACTGACATTGGCGCGAAG
AGCGTCATGTATCATTGGTCAGAGTTTGAGAAGTGTATGAAGGAAATCGAGAATGATGTCAGCGTCGATGTCCAG
TCGACCCTTTAA
Gene >Pro_DTO377G3_2|g3337.t1
ATGACTAAGGTACGATCACGATCTATCCCATTAGAGACCCACACTAACGGGCACTGCAGATCACGGAAATCTTCT
TCGATTGCGACAACACGCTGGTCCTCTCAGAGGAGCTAGCCTTCGAGGCTTGTGCCGATCTGGCCAATGAGATCC
TGGAGGCCAACAACATCCCCGACCGTTACACCGGCGACCAACTCATCAAAGACTTTGTCGGCCAGAACTTCCGCG
GCATGCTGATCTCTCTACAGCAGAAATATGACTTCCAGATCGACGAGGACAAGCTTGAAGAATACGTCATCAGAG
AAGAGGACCAAGTCATTGCCAAGTTGAACGCCAAGGCTAAAAGCTGCATCGGTGCCACCGAGGAGCTGGAAAAGG
TTTTCGCCGCGAAGAAGTACGGTCTTGCCGTCGTCTCCTCGTCTGCGTTGCGCCGCGTGCTCGCTTCCATCCGGA
AGGTCGGTCAGGACAAGTTCTTTGACGAGAACAAGGTCTTCAGCGCCGCCAGCTCCCTGCCAAAGCCGACCTCCA
AGCCCGACCCCGCTATCTACCTGTATGCTCTCGAGCAGGTCGGCAAGCGTGCTTCCGAGACTGTCGCCATCGAGG
ACAGCAAGTCTGGTGCTCTTTCTGCGGTTCGTGCCGGTATTCCCGTGATTGCGTACGTTGGCAGCTACAATGGCG
AAGATACGCAGAAGGCAATGGCGAAGGCCCTGACTGACATTGGCGCGAAGAGCGTCATGTATCATTGGTCAGAGT
TTGAGAAGTGTATGAAGGAAATCGAGAATGATGTCAGCGTCGATGTCCAGTCGACCCTTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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