Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3315.t1
Gene name
Locationscaffold_05:327751..329208
Strand-
Gene length (bp)1457
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 1.8E-30 259 410
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 3.0E-22 25 149
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 6.4E-23 154 247

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3315.t1
MASFSTIPFADPLWLNRGYSPYYNDSHRRLQKEVREYVDTYIAPFCEEWEKQGVVPQEVHKRHAELGYTAVSSFP
LAANYLNGQRLPGDIKPGDWDGFHDIVVIDELARCGYLGIVWALGCGNSIGGPPVINFGNDDQKRRFLPDMLKGN
IRFCLGVTEPDAGSDVAGITTTAERNGDVYIVNGAKKWITNGIFADYCTAAVRTGGEGTQGISALIIPLKAPGVT
CKKIENSGVHASGSTYIEFDQVEVPVANLLGVENKGFPVIMNNFNHERLWLACTSLRMARICAEDAYQHAIKRET
FGKKLIENQLIRAKFSAMARGIDSAYSWMEQLVYISETAKKQGVDASMGGLFANLKVLAGQTLEKVNREAQQVMG
GLGYSKNGRGARIEQVSRDVRVMVVGGGSEEILSELALNQEVKSMKKLSKL*
Coding >Pro_DTO377G3_2|g3315.t1
ATGGCTTCTTTTTCCACTATCCCCTTCGCCGATCCTCTCTGGCTGAACCGCGGTTACAGTCCGTACTACAATGAC
TCGCATCGCCGACTTCAAAAAGAGGTCCGCGAGTATGTCGACACCTACATTGCGCCATTTTGCGAGGAATGGGAA
AAGCAAGGCGTTGTACCACAGGAGGTTCATAAGCGTCACGCGGAGCTCGGATACACTGCTGTCAGCTCCTTCCCA
CTTGCGGCCAACTATCTCAATGGTCAGCGGCTTCCTGGGGACATCAAGCCCGGAGACTGGGATGGCTTCCACGAC
ATTGTCGTCATCGATGAATTAGCGCGCTGTGGATATCTCGGGATTGTCTGGGCATTGGGATGTGGTAACTCCATT
GGAGGGCCGCCAGTGATCAACTTTGGCAATGATGATCAAAAGAGGAGATTCCTCCCGGATATGTTGAAAGGAAAC
ATCAGATTCTGTTTGGGTGTGACCGAACCTGACGCTGGATCGGACGTCGCTGGAATCACTACCACGGCGGAGAGA
AATGGAGATGTTTATATTGTCAATGGAGCGAAGAAATGGATCACGAACGGCATTTTCGCAGACTATTGTACTGCT
GCCGTCAGAACAGGAGGGGAGGGAACCCAGGGCATCTCCGCCCTGATAATCCCGCTGAAGGCCCCGGGAGTAACT
TGCAAGAAGATTGAAAACTCCGGCGTCCATGCAAGTGGATCAACATACATTGAGTTCGACCAGGTAGAGGTGCCT
GTGGCCAATCTGCTCGGTGTGGAGAACAAGGGTTTCCCTGTCATTATGAACAACTTCAACCATGAGCGACTCTGG
CTCGCATGCACATCTCTCCGCATGGCGCGAATTTGCGCTGAGGATGCATACCAACACGCCATCAAACGCGAGACA
TTCGGGAAGAAGCTAATCGAAAACCAACTGATTCGCGCGAAGTTCAGTGCGATGGCCCGAGGCATTGACTCGGCA
TATTCCTGGATGGAACAGCTAGTCTATATTTCCGAAACAGCCAAGAAGCAGGGCGTGGATGCTTCCATGGGAGGT
CTCTTCGCAAATCTGAAGGTCTTGGCTGGGCAGACTCTGGAAAAGGTTAACAGGGAGGCCCAGCAAGTGATGGGT
GGTCTTGGATATTCGAAAAATGGCCGCGGGGCAAGGATCGAGCAGGTCAGCCGTGATGTGCGGGTGATGGTTGTT
GGTGGTGGCAGTGAAGAAATACTTTCAGAATTGGCTCTTAACCAGGAAGTTAAGAGTATGAAGAAGTTGAGTAAA
CTCTAG
Transcript >Pro_DTO377G3_2|g3315.t1
ATGGCTTCTTTTTCCACTATCCCCTTCGCCGATCCTCTCTGGCTGAACCGCGGTTACAGTCCGTACTACAATGAC
TCGCATCGCCGACTTCAAAAAGAGGTCCGCGAGTATGTCGACACCTACATTGCGCCATTTTGCGAGGAATGGGAA
AAGCAAGGCGTTGTACCACAGGAGGTTCATAAGCGTCACGCGGAGCTCGGATACACTGCTGTCAGCTCCTTCCCA
CTTGCGGCCAACTATCTCAATGGTCAGCGGCTTCCTGGGGACATCAAGCCCGGAGACTGGGATGGCTTCCACGAC
ATTGTCGTCATCGATGAATTAGCGCGCTGTGGATATCTCGGGATTGTCTGGGCATTGGGATGTGGTAACTCCATT
GGAGGGCCGCCAGTGATCAACTTTGGCAATGATGATCAAAAGAGGAGATTCCTCCCGGATATGTTGAAAGGAAAC
ATCAGATTCTGTTTGGGTGTGACCGAACCTGACGCTGGATCGGACGTCGCTGGAATCACTACCACGGCGGAGAGA
AATGGAGATGTTTATATTGTCAATGGAGCGAAGAAATGGATCACGAACGGCATTTTCGCAGACTATTGTACTGCT
GCCGTCAGAACAGGAGGGGAGGGAACCCAGGGCATCTCCGCCCTGATAATCCCGCTGAAGGCCCCGGGAGTAACT
TGCAAGAAGATTGAAAACTCCGGCGTCCATGCAAGTGGATCAACATACATTGAGTTCGACCAGGTAGAGGTGCCT
GTGGCCAATCTGCTCGGTGTGGAGAACAAGGGTTTCCCTGTCATTATGAACAACTTCAACCATGAGCGACTCTGG
CTCGCATGCACATCTCTCCGCATGGCGCGAATTTGCGCTGAGGATGCATACCAACACGCCATCAAACGCGAGACA
TTCGGGAAGAAGCTAATCGAAAACCAACTGATTCGCGCGAAGTTCAGTGCGATGGCCCGAGGCATTGACTCGGCA
TATTCCTGGATGGAACAGCTAGTCTATATTTCCGAAACAGCCAAGAAGCAGGGCGTGGATGCTTCCATGGGAGGT
CTCTTCGCAAATCTGAAGGTCTTGGCTGGGCAGACTCTGGAAAAGGTTAACAGGGAGGCCCAGCAAGTGATGGGT
GGTCTTGGATATTCGAAAAATGGCCGCGGGGCAAGGATCGAGCAGGTCAGCCGTGATGTGCGGGTGATGGTTGTT
GGTGGTGGCAGTGAAGAAATACTTTCAGAATTGGCTCTTAACCAGGAAGTTAAGAGTATGAAGAAGTTGAGTAAA
CTCTAG
Gene >Pro_DTO377G3_2|g3315.t1
ATGGCTTCTTTTTCCACTATCCCCTTCGCCGATCCTCTCTGGCTGAACCGCGGTTACAGTCCGTACTACAATGAC
TCGCATCGCCGACTTCAAAAAGAGGTCCGCGAGTATGTCGACACCTACATTGCGCCATTTTGCGAGGAATGGGAA
AAGCAAGGCGTTGTACCACAGGAGGTATGTACAAGACTATATCAAGGACAAGGAGATGAATATCCGCTAAAGATT
TCCTGAAATAATAGGTTCATAAGCGTCACGCGGAGCTCGGATACACTGCTGTCAGCTCCTTCCCACTTGCGGCCA
ACTATCTCAATGGTCAGCGGCTTCCTGGGGACATCAAGCCCGGAGACTGGGATGGCTTCCACGACATTGTCGTCA
TCGATGAATTAGCGCGCTGTGGATATCTCGGGATTGTCTGGGCATTGGGATGTGGTAACTCCATTGGAGGGCCGC
CAGTGATCAACTTTGGCAATGATGATCAAAAGAGGAGATTCCTCCCGGATATGTTGAAAGGAAACATCAGATTCT
GTTTGGGTGTGACCGAACCTGACGGTAGGATTTCTGAAATATCGGATTGAGTACATTGACTAATTAAAAGAACAG
CTGGATCGGACGTCGCTGGAATCACTACCACGGCGGAGAGAAATGGAGATGTTTATATTGTCAATGGAGCGAAGA
AATGGATCACGAACGGCATTTTCGCAGACTATTGTACTGCTGCCGTCAGAACAGGAGGGGAGGGAACCCAGGGCA
TCTCCGCCCTGATAATCCCGCTGAAGGCCCCGGGAGTAACTTGCAAGAAGATTGAAAACTCCGGCGTCCATGCAA
GTGGATCAACATACATTGAGTTCGACCAGGTAGAGGTGCCTGTGGCCAATCTGCTCGGTGTGGAGAACAAGGGTT
TCCCTGTCATTATGAACAGTATGTTTCCCCTAGATAGCCACGGCTAGACCAAAGCCAGTTGTCCCTAACTCTTGA
CAGACTTCAACCATGAGCGACTCTGGCTCGCATGCACATCTCTCCGCATGGCGCGAATTTGCGCTGAGGATGCAT
ACCAACACGCCATCAAACGCGAGACATTCGGGAAGAAGCTAATCGAAAACCAACTGATTCGCGCGAAGTTCAGTG
CGATGGCCCGAGGCATTGACTCGGCATATTCCTGGATGGAACAGCTAGTCTATATTTCCGAAACAGCCAAGAAGC
AGGGCGTGGATGCTTCCATGGGAGGTCTCTTCGCAAATCTGAAGGTCTTGGCTGGGCAGACTCTGGAAAAGGTTA
ACAGGGAGGCCCAGCAAGTGATGGGTGGTCTTGGATATTCGAAAAATGGCCGCGGGGCAAGGATCGAGCAGGTCA
GCCGTGATGTGCGGGTGATGGTTGTTGGTGGTGGCAGTGAAGAAATACTTTCAGAATTGGCTCTTAACCAGGAAG
TTAAGAGTATGAAGAAGTTGAGTAAACTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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