Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3322.t1
Gene name
Locationscaffold_05:343821..344846
Strand+
Gene length (bp)1025
Transcript length (bp)579
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 2.3E-19 11 69

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 41 63 22
3 100 122 22
4 135 157 22
5 164 186 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3322.t1
MSSENNITLASNVLGTIGTVLWCIQLIPQIWYNWRRKNTDGFPAAMMFLWASCSVPMGAYLILQQVNIPLQIQPQ
IFGFFSLVSWSQVLHYNHNYSKTKAVLVCLGTIVLFGGLEALLILTLRIPYNNGVTWPDIVVGVIAAIILIAGLV
PPYFELWKRDGRVIGFNWVFLCIDTLGGLFSLFALGQAWSAS*
Coding >Pro_DTO377G3_2|g3322.t1
ATGTCATCAGAGAATAATATCACACTGGCATCGAACGTCCTCGGCACCATCGGGACGGTTCTCTGGTGCATCCAA
CTCATACCACAGATCTGGTATAATTGGCGCCGTAAGAACACAGATGGATTCCCTGCAGCGATGATGTTTCTGTGG
GCAAGCTGCTCGGTTCCAATGGGCGCATATCTGATTCTGCAGCAAGTCAATATCCCGTTGCAGATTCAGCCTCAG
ATCTTCGGATTCTTTTCGCTGGTTAGTTGGAGTCAAGTTCTTCATTATAACCACAACTATAGCAAAACTAAGGCT
GTTCTGGTATGCTTAGGCACAATTGTTTTATTTGGGGGATTGGAGGCTCTTCTCATCCTAACATTGAGAATACCA
TATAATAACGGGGTAACATGGCCCGACATCGTGGTTGGGGTTATAGCCGCCATTATCCTCATTGCAGGACTAGTG
CCGCCGTATTTTGAATTGTGGAAGAGAGACGGGCGTGTGATTGGCTTCAATTGGGTCTTCCTCTGCATCGACACG
TTGGGTGGGCTGTTTTCTCTCTTCGCATTAGGTCAGGCCTGGTCTGCATCCTAG
Transcript >Pro_DTO377G3_2|g3322.t1
ATGTCATCAGAGAATAATATCACACTGGCATCGAACGTCCTCGGCACCATCGGGACGGTTCTCTGGTGCATCCAA
CTCATACCACAGATCTGGTATAATTGGCGCCGTAAGAACACAGATGGATTCCCTGCAGCGATGATGTTTCTGTGG
GCAAGCTGCTCGGTTCCAATGGGCGCATATCTGATTCTGCAGCAAGTCAATATCCCGTTGCAGATTCAGCCTCAG
ATCTTCGGATTCTTTTCGCTGGTTAGTTGGAGTCAAGTTCTTCATTATAACCACAACTATAGCAAAACTAAGGCT
GTTCTGGTATGCTTAGGCACAATTGTTTTATTTGGGGGATTGGAGGCTCTTCTCATCCTAACATTGAGAATACCA
TATAATAACGGGGTAACATGGCCCGACATCGTGGTTGGGGTTATAGCCGCCATTATCCTCATTGCAGGACTAGTG
CCGCCGTATTTTGAATTGTGGAAGAGAGACGGGCGTGTGATTGGCTTCAATTGGGTCTTCCTCTGCATCGACACG
TTGGGTGGGCTGTTTTCTCTCTTCGCATTAGGTCAGGCCTGGTCTGCATCCTAG
Gene >Pro_DTO377G3_2|g3322.t1
ATGTCATCAGAGAATAATATCACACTGGCATCGAACGTCCTCGGCACCATCGGGACGGTTCTCTGGTGCATCCAA
CTCATACCACAGATCTGGTATAATTGGCGCCGTAAGAACACAGATGGATTCCCTGCAGCGATGATGTTTCTGTGG
GCAAGCTGTAAGTTATTTCCCTGTCCCTTCATCAGGTTTAGGGCCTCGAGGATTATATTTCGAGTCTCTTGATAT
ATGAAGCATGTCACCTAATATAGGAAGGGGAAGGGAGGAAAAAAAAAAGAAACCTTCGAGATCAAAATTGGCTTA
CATTTGTGATTCCTGTAGGCTCGGTTCCAATGGGCGCATATCTGATTCTGCAGGTAAGTTGAATTACCCTAATTG
GCAGACTTCCTGTCTAGTAATTTCGAAATTTTTTTGTATCTGCATCTATCGCTGACGGCTATCTTTATGATTCTT
GCTATAGCAAGTCAATATCCCGTTGCAGATTCAGCCTCAGATCTTCGGATTCTTTTCGCTGGTTAGTTGGAGTCA
AGTTCTTCATTATAACCAGTGAGTTGGTTTCATGTATGGATTTATTGTGATCGAACTGCTAATCTCAGCTCATCA
ATTTTAATAGCAACTATAGCAAAACTAAGGCTGTTCTGGTATGCTTAGGCACAATTGTTTTATTTGGGGGATTGG
AGGCTCTTCTCATCCTAACATTGAGAGTATTATCCATGTTTCTTTCTATTCTTTTTTTCTGATGGAAGATCTAAT
CAAACTTGACAGATACCATATAATAACGGGGTAACATGGCCCGACATCGTGGTTGGGGTTATAGCCGCCATTATC
CTCATTGCAGGACTAGTGCCGCCGTATTTTGAATTGTGGAAGAGAGACGGGCGTGTGATTGGCTTCAGTGGGTTT
TGTTCTGACTTACAGCGCTTGATGGACACCTGCTGATGTTAATAGATTGGGTCTTCCTCTGCATCGACACGTTGG
GTGGGCTGTTTTCTCTCTTCGCATTAGGTCAGGCCTGGTCTGCATCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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