Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g3322.t1
Gene name
Location	scaffold_05:343821..344846
Strand	+
Gene length (bp)	1025
Transcript length (bp)	579
Coding sequence length (bp)	579
Protein length (aa)	193

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	2.2E-19	11	69

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	9	31	22
2	41	63	22
3	100	122	22
4	135	157	22
5	164	186	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3322.t1 MSSENNITLASNVLGTIGTVLWCIQLIPQIWYNWRRKNTDGFPAAMMFLWASCSVPMGAYLILQQVNIPLQIQPQ IFGFFSLVSWSQVLHYNHNYSKTKAVLVCLGTIVLFGGLEALLILTLRIPYNNGVTWPDIVVGVIAAIILIAGLV PPYFELWKRDGRVIGFNWVFLCIDTLGGLFSLFALGQAWSAS*
Coding	>Pro_DTO377G3_2\|g3322.t1 ATGTCATCAGAGAATAATATCACACTGGCATCGAACGTCCTCGGCACCATCGGGACGGTTCTCTGGTGCATCCAA CTCATACCACAGATCTGGTATAATTGGCGCCGTAAGAACACAGATGGATTCCCTGCAGCGATGATGTTTCTGTGG GCAAGCTGCTCGGTTCCAATGGGCGCATATCTGATTCTGCAGCAAGTCAATATCCCGTTGCAGATTCAGCCTCAG ATCTTCGGATTCTTTTCGCTGGTTAGTTGGAGTCAAGTTCTTCATTATAACCACAACTATAGCAAAACTAAGGCT GTTCTGGTATGCTTAGGCACAATTGTTTTATTTGGGGGATTGGAGGCTCTTCTCATCCTAACATTGAGAATACCA TATAATAACGGGGTAACATGGCCCGACATCGTGGTTGGGGTTATAGCCGCCATTATCCTCATTGCAGGACTAGTG CCGCCGTATTTTGAATTGTGGAAGAGAGACGGGCGTGTGATTGGCTTCAATTGGGTCTTCCTCTGCATCGACACG TTGGGTGGGCTGTTTTCTCTCTTCGCATTAGGTCAGGCCTGGTCTGCATCCTAG
Transcript	>Pro_DTO377G3_2\|g3322.t1 ATGTCATCAGAGAATAATATCACACTGGCATCGAACGTCCTCGGCACCATCGGGACGGTTCTCTGGTGCATCCAA CTCATACCACAGATCTGGTATAATTGGCGCCGTAAGAACACAGATGGATTCCCTGCAGCGATGATGTTTCTGTGG GCAAGCTGCTCGGTTCCAATGGGCGCATATCTGATTCTGCAGCAAGTCAATATCCCGTTGCAGATTCAGCCTCAG ATCTTCGGATTCTTTTCGCTGGTTAGTTGGAGTCAAGTTCTTCATTATAACCACAACTATAGCAAAACTAAGGCT GTTCTGGTATGCTTAGGCACAATTGTTTTATTTGGGGGATTGGAGGCTCTTCTCATCCTAACATTGAGAATACCA TATAATAACGGGGTAACATGGCCCGACATCGTGGTTGGGGTTATAGCCGCCATTATCCTCATTGCAGGACTAGTG CCGCCGTATTTTGAATTGTGGAAGAGAGACGGGCGTGTGATTGGCTTCAATTGGGTCTTCCTCTGCATCGACACG TTGGGTGGGCTGTTTTCTCTCTTCGCATTAGGTCAGGCCTGGTCTGCATCCTAG
Gene	>Pro_DTO377G3_2\|g3322.t1 ATGTCATCAGAGAATAATATCACACTGGCATCGAACGTCCTCGGCACCATCGGGACGGTTCTCTGGTGCATCCAA CTCATACCACAGATCTGGTATAATTGGCGCCGTAAGAACACAGATGGATTCCCTGCAGCGATGATGTTTCTGTGG GCAAGCTGTAAGTTATTTCCCTGTCCCTTCATCAGGTTTAGGGCCTCGAGGATTATATTTCGAGTCTCTTGATAT ATGAAGCATGTCACCTAATATAGGAAGGGGAAGGGAGGAAAAAAAAAAGAAACCTTCGAGATCAAAATTGGCTTA CATTTGTGATTCCTGTAGGCTCGGTTCCAATGGGCGCATATCTGATTCTGCAGGTAAGTTGAATTACCCTAATTG GCAGACTTCCTGTCTAGTAATTTCGAAATTTTTTTGTATCTGCATCTATCGCTGACGGCTATCTTTATGATTCTT GCTATAGCAAGTCAATATCCCGTTGCAGATTCAGCCTCAGATCTTCGGATTCTTTTCGCTGGTTAGTTGGAGTCA AGTTCTTCATTATAACCAGTGAGTTGGTTTCATGTATGGATTTATTGTGATCGAACTGCTAATCTCAGCTCATCA ATTTTAATAGCAACTATAGCAAAACTAAGGCTGTTCTGGTATGCTTAGGCACAATTGTTTTATTTGGGGGATTGG AGGCTCTTCTCATCCTAACATTGAGAGTATTATCCATGTTTCTTTCTATTCTTTTTTTCTGATGGAAGATCTAAT CAAACTTGACAGATACCATATAATAACGGGGTAACATGGCCCGACATCGTGGTTGGGGTTATAGCCGCCATTATC CTCATTGCAGGACTAGTGCCGCCGTATTTTGAATTGTGGAAGAGAGACGGGCGTGTGATTGGCTTCAGTGGGTTT TGTTCTGACTTACAGCGCTTGATGGACACCTGCTGATGTTAATAGATTGGGTCTTCCTCTGCATCGACACGTTGG GTGGGCTGTTTTCTCTCTTCGCATTAGGTCAGGCCTGGTCTGCATCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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