Protein ID | Pro_DTO377G3_2|g3315.t1 |
Gene name | |
Location | scaffold_05:327751..329208 |
Strand | - |
Gene length (bp) | 1457 |
Transcript length (bp) | 1281 |
Coding sequence length (bp) | 1281 |
Protein length (aa) | 427 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00441 | Acyl-CoA_dh_1 | Acyl-CoA dehydrogenase, C-terminal domain | 2.0E-30 | 259 | 410 |
PF02771 | Acyl-CoA_dh_N | Acyl-CoA dehydrogenase, N-terminal domain | 6.8E-23 | 24 | 149 |
PF02770 | Acyl-CoA_dh_M | Acyl-CoA dehydrogenase, middle domain | 3.0E-23 | 154 | 247 |
PF08028 | Acyl-CoA_dh_2 | Acyl-CoA dehydrogenase, C-terminal domain | 9.3E-05 | 275 | 397 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | Yes |
GO:0050660 | flavin adenine dinucleotide binding | Yes |
GO:1901265 | nucleoside phosphate binding | No |
GO:0016491 | oxidoreductase activity | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0000166 | nucleotide binding | No |
GO:0043168 | anion binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
GO:0036094 | small molecule binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3315.t1 MASFSTIPFADPLWLNRGYSPYYNDSHRRLQKEVREYVDTYIAPFCEEWEKQGVVPQEVHKRHAELGYTAVSSFP LAANYLNGQRLPGDIKPGDWDGFHDIVVIDELARCGYLGIVWALGCGNSIGGPPVINFGNDDQKRRFLPDMLKGN IRFCLGVTEPDAGSDVAGITTTAERNGDVYIVNGAKKWITNGIFADYCTAAVRTGGEGTQGISALIIPLKAPGVT CKKIENSGVHASGSTYIEFDQVEVPVANLLGVENKGFPVIMNNFNHERLWLACTSLRMARICAEDAYQHAIKRET FGKKLIENQLIRAKFSAMARGIDSAYSWMEQLVYISETAKKQGVDASMGGLFANLKVLAGQTLEKVNREAQQVMG GLGYSKNGRGARIEQVSRDVRVMVVGGGSEEILSELALNQEVKSMKKLSKL* |
Coding | >Pro_DTO377G3_2|g3315.t1 ATGGCTTCTTTTTCCACTATCCCCTTCGCCGATCCTCTCTGGCTGAACCGCGGTTACAGTCCGTACTACAATGAC TCGCATCGCCGACTTCAAAAAGAGGTCCGCGAGTATGTCGACACCTACATTGCGCCATTTTGCGAGGAATGGGAA AAGCAAGGCGTTGTACCACAGGAGGTTCATAAGCGTCACGCGGAGCTCGGATACACTGCTGTCAGCTCCTTCCCA CTTGCGGCCAACTATCTCAATGGTCAGCGGCTTCCTGGGGACATCAAGCCCGGAGACTGGGATGGCTTCCACGAC ATTGTCGTCATCGATGAATTAGCGCGCTGTGGATATCTCGGGATTGTCTGGGCATTGGGATGTGGTAACTCCATT GGAGGGCCGCCAGTGATCAACTTTGGCAATGATGATCAAAAGAGGAGATTCCTCCCGGATATGTTGAAAGGAAAC ATCAGATTCTGTTTGGGTGTGACCGAACCTGACGCTGGATCGGACGTCGCTGGAATCACTACCACGGCGGAGAGA AATGGAGATGTTTATATTGTCAATGGAGCGAAGAAATGGATCACGAACGGCATTTTCGCAGACTATTGTACTGCT GCCGTCAGAACAGGAGGGGAGGGAACCCAGGGCATCTCCGCCCTGATAATCCCGCTGAAGGCCCCGGGAGTAACT TGCAAGAAGATTGAAAACTCCGGCGTCCATGCAAGTGGATCAACATACATTGAGTTCGACCAGGTAGAGGTGCCT GTGGCCAATCTGCTCGGTGTGGAGAACAAGGGTTTCCCTGTCATTATGAACAACTTCAACCATGAGCGACTCTGG CTCGCATGCACATCTCTCCGCATGGCGCGAATTTGCGCTGAGGATGCATACCAACACGCCATCAAACGCGAGACA TTCGGGAAGAAGCTAATCGAAAACCAACTGATTCGCGCGAAGTTCAGTGCGATGGCCCGAGGCATTGACTCGGCA TATTCCTGGATGGAACAGCTAGTCTATATTTCCGAAACAGCCAAGAAGCAGGGCGTGGATGCTTCCATGGGAGGT CTCTTCGCAAATCTGAAGGTCTTGGCTGGGCAGACTCTGGAAAAGGTTAACAGGGAGGCCCAGCAAGTGATGGGT GGTCTTGGATATTCGAAAAATGGCCGCGGGGCAAGGATCGAGCAGGTCAGCCGTGATGTGCGGGTGATGGTTGTT GGTGGTGGCAGTGAAGAAATACTTTCAGAATTGGCTCTTAACCAGGAAGTTAAGAGTATGAAGAAGTTGAGTAAA CTCTAG |
Transcript | >Pro_DTO377G3_2|g3315.t1 ATGGCTTCTTTTTCCACTATCCCCTTCGCCGATCCTCTCTGGCTGAACCGCGGTTACAGTCCGTACTACAATGAC TCGCATCGCCGACTTCAAAAAGAGGTCCGCGAGTATGTCGACACCTACATTGCGCCATTTTGCGAGGAATGGGAA AAGCAAGGCGTTGTACCACAGGAGGTTCATAAGCGTCACGCGGAGCTCGGATACACTGCTGTCAGCTCCTTCCCA CTTGCGGCCAACTATCTCAATGGTCAGCGGCTTCCTGGGGACATCAAGCCCGGAGACTGGGATGGCTTCCACGAC ATTGTCGTCATCGATGAATTAGCGCGCTGTGGATATCTCGGGATTGTCTGGGCATTGGGATGTGGTAACTCCATT GGAGGGCCGCCAGTGATCAACTTTGGCAATGATGATCAAAAGAGGAGATTCCTCCCGGATATGTTGAAAGGAAAC ATCAGATTCTGTTTGGGTGTGACCGAACCTGACGCTGGATCGGACGTCGCTGGAATCACTACCACGGCGGAGAGA AATGGAGATGTTTATATTGTCAATGGAGCGAAGAAATGGATCACGAACGGCATTTTCGCAGACTATTGTACTGCT GCCGTCAGAACAGGAGGGGAGGGAACCCAGGGCATCTCCGCCCTGATAATCCCGCTGAAGGCCCCGGGAGTAACT TGCAAGAAGATTGAAAACTCCGGCGTCCATGCAAGTGGATCAACATACATTGAGTTCGACCAGGTAGAGGTGCCT GTGGCCAATCTGCTCGGTGTGGAGAACAAGGGTTTCCCTGTCATTATGAACAACTTCAACCATGAGCGACTCTGG CTCGCATGCACATCTCTCCGCATGGCGCGAATTTGCGCTGAGGATGCATACCAACACGCCATCAAACGCGAGACA TTCGGGAAGAAGCTAATCGAAAACCAACTGATTCGCGCGAAGTTCAGTGCGATGGCCCGAGGCATTGACTCGGCA TATTCCTGGATGGAACAGCTAGTCTATATTTCCGAAACAGCCAAGAAGCAGGGCGTGGATGCTTCCATGGGAGGT CTCTTCGCAAATCTGAAGGTCTTGGCTGGGCAGACTCTGGAAAAGGTTAACAGGGAGGCCCAGCAAGTGATGGGT GGTCTTGGATATTCGAAAAATGGCCGCGGGGCAAGGATCGAGCAGGTCAGCCGTGATGTGCGGGTGATGGTTGTT GGTGGTGGCAGTGAAGAAATACTTTCAGAATTGGCTCTTAACCAGGAAGTTAAGAGTATGAAGAAGTTGAGTAAA CTCTAG |
Gene | >Pro_DTO377G3_2|g3315.t1 ATGGCTTCTTTTTCCACTATCCCCTTCGCCGATCCTCTCTGGCTGAACCGCGGTTACAGTCCGTACTACAATGAC TCGCATCGCCGACTTCAAAAAGAGGTCCGCGAGTATGTCGACACCTACATTGCGCCATTTTGCGAGGAATGGGAA AAGCAAGGCGTTGTACCACAGGAGGTATGTACAAGACTATATCAAGGACAAGGAGATGAATATCCGCTAAAGATT TCCTGAAATAATAGGTTCATAAGCGTCACGCGGAGCTCGGATACACTGCTGTCAGCTCCTTCCCACTTGCGGCCA ACTATCTCAATGGTCAGCGGCTTCCTGGGGACATCAAGCCCGGAGACTGGGATGGCTTCCACGACATTGTCGTCA TCGATGAATTAGCGCGCTGTGGATATCTCGGGATTGTCTGGGCATTGGGATGTGGTAACTCCATTGGAGGGCCGC CAGTGATCAACTTTGGCAATGATGATCAAAAGAGGAGATTCCTCCCGGATATGTTGAAAGGAAACATCAGATTCT GTTTGGGTGTGACCGAACCTGACGGTAGGATTTCTGAAATATCGGATTGAGTACATTGACTAATTAAAAGAACAG CTGGATCGGACGTCGCTGGAATCACTACCACGGCGGAGAGAAATGGAGATGTTTATATTGTCAATGGAGCGAAGA AATGGATCACGAACGGCATTTTCGCAGACTATTGTACTGCTGCCGTCAGAACAGGAGGGGAGGGAACCCAGGGCA TCTCCGCCCTGATAATCCCGCTGAAGGCCCCGGGAGTAACTTGCAAGAAGATTGAAAACTCCGGCGTCCATGCAA GTGGATCAACATACATTGAGTTCGACCAGGTAGAGGTGCCTGTGGCCAATCTGCTCGGTGTGGAGAACAAGGGTT TCCCTGTCATTATGAACAGTATGTTTCCCCTAGATAGCCACGGCTAGACCAAAGCCAGTTGTCCCTAACTCTTGA CAGACTTCAACCATGAGCGACTCTGGCTCGCATGCACATCTCTCCGCATGGCGCGAATTTGCGCTGAGGATGCAT ACCAACACGCCATCAAACGCGAGACATTCGGGAAGAAGCTAATCGAAAACCAACTGATTCGCGCGAAGTTCAGTG CGATGGCCCGAGGCATTGACTCGGCATATTCCTGGATGGAACAGCTAGTCTATATTTCCGAAACAGCCAAGAAGC AGGGCGTGGATGCTTCCATGGGAGGTCTCTTCGCAAATCTGAAGGTCTTGGCTGGGCAGACTCTGGAAAAGGTTA ACAGGGAGGCCCAGCAAGTGATGGGTGGTCTTGGATATTCGAAAAATGGCCGCGGGGCAAGGATCGAGCAGGTCA GCCGTGATGTGCGGGTGATGGTTGTTGGTGGTGGCAGTGAAGAAATACTTTCAGAATTGGCTCTTAACCAGGAAG TTAAGAGTATGAAGAAGTTGAGTAAACTCTAG |