Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3337.t1
Gene name
Locationscaffold_05:388330..389142
Strand+
Gene length (bp)812
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13419 HAD_2 Haloacid dehalogenase-like hydrolase 4.0E-18 7 201
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 4.2E-06 7 196
PF13242 Hydrolase_like HAD-hyrolase-like 1.3E-05 158 215

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3337.t1
MTKITEIFFDCDNTLVLSEELAFEACADLANEILEANNIPDRYTGDQLIKDFVGQNFRGMLISLQQKYDFQIDED
KLEEYVIREEDQVIAKLNAKAKSCIGATEELEKVFAAKKYGLAVVSSSALRRVLASIRKVGQDKFFDENKVFSAA
SSLPKPTSKPDPAIYLYALEQVGKRASETVAIEDSKSGALSAVRAGIPVIAYVGSYNGEDTQKAMAKALTDIGAK
SVMYHWSEFEKCMKEIENDVSVDVQSTL*
Coding >Pro_DTO377G3_2|g3337.t1
ATGACTAAGATCACGGAAATCTTCTTCGATTGCGACAACACGCTGGTCCTCTCAGAGGAGCTAGCCTTCGAGGCT
TGTGCCGATCTGGCCAATGAGATCCTGGAGGCCAACAACATCCCCGACCGTTACACCGGCGACCAACTCATCAAA
GACTTTGTCGGCCAGAACTTCCGCGGCATGCTGATCTCTCTACAGCAGAAATATGACTTCCAGATCGACGAGGAC
AAGCTTGAAGAATACGTCATCAGAGAAGAGGACCAAGTCATTGCCAAGTTGAACGCCAAGGCTAAAAGCTGCATC
GGTGCCACCGAGGAGCTGGAAAAGGTTTTCGCCGCGAAGAAGTACGGTCTTGCCGTCGTCTCCTCGTCTGCGTTG
CGCCGCGTGCTCGCTTCCATCCGGAAGGTCGGTCAGGACAAGTTCTTTGACGAGAACAAGGTCTTCAGCGCCGCC
AGCTCCCTGCCAAAGCCGACCTCCAAGCCCGACCCCGCTATCTACCTGTATGCTCTCGAGCAGGTCGGCAAGCGT
GCTTCCGAGACTGTCGCCATCGAGGACAGCAAGTCTGGTGCTCTTTCTGCGGTTCGTGCCGGTATTCCCGTGATT
GCGTACGTTGGCAGCTACAATGGCGAAGATACGCAGAAGGCAATGGCGAAGGCCCTGACTGACATTGGCGCGAAG
AGCGTCATGTATCATTGGTCAGAGTTTGAGAAGTGTATGAAGGAAATCGAGAATGATGTCAGCGTCGATGTCCAG
TCGACCCTTTAA
Transcript >Pro_DTO377G3_2|g3337.t1
ATGACTAAGATCACGGAAATCTTCTTCGATTGCGACAACACGCTGGTCCTCTCAGAGGAGCTAGCCTTCGAGGCT
TGTGCCGATCTGGCCAATGAGATCCTGGAGGCCAACAACATCCCCGACCGTTACACCGGCGACCAACTCATCAAA
GACTTTGTCGGCCAGAACTTCCGCGGCATGCTGATCTCTCTACAGCAGAAATATGACTTCCAGATCGACGAGGAC
AAGCTTGAAGAATACGTCATCAGAGAAGAGGACCAAGTCATTGCCAAGTTGAACGCCAAGGCTAAAAGCTGCATC
GGTGCCACCGAGGAGCTGGAAAAGGTTTTCGCCGCGAAGAAGTACGGTCTTGCCGTCGTCTCCTCGTCTGCGTTG
CGCCGCGTGCTCGCTTCCATCCGGAAGGTCGGTCAGGACAAGTTCTTTGACGAGAACAAGGTCTTCAGCGCCGCC
AGCTCCCTGCCAAAGCCGACCTCCAAGCCCGACCCCGCTATCTACCTGTATGCTCTCGAGCAGGTCGGCAAGCGT
GCTTCCGAGACTGTCGCCATCGAGGACAGCAAGTCTGGTGCTCTTTCTGCGGTTCGTGCCGGTATTCCCGTGATT
GCGTACGTTGGCAGCTACAATGGCGAAGATACGCAGAAGGCAATGGCGAAGGCCCTGACTGACATTGGCGCGAAG
AGCGTCATGTATCATTGGTCAGAGTTTGAGAAGTGTATGAAGGAAATCGAGAATGATGTCAGCGTCGATGTCCAG
TCGACCCTTTAA
Gene >Pro_DTO377G3_2|g3337.t1
ATGACTAAGGTACGATCACGATCTATCCCATTAGAGACCCACACTAACGGGCACTGCAGATCACGGAAATCTTCT
TCGATTGCGACAACACGCTGGTCCTCTCAGAGGAGCTAGCCTTCGAGGCTTGTGCCGATCTGGCCAATGAGATCC
TGGAGGCCAACAACATCCCCGACCGTTACACCGGCGACCAACTCATCAAAGACTTTGTCGGCCAGAACTTCCGCG
GCATGCTGATCTCTCTACAGCAGAAATATGACTTCCAGATCGACGAGGACAAGCTTGAAGAATACGTCATCAGAG
AAGAGGACCAAGTCATTGCCAAGTTGAACGCCAAGGCTAAAAGCTGCATCGGTGCCACCGAGGAGCTGGAAAAGG
TTTTCGCCGCGAAGAAGTACGGTCTTGCCGTCGTCTCCTCGTCTGCGTTGCGCCGCGTGCTCGCTTCCATCCGGA
AGGTCGGTCAGGACAAGTTCTTTGACGAGAACAAGGTCTTCAGCGCCGCCAGCTCCCTGCCAAAGCCGACCTCCA
AGCCCGACCCCGCTATCTACCTGTATGCTCTCGAGCAGGTCGGCAAGCGTGCTTCCGAGACTGTCGCCATCGAGG
ACAGCAAGTCTGGTGCTCTTTCTGCGGTTCGTGCCGGTATTCCCGTGATTGCGTACGTTGGCAGCTACAATGGCG
AAGATACGCAGAAGGCAATGGCGAAGGCCCTGACTGACATTGGCGCGAAGAGCGTCATGTATCATTGGTCAGAGT
TTGAGAAGTGTATGAAGGAAATCGAGAATGATGTCAGCGTCGATGTCCAGTCGACCCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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