Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3314.t1
Gene name
Location	scaffold_05:324894..327367
Strand	+
Gene length (bp)	2473
Transcript length (bp)	2409
Coding sequence length (bp)	2409
Protein length (aa)	803

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02786	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	9.8E-69	152	361
PF00289	Biotin_carb_N	Biotin carboxylase, N-terminal domain	2.0E-41	36	146
PF02785	Biotin_carb_C	Biotin carboxylase C-terminal domain	3.3E-30	377	487
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	2.0E-11	736	801
PF07478	Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	1.3E-09	178	330
PF02222	ATP-grasp	ATP-grasp domain	1.7E-07	177	331
PF02655	ATP-grasp_3	ATP-grasp domain	3.5E-06	150	333

GO

GO Term	Description	Terminal node
GO:0008716	D-alanine-D-alanine ligase activity	Yes
GO:0046872	metal ion binding	Yes
GO:0005524	ATP binding	Yes
GO:0005488	binding	No
GO:0032553	ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0016879	ligase activity, forming carbon-nitrogen bonds	No
GO:0043167	ion binding	No
GO:0016881	acid-amino acid ligase activity	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0030554	adenyl nucleotide binding	No
GO:0000166	nucleotide binding	No
GO:0003824	catalytic activity	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0016874	ligase activity	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:0043169	cation binding	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 33	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3314.t1 MAVTFTQDPKGTDVSVLRKPLFVAEPPLGKDGRPIIRKVLIANRGEIACRIIQTCRKLNITSVAVYVDEDASSLH VRDADEAINIGSIDRSARNPFLDIELLVQTALSTCAQAIHPGYGYLSENADFAQRVHDAGLIFIGPSPSAMSTLG DKRSSKDYLRAHAPEVPLIPGFSGSSQDAEALGRVATEIGFPVMLKASAGGGGKGMRIVREAGQLKVELERAQSE ARRSFGSDDCILEKFIESSKHVEIQIMGDSHGHVVSFLDRDCSVQRRHQKVIEETPCAFLTEATRKKMSETAVRV AKLIGYENAGTVEFVVDIKTNQFYFLEVNARLQVEHPITEEVTGVDLVSLQLFVAAGGSLRSLPTLGNVTQNGHA IECRLCAENPEREFFPEHGKIHLWLPASGPLAPGRDIRYETAIQTGSSVSIYFDSMIAKLVVWAPTRALAIEKMA QVLGQTACVGVKTNQLFMRSCLLNPAFRDPSYTTAFIPSHLNELLQPPSVQGLPEFKTIASILPSLVVRRLPDYA TALSRPKPLRNVRMQFRNQRFDPVNIHCDVTTTVNWPSQTGQEVDSAPENAVMCIWKASPAGVSSGVEDVYLFPI PNGKTTTDEEVSAAAEISAQYNEISQALRTGKATSSPAYQVQVISWVPAHGNPALPDSWLTSTIEISVNGSKLTA HVAIPSTRAHAFAGQVDCGQRIYCHFPSIGTHVEFKRDTLLSFAESNRSAAKANKGSEQKTVAAPMPCKVLSVLK KNGDEVKSGDSVMVIESMKMEVNISVAASGKFQTDWKTGDAVEEGKILCSIV*
Coding	>Pro_DTO377G3_2\|g3314.t1 ATGGCTGTTACTTTCACCCAAGATCCGAAGGGCACTGATGTGTCAGTTCTTCGCAAGCCATTATTTGTCGCAGAG CCACCCTTGGGCAAAGATGGAAGACCTATTATACGAAAAGTCTTGATTGCCAACCGCGGGGAAATCGCCTGTCGC ATTATCCAGACATGCCGGAAATTGAATATCACATCCGTGGCGGTCTATGTCGACGAAGATGCATCTTCCCTCCAT GTCCGTGACGCAGATGAAGCCATCAACATTGGCAGCATTGACCGCAGTGCTCGCAACCCGTTTCTTGACATCGAA CTACTAGTTCAAACAGCTCTTTCAACGTGTGCTCAAGCTATCCACCCGGGATATGGCTATCTCAGCGAAAACGCA GATTTTGCCCAGCGCGTCCATGACGCAGGTCTCATCTTCATCGGCCCCAGCCCCAGCGCCATGTCTACTCTCGGC GACAAACGGTCATCAAAGGATTATCTGCGCGCTCATGCCCCTGAGGTCCCCCTAATCCCTGGATTCTCGGGATCC AGCCAAGATGCCGAGGCTTTGGGTAGAGTGGCTACGGAGATTGGATTCCCGGTCATGCTCAAGGCTTCCGCTGGT GGCGGTGGAAAGGGTATGCGGATTGTCCGCGAGGCGGGACAGCTTAAGGTTGAACTGGAAAGAGCTCAATCCGAG GCTCGTCGGTCATTTGGTTCAGATGATTGTATCTTGGAGAAATTCATTGAGAGCAGCAAACATGTTGAGATTCAG ATCATGGGTGACTCGCATGGACATGTGGTTTCATTTTTGGATAGGGATTGCTCTGTGCAACGAAGGCATCAGAAG GTCATTGAAGAAACCCCGTGTGCTTTCCTCACAGAAGCAACTCGAAAAAAGATGAGTGAAACTGCTGTCCGGGTA GCCAAGCTTATTGGATATGAAAATGCTGGTACGGTGGAGTTTGTGGTCGATATCAAGACGAACCAATTCTACTTC CTAGAAGTCAATGCGCGGCTACAAGTTGAGCATCCGATCACAGAAGAAGTCACAGGGGTTGATCTTGTTTCTTTA CAACTGTTCGTTGCAGCTGGAGGCAGCCTGAGAAGCCTTCCAACACTGGGGAATGTCACCCAGAATGGACATGCA ATCGAGTGCCGGCTGTGTGCTGAGAACCCCGAGAGGGAATTCTTCCCAGAACATGGCAAAATTCACCTCTGGCTA CCAGCAAGTGGGCCTTTAGCCCCGGGCCGCGATATCCGCTATGAAACAGCAATCCAAACGGGATCATCAGTATCT ATCTATTTCGACTCAATGATCGCCAAGCTTGTCGTTTGGGCTCCAACAAGAGCGCTTGCTATTGAGAAAATGGCT CAGGTTCTTGGGCAGACCGCTTGCGTTGGAGTCAAGACAAATCAACTTTTCATGCGATCATGTTTATTGAACCCG GCGTTCCGTGATCCTAGCTATACAACTGCGTTCATTCCATCTCACCTGAATGAGCTTCTTCAGCCTCCTTCGGTC CAGGGACTGCCTGAGTTCAAAACCATCGCCTCAATTCTTCCAAGCTTGGTAGTCCGACGACTTCCAGATTACGCC ACAGCCTTGTCACGACCCAAACCTCTCCGGAATGTCCGCATGCAATTCCGAAACCAAAGGTTCGACCCAGTCAAT ATCCATTGTGATGTTACAACTACGGTCAATTGGCCTAGCCAGACTGGACAGGAGGTTGATTCGGCACCTGAAAAC GCTGTGATGTGCATTTGGAAAGCAAGCCCAGCCGGGGTTTCATCCGGCGTTGAGGATGTATATCTCTTCCCAATC CCCAATGGAAAGACCACCACCGATGAAGAGGTGTCAGCAGCAGCAGAAATCTCCGCTCAATATAATGAAATCAGT CAAGCACTACGCACCGGCAAAGCAACGTCTTCTCCGGCATACCAAGTCCAAGTTATCTCATGGGTCCCTGCACAC GGCAACCCAGCTCTACCCGATTCCTGGCTTACATCCACCATTGAGATTTCAGTGAATGGATCAAAGCTCACTGCT CATGTAGCTATCCCTTCAACACGGGCCCATGCCTTCGCGGGACAGGTCGATTGTGGTCAACGGATTTATTGTCAT TTCCCCTCTATCGGAACTCATGTTGAATTCAAACGCGATACTCTGCTCTCATTTGCGGAGAGTAATCGATCAGCT GCAAAGGCAAATAAGGGTTCAGAGCAAAAGACTGTTGCAGCTCCCATGCCGTGCAAAGTTCTTTCAGTCTTGAAA AAGAATGGAGACGAAGTCAAGTCTGGCGATTCGGTTATGGTTATTGAGAGTATGAAGATGGAAGTCAATATTTCA GTCGCGGCTTCAGGGAAGTTTCAAACAGATTGGAAGACCGGGGATGCGGTGGAGGAAGGAAAGATTCTTTGTTCG ATTGTTTAG
Transcript	>Pro_DTO377G3_2\|g3314.t1 ATGGCTGTTACTTTCACCCAAGATCCGAAGGGCACTGATGTGTCAGTTCTTCGCAAGCCATTATTTGTCGCAGAG CCACCCTTGGGCAAAGATGGAAGACCTATTATACGAAAAGTCTTGATTGCCAACCGCGGGGAAATCGCCTGTCGC ATTATCCAGACATGCCGGAAATTGAATATCACATCCGTGGCGGTCTATGTCGACGAAGATGCATCTTCCCTCCAT GTCCGTGACGCAGATGAAGCCATCAACATTGGCAGCATTGACCGCAGTGCTCGCAACCCGTTTCTTGACATCGAA CTACTAGTTCAAACAGCTCTTTCAACGTGTGCTCAAGCTATCCACCCGGGATATGGCTATCTCAGCGAAAACGCA GATTTTGCCCAGCGCGTCCATGACGCAGGTCTCATCTTCATCGGCCCCAGCCCCAGCGCCATGTCTACTCTCGGC GACAAACGGTCATCAAAGGATTATCTGCGCGCTCATGCCCCTGAGGTCCCCCTAATCCCTGGATTCTCGGGATCC AGCCAAGATGCCGAGGCTTTGGGTAGAGTGGCTACGGAGATTGGATTCCCGGTCATGCTCAAGGCTTCCGCTGGT GGCGGTGGAAAGGGTATGCGGATTGTCCGCGAGGCGGGACAGCTTAAGGTTGAACTGGAAAGAGCTCAATCCGAG GCTCGTCGGTCATTTGGTTCAGATGATTGTATCTTGGAGAAATTCATTGAGAGCAGCAAACATGTTGAGATTCAG ATCATGGGTGACTCGCATGGACATGTGGTTTCATTTTTGGATAGGGATTGCTCTGTGCAACGAAGGCATCAGAAG GTCATTGAAGAAACCCCGTGTGCTTTCCTCACAGAAGCAACTCGAAAAAAGATGAGTGAAACTGCTGTCCGGGTA GCCAAGCTTATTGGATATGAAAATGCTGGTACGGTGGAGTTTGTGGTCGATATCAAGACGAACCAATTCTACTTC CTAGAAGTCAATGCGCGGCTACAAGTTGAGCATCCGATCACAGAAGAAGTCACAGGGGTTGATCTTGTTTCTTTA CAACTGTTCGTTGCAGCTGGAGGCAGCCTGAGAAGCCTTCCAACACTGGGGAATGTCACCCAGAATGGACATGCA ATCGAGTGCCGGCTGTGTGCTGAGAACCCCGAGAGGGAATTCTTCCCAGAACATGGCAAAATTCACCTCTGGCTA CCAGCAAGTGGGCCTTTAGCCCCGGGCCGCGATATCCGCTATGAAACAGCAATCCAAACGGGATCATCAGTATCT ATCTATTTCGACTCAATGATCGCCAAGCTTGTCGTTTGGGCTCCAACAAGAGCGCTTGCTATTGAGAAAATGGCT CAGGTTCTTGGGCAGACCGCTTGCGTTGGAGTCAAGACAAATCAACTTTTCATGCGATCATGTTTATTGAACCCG GCGTTCCGTGATCCTAGCTATACAACTGCGTTCATTCCATCTCACCTGAATGAGCTTCTTCAGCCTCCTTCGGTC CAGGGACTGCCTGAGTTCAAAACCATCGCCTCAATTCTTCCAAGCTTGGTAGTCCGACGACTTCCAGATTACGCC ACAGCCTTGTCACGACCCAAACCTCTCCGGAATGTCCGCATGCAATTCCGAAACCAAAGGTTCGACCCAGTCAAT ATCCATTGTGATGTTACAACTACGGTCAATTGGCCTAGCCAGACTGGACAGGAGGTTGATTCGGCACCTGAAAAC GCTGTGATGTGCATTTGGAAAGCAAGCCCAGCCGGGGTTTCATCCGGCGTTGAGGATGTATATCTCTTCCCAATC CCCAATGGAAAGACCACCACCGATGAAGAGGTGTCAGCAGCAGCAGAAATCTCCGCTCAATATAATGAAATCAGT CAAGCACTACGCACCGGCAAAGCAACGTCTTCTCCGGCATACCAAGTCCAAGTTATCTCATGGGTCCCTGCACAC GGCAACCCAGCTCTACCCGATTCCTGGCTTACATCCACCATTGAGATTTCAGTGAATGGATCAAAGCTCACTGCT CATGTAGCTATCCCTTCAACACGGGCCCATGCCTTCGCGGGACAGGTCGATTGTGGTCAACGGATTTATTGTCAT TTCCCCTCTATCGGAACTCATGTTGAATTCAAACGCGATACTCTGCTCTCATTTGCGGAGAGTAATCGATCAGCT GCAAAGGCAAATAAGGGTTCAGAGCAAAAGACTGTTGCAGCTCCCATGCCGTGCAAAGTTCTTTCAGTCTTGAAA AAGAATGGAGACGAAGTCAAGTCTGGCGATTCGGTTATGGTTATTGAGAGTATGAAGATGGAAGTCAATATTTCA GTCGCGGCTTCAGGGAAGTTTCAAACAGATTGGAAGACCGGGGATGCGGTGGAGGAAGGAAAGATTCTTTGTTCG ATTGTTTAG
Gene	>Pro_DTO377G3_2\|g3314.t1 ATGGCTGTTACTTTCACCCAAGATCCGAAGGGCACTGATGTGTCAGTTCTTCGCAAGCCATTATTTGTCGCAGAG CCACCCTTGGGCAAAGATGGAAGACCTATTATACGAAAAGTCTTGATTGCCAACCGCGGGGAAATCGCCTGTCGC ATTATCCAGACATGCCGGAAATTGAATATCACATCCGTGGCGGTCTATGTCGACGAGTGAGTGCTCAGAAATTGT GCTACCAACATATCATCGAGGACAATCGCTAAAATGAGTACCCAGAGATGCATCTTCCCTCCATGTCCGTGACGC AGATGAAGCCATCAACATTGGCAGCATTGACCGCAGTGCTCGCAACCCGTTTCTTGACATCGAACTACTAGTTCA AACAGCTCTTTCAACGTGTGCTCAAGCTATCCACCCGGGATATGGCTATCTCAGCGAAAACGCAGATTTTGCCCA GCGCGTCCATGACGCAGGTCTCATCTTCATCGGCCCCAGCCCCAGCGCCATGTCTACTCTCGGCGACAAACGGTC ATCAAAGGATTATCTGCGCGCTCATGCCCCTGAGGTCCCCCTAATCCCTGGATTCTCGGGATCCAGCCAAGATGC CGAGGCTTTGGGTAGAGTGGCTACGGAGATTGGATTCCCGGTCATGCTCAAGGCTTCCGCTGGTGGCGGTGGAAA GGGTATGCGGATTGTCCGCGAGGCGGGACAGCTTAAGGTTGAACTGGAAAGAGCTCAATCCGAGGCTCGTCGGTC ATTTGGTTCAGATGATTGTATCTTGGAGAAATTCATTGAGAGCAGCAAACATGTTGAGATTCAGATCATGGGTGA CTCGCATGGACATGTGGTTTCATTTTTGGATAGGGATTGCTCTGTGCAACGAAGGCATCAGAAGGTCATTGAAGA AACCCCGTGTGCTTTCCTCACAGAAGCAACTCGAAAAAAGATGAGTGAAACTGCTGTCCGGGTAGCCAAGCTTAT TGGATATGAAAATGCTGGTACGGTGGAGTTTGTGGTCGATATCAAGACGAACCAATTCTACTTCCTAGAAGTCAA TGCGCGGCTACAAGTTGAGCATCCGATCACAGAAGAAGTCACAGGGGTTGATCTTGTTTCTTTACAACTGTTCGT TGCAGCTGGAGGCAGCCTGAGAAGCCTTCCAACACTGGGGAATGTCACCCAGAATGGACATGCAATCGAGTGCCG GCTGTGTGCTGAGAACCCCGAGAGGGAATTCTTCCCAGAACATGGCAAAATTCACCTCTGGCTACCAGCAAGTGG GCCTTTAGCCCCGGGCCGCGATATCCGCTATGAAACAGCAATCCAAACGGGATCATCAGTATCTATCTATTTCGA CTCAATGATCGCCAAGCTTGTCGTTTGGGCTCCAACAAGAGCGCTTGCTATTGAGAAAATGGCTCAGGTTCTTGG GCAGACCGCTTGCGTTGGAGTCAAGACAAATCAACTTTTCATGCGATCATGTTTATTGAACCCGGCGTTCCGTGA TCCTAGCTATACAACTGCGTTCATTCCATCTCACCTGAATGAGCTTCTTCAGCCTCCTTCGGTCCAGGGACTGCC TGAGTTCAAAACCATCGCCTCAATTCTTCCAAGCTTGGTAGTCCGACGACTTCCAGATTACGCCACAGCCTTGTC ACGACCCAAACCTCTCCGGAATGTCCGCATGCAATTCCGAAACCAAAGGTTCGACCCAGTCAATATCCATTGTGA TGTTACAACTACGGTCAATTGGCCTAGCCAGACTGGACAGGAGGTTGATTCGGCACCTGAAAACGCTGTGATGTG CATTTGGAAAGCAAGCCCAGCCGGGGTTTCATCCGGCGTTGAGGATGTATATCTCTTCCCAATCCCCAATGGAAA GACCACCACCGATGAAGAGGTGTCAGCAGCAGCAGAAATCTCCGCTCAATATAATGAAATCAGTCAAGCACTACG CACCGGCAAAGCAACGTCTTCTCCGGCATACCAAGTCCAAGTTATCTCATGGGTCCCTGCACACGGCAACCCAGC TCTACCCGATTCCTGGCTTACATCCACCATTGAGATTTCAGTGAATGGATCAAAGCTCACTGCTCATGTAGCTAT CCCTTCAACACGGGCCCATGCCTTCGCGGGACAGGTCGATTGTGGTCAACGGATTTATTGTCATTTCCCCTCTAT CGGAACTCATGTTGAATTCAAACGCGATACTCTGCTCTCATTTGCGGAGAGTAATCGATCAGCTGCAAAGGCAAA TAAGGGTTCAGAGCAAAAGACTGTTGCAGCTCCCATGCCGTGCAAAGTTCTTTCAGTCTTGAAAAAGAATGGAGA CGAAGTCAAGTCTGGCGATTCGGTTATGGTTATTGAGAGTATGAAGATGGAAGTCAATATTTCAGTCGCGGCTTC AGGGAAGTTTCAAACAGATTGGAAGACCGGGGATGCGGTGGAGGAAGGAAAGATTCTTTGTTCGATTGTTTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences