Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3320.t1
Gene name
Locationscaffold_05:338216..340160
Strand-
Gene length (bp)1944
Transcript length (bp)1719
Coding sequence length (bp)1719
Protein length (aa) 573

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00501 AMP-binding AMP-binding enzyme 6.4E-93 26 460
PF13193 AMP-binding_C AMP-binding enzyme C-terminal domain 6.9E-12 469 551

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.73 0.01 1.45
5d_25C Five days - 25 degrees Celsius 0.26 0.00 0.66
7d_25C Seven days - 25 degrees Celsius 0.17 0.00 0.44
10d_25C Ten days - 25 degrees Celsius 0.05 0.00 0.17
7d_15C Seven days - 15 degrees Celsius 0.06 0.00 0.20
7d_30C Seven days - 30 degrees Celsius 0.14 0.00 0.39

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.234491 no
3d_25C 7d_25C 0.124909 no
3d_25C 7d_15C 0.196664 no
3d_25C 7d_30C 0.104111 no
3d_25C 10d_25C 0.193405 no
5d_25C 7d_25C 1.000000 no
5d_25C 7d_15C 1.000000 no
5d_25C 7d_30C 1.000000 no
5d_25C 10d_25C 1.000000 no
7d_25C 7d_15C 1.000000 no
7d_25C 7d_30C 1.000000 no
7d_25C 10d_25C 1.000000 no
7d_15C 7d_30C 1.000000 no
7d_15C 10d_25C 1.000000 no
7d_30C 10d_25C 1.000000 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3320.t1
MDSNLALVYGPTEPQLCLKTMGALIEDQAAQFGDRPAVVFPWQSVRLSYRQLADRSKALAGEMLEMGLHHGDCVG
ILAGNCYQYVEVFLAGARIGCPVVVLNNTYTPAELENAVLRSSCKVVFHATSIGSRDLTGHIRILQGTQYPNPAL
PDLRRIISLGLGEFRTGAIEVQLYDTVTSNSPSVSINNATLEHAERQVTPQDVVNLQFTSGTTGSPKAAMLTHTN
LINNAQFVGRAMQLTPEDVICCPPPMFHCFGLVLGFLSSFFYGSSIVFPSDYFDVAKVVDAIIDEDATVLLGVPT
MYVAELEVMAKTGQRPRRLRTGLASGSAVSQNLMNQLREIMGVEKMLIAYGMTETSPVSFITSLDDSDEKGTTTV
GRVIPHTAAKVIDEKGNTLARGQRGELCTSGFVLQKGYWKNEEKTKEVMRRDENGVLWMHTGDEAMIDSDGYAHI
TGRIKDLIIRGGENIFPREIEERLMSHASVSEASVVGIKDERYGEVVGCFLKASVQFQRPSIQELQQFVGERLGR
HKAPKHVFWLGEKGVGDDFPKTGSGKHQKHMMRDIGNRLVGMFKAKL*
Coding >Pro_DTO377G3_2|g3320.t1
ATGGATTCCAACCTCGCACTTGTCTATGGCCCTACAGAGCCCCAGCTATGTCTCAAGACTATGGGCGCTCTCATC
GAGGACCAGGCAGCCCAATTTGGTGACCGTCCTGCCGTTGTCTTTCCATGGCAGTCCGTCCGGCTGTCATATCGC
CAACTGGCGGACCGGAGCAAAGCCCTAGCTGGAGAGATGCTTGAAATGGGACTGCACCATGGGGACTGTGTGGGT
ATTTTGGCAGGCAACTGCTACCAATATGTTGAAGTTTTCCTTGCTGGTGCTCGAATCGGATGTCCTGTTGTTGTG
CTGAACAATACATACACGCCTGCAGAGCTTGAAAATGCCGTCCTAAGGAGTTCTTGCAAGGTTGTCTTCCATGCT
ACCAGCATCGGCTCTCGGGACCTGACAGGTCATATCAGAATACTTCAAGGGACACAATATCCAAATCCAGCACTC
CCCGATCTCCGCCGGATTATCTCACTCGGACTTGGAGAATTCCGCACTGGAGCTATTGAGGTTCAGCTCTATGAC
ACGGTTACTTCGAATAGTCCTTCTGTGTCTATAAACAATGCGACACTCGAGCACGCAGAGAGACAGGTTACTCCC
CAAGATGTGGTTAACTTGCAATTTACTTCTGGAACCACGGGGTCTCCGAAAGCTGCTATGCTCACACATACGAAC
CTCATCAACAATGCACAATTTGTCGGAAGAGCAATGCAACTGACCCCGGAAGATGTGATTTGTTGCCCGCCACCC
ATGTTCCATTGCTTTGGTCTGGTGTTAGGATTTCTTTCATCATTTTTCTACGGAAGTTCAATCGTCTTTCCATCT
GACTATTTTGATGTCGCAAAGGTAGTCGACGCCATCATCGACGAAGACGCCACGGTTCTTCTCGGCGTTCCAACC
ATGTACGTGGCCGAGTTAGAAGTGATGGCAAAGACAGGACAGAGACCCCGGCGACTACGGACAGGACTTGCATCT
GGCTCGGCAGTCTCACAAAATCTCATGAACCAGCTGCGAGAGATTATGGGCGTCGAGAAAATGCTGATTGCATAC
GGAATGACAGAGACCAGTCCTGTTAGCTTTATTACTTCCCTGGACGATAGCGATGAGAAAGGTACAACAACTGTC
GGTCGAGTCATTCCGCATACGGCTGCAAAGGTCATTGATGAAAAGGGCAATACCTTGGCTCGAGGGCAGCGAGGA
GAGCTCTGCACAAGTGGATTTGTGCTACAAAAGGGATACTGGAAGAATGAAGAGAAGACCAAGGAGGTGATGCGA
AGAGACGAAAACGGCGTCTTATGGATGCACACTGGAGACGAAGCTATGATTGATTCGGATGGATATGCCCATATC
ACCGGTCGGATCAAAGATCTTATTATTCGAGGTGGAGAGAATATCTTCCCGCGAGAAATTGAAGAACGATTGATG
TCCCATGCATCAGTTTCCGAGGCTAGTGTAGTCGGTATCAAGGATGAGAGATACGGTGAGGTCGTTGGCTGTTTC
TTGAAGGCATCGGTGCAGTTTCAGAGGCCCAGTATCCAAGAGCTCCAGCAGTTTGTCGGAGAGAGGCTCGGCCGA
CACAAAGCCCCCAAACATGTGTTTTGGCTAGGAGAGAAAGGTGTTGGTGATGACTTCCCGAAGACTGGCAGTGGT
AAGCATCAAAAACACATGATGCGGGACATTGGAAATCGGTTGGTGGGTATGTTCAAGGCGAAACTTTAG
Transcript >Pro_DTO377G3_2|g3320.t1
ATGGATTCCAACCTCGCACTTGTCTATGGCCCTACAGAGCCCCAGCTATGTCTCAAGACTATGGGCGCTCTCATC
GAGGACCAGGCAGCCCAATTTGGTGACCGTCCTGCCGTTGTCTTTCCATGGCAGTCCGTCCGGCTGTCATATCGC
CAACTGGCGGACCGGAGCAAAGCCCTAGCTGGAGAGATGCTTGAAATGGGACTGCACCATGGGGACTGTGTGGGT
ATTTTGGCAGGCAACTGCTACCAATATGTTGAAGTTTTCCTTGCTGGTGCTCGAATCGGATGTCCTGTTGTTGTG
CTGAACAATACATACACGCCTGCAGAGCTTGAAAATGCCGTCCTAAGGAGTTCTTGCAAGGTTGTCTTCCATGCT
ACCAGCATCGGCTCTCGGGACCTGACAGGTCATATCAGAATACTTCAAGGGACACAATATCCAAATCCAGCACTC
CCCGATCTCCGCCGGATTATCTCACTCGGACTTGGAGAATTCCGCACTGGAGCTATTGAGGTTCAGCTCTATGAC
ACGGTTACTTCGAATAGTCCTTCTGTGTCTATAAACAATGCGACACTCGAGCACGCAGAGAGACAGGTTACTCCC
CAAGATGTGGTTAACTTGCAATTTACTTCTGGAACCACGGGGTCTCCGAAAGCTGCTATGCTCACACATACGAAC
CTCATCAACAATGCACAATTTGTCGGAAGAGCAATGCAACTGACCCCGGAAGATGTGATTTGTTGCCCGCCACCC
ATGTTCCATTGCTTTGGTCTGGTGTTAGGATTTCTTTCATCATTTTTCTACGGAAGTTCAATCGTCTTTCCATCT
GACTATTTTGATGTCGCAAAGGTAGTCGACGCCATCATCGACGAAGACGCCACGGTTCTTCTCGGCGTTCCAACC
ATGTACGTGGCCGAGTTAGAAGTGATGGCAAAGACAGGACAGAGACCCCGGCGACTACGGACAGGACTTGCATCT
GGCTCGGCAGTCTCACAAAATCTCATGAACCAGCTGCGAGAGATTATGGGCGTCGAGAAAATGCTGATTGCATAC
GGAATGACAGAGACCAGTCCTGTTAGCTTTATTACTTCCCTGGACGATAGCGATGAGAAAGGTACAACAACTGTC
GGTCGAGTCATTCCGCATACGGCTGCAAAGGTCATTGATGAAAAGGGCAATACCTTGGCTCGAGGGCAGCGAGGA
GAGCTCTGCACAAGTGGATTTGTGCTACAAAAGGGATACTGGAAGAATGAAGAGAAGACCAAGGAGGTGATGCGA
AGAGACGAAAACGGCGTCTTATGGATGCACACTGGAGACGAAGCTATGATTGATTCGGATGGATATGCCCATATC
ACCGGTCGGATCAAAGATCTTATTATTCGAGGTGGAGAGAATATCTTCCCGCGAGAAATTGAAGAACGATTGATG
TCCCATGCATCAGTTTCCGAGGCTAGTGTAGTCGGTATCAAGGATGAGAGATACGGTGAGGTCGTTGGCTGTTTC
TTGAAGGCATCGGTGCAGTTTCAGAGGCCCAGTATCCAAGAGCTCCAGCAGTTTGTCGGAGAGAGGCTCGGCCGA
CACAAAGCCCCCAAACATGTGTTTTGGCTAGGAGAGAAAGGTGTTGGTGATGACTTCCCGAAGACTGGCAGTGGT
AAGCATCAAAAACACATGATGCGGGACATTGGAAATCGGTTGGTGGGTATGTTCAAGGCGAAACTTTAG
Gene >Pro_DTO377G3_2|g3320.t1
ATGGATTCCAACCTCGCACTTGTCTATGGCCCTACAGAGCCCCAGCTATGTCTCAAGACTATGGGCGCTCTCATC
GAGGACCAGGCAGCCCAATTTGGTGACCGTCCTGCCGTTGTCTTTCCATGGCAGTCCGTCCGGCTGTCATATCGC
CAACTGGCGGACCGGAGCAAAGCCCTAGCTGGAGAGATGCTTGAAATGGGACTGCACCATGGGGACTGTGTGGGT
ATTTTGGCAGGCAACTGCTACCAATATGTTGAAGTTTTCCTTGCTGGTGCTCGAATCGGATGTCCTGTTGTTGTG
CTGAACAATACATACACGCCTGCAGAGCTTGAAAATGCCGTCCTAAGGAGTTGTAAGTCTGCTATGAGGGTTTTC
TTTTTAAAAGGGCAACAGCTAATATAGTAACAGCTTGCAAGGTTGTCTTCCATGCTACCAGCATCGGCTCTCGGG
ACCTGACAGGTCATATCAGAATACTTCAAGGGACACAATATCCAAATCCAGCACTCCCCGATCTCCGCCGGATTA
TCTCACTCGGACTTGGAGAATTCCGCACTGGAGCTATTGAGGTTCAGCTCTATGACACGGTTACTTCGAATAGTC
CTTCTGTGTCTATAAACAATGCGACACTCGAGCACGCAGAGAGACAGGTTACTCCCCAAGATGTGGTTAACTTGC
AATTTACTTCTGGTAAGTGACAACGAAAATCCAGATTTCAAACTGAATATTCACATATTTCAAGGAACCACGGGG
TCTCCGAAAGCTGCTATGCTCACACATACGTAAGTCCGTGAAATTGGTAACTACTTGGAGCATGTAAATTAATCT
AACCTATAGGAACCTCATCAACAATGCACAATTTGTCGGAAGAGCAATGCAACTGACCCCGGAAGATGTGATTTG
TTGCCCGCCACCCATGTTCCATTGCTTTGGTCTGGTGTTAGGATTTCTTTCATCATTTTTCTACGGAAGTTCAAT
CGTCTTTCCATCTGACTATTTTGATGTCGCAAAGGTAGTCGACGCCATCATCGACGAAGACGCCACGGTTCTTCT
CGGCGTTCCAACCATGTACGTGGCCGAGTTAGAAGTGATGGCAAAGACAGGACAGAGACCCCGGCGACTACGGAC
AGGACTTGCATCTGGCTCGGCAGTCTCACAAAATCTCATGAACCAGCTGCGAGAGATTATGGGCGTCGAGAAAAT
GCTGATTGCATACGGAATGACAGAGACCAGTCCTGTTAGCTTTATTACTTCCCTGGACGATAGCGATGAGAAAGG
TACAACAACTGTCGGTCGAGTCATTCCGCATACGGCTGCAAAGGTCATTGATGAAAAGGGCAATACCTTGGCTCG
AGGGCAGCGAGGAGAGCTCTGCACAAGTGGATTTGTGCTACAAAAGGGATACTGGAAGAATGAAGAGAAGACCAA
GGAGGTGATGCGAAGAGACGAAAACGGCGTCTTATGGATGCACACTGGAGACGAAGCTATGATTGATTCGGATGG
ATATGCCCATATCACCGGTCGGATCAAAGATCTTATTATTCGAGGTACGTTCAATTCTCTGATACAAATCCCCAA
ACCCGCTCCTACTGATGTTTGCTGCCAACAGGTGGAGAGAATATCTTCCCGCGAGAAATTGAAGAACGATTGATG
TCCCATGCATCAGTTTCCGAGGCTAGTGTAGTCGGTATCAAGGATGAGAGATACGGTGAGGTCGTTGGCTGTTTC
TTGAAGGCATCGGTGCAGTTTCAGAGGCCCAGTATCCAAGAGCTCCAGCAGTTTGTCGGAGAGAGGCTCGGCCGA
CACAAAGCCCCCAAACATGTGTTTTGGCTAGGAGAGAAAGGTGTTGGTGATGACTTCCCGAAGACTGGCAGTGGT
AAGCATCAAAAACACATGATGCGGGACATTGGAAATCGGTTGGTGGGTATGTTCAAGGCGAAACTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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