Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3314.t1
Gene name
Locationscaffold_05:324894..327367
Strand+
Gene length (bp)2473
Transcript length (bp)2409
Coding sequence length (bp)2409
Protein length (aa) 803

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02786 CPSase_L_D2 Carbamoyl-phosphate synthase L chain, ATP binding domain 9.8E-69 152 361
PF00289 Biotin_carb_N Biotin carboxylase, N-terminal domain 2.0E-41 36 146
PF02785 Biotin_carb_C Biotin carboxylase C-terminal domain 3.3E-30 377 487
PF00364 Biotin_lipoyl Biotin-requiring enzyme 2.0E-11 736 801
PF07478 Dala_Dala_lig_C D-ala D-ala ligase C-terminus 1.3E-09 178 330
PF02222 ATP-grasp ATP-grasp domain 1.7E-07 177 331
PF02655 ATP-grasp_3 ATP-grasp domain 3.5E-06 150 333

GO

GO Term Description Terminal node
GO:0008716 D-alanine-D-alanine ligase activity Yes
GO:0046872 metal ion binding Yes
GO:0005524 ATP binding Yes
GO:0005488 binding No
GO:0032553 ribonucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0016879 ligase activity, forming carbon-nitrogen bonds No
GO:0043167 ion binding No
GO:0016881 acid-amino acid ligase activity No
GO:0017076 purine nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:0000166 nucleotide binding No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No
GO:0003674 molecular_function No
GO:0016874 ligase activity No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0043169 cation binding No
GO:1901363 heterocyclic compound binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup3103
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g3574.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g1135.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g8885.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g5363.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g5957.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g5437.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g8200.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g4408.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g5904.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g1759.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g5136.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g5564.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g2899.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g9858.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g4053.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g5156.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g7964.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g6831.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g8912.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g5457.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g4312.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g4897.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g5116.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g6224.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g7993.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g2910.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g6056.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g3415.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9922.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g3758.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g3135.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g8579.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g6131.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g3314.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3314.t1
MAVTFTQDPKGTDVSVLRKPLFVAEPPLGKDGRPIIRKVLIANRGEIACRIIQTCRKLNITSVAVYVDEDASSLH
VRDADEAINIGSIDRSARNPFLDIELLVQTALSTCAQAIHPGYGYLSENADFAQRVHDAGLIFIGPSPSAMSTLG
DKRSSKDYLRAHAPEVPLIPGFSGSSQDAEALGRVATEIGFPVMLKASAGGGGKGMRIVREAGQLKVELERAQSE
ARRSFGSDDCILEKFIESSKHVEIQIMGDSHGHVVSFLDRDCSVQRRHQKVIEETPCAFLTEATRKKMSETAVRV
AKLIGYENAGTVEFVVDIKTNQFYFLEVNARLQVEHPITEEVTGVDLVSLQLFVAAGGSLRSLPTLGNVTQNGHA
IECRLCAENPEREFFPEHGKIHLWLPASGPLAPGRDIRYETAIQTGSSVSIYFDSMIAKLVVWAPTRALAIEKMA
QVLGQTACVGVKTNQLFMRSCLLNPAFRDPSYTTAFIPSHLNELLQPPSVQGLPEFKTIASILPSLVVRRLPDYA
TALSRPKPLRNVRMQFRNQRFDPVNIHCDVTTTVNWPSQTGQEVDSAPENAVMCIWKASPAGVSSGVEDVYLFPI
PNGKTTTDEEVSAAAEISAQYNEISQALRTGKATSSPAYQVQVISWVPAHGNPALPDSWLTSTIEISVNGSKLTA
HVAIPSTRAHAFAGQVDCGQRIYCHFPSIGTHVEFKRDTLLSFAESNRSAAKANKGSEQKTVAAPMPCKVLSVLK
KNGDEVKSGDSVMVIESMKMEVNISVAASGKFQTDWKTGDAVEEGKILCSIV*
Coding >Pro_DTO377G3_2|g3314.t1
ATGGCTGTTACTTTCACCCAAGATCCGAAGGGCACTGATGTGTCAGTTCTTCGCAAGCCATTATTTGTCGCAGAG
CCACCCTTGGGCAAAGATGGAAGACCTATTATACGAAAAGTCTTGATTGCCAACCGCGGGGAAATCGCCTGTCGC
ATTATCCAGACATGCCGGAAATTGAATATCACATCCGTGGCGGTCTATGTCGACGAAGATGCATCTTCCCTCCAT
GTCCGTGACGCAGATGAAGCCATCAACATTGGCAGCATTGACCGCAGTGCTCGCAACCCGTTTCTTGACATCGAA
CTACTAGTTCAAACAGCTCTTTCAACGTGTGCTCAAGCTATCCACCCGGGATATGGCTATCTCAGCGAAAACGCA
GATTTTGCCCAGCGCGTCCATGACGCAGGTCTCATCTTCATCGGCCCCAGCCCCAGCGCCATGTCTACTCTCGGC
GACAAACGGTCATCAAAGGATTATCTGCGCGCTCATGCCCCTGAGGTCCCCCTAATCCCTGGATTCTCGGGATCC
AGCCAAGATGCCGAGGCTTTGGGTAGAGTGGCTACGGAGATTGGATTCCCGGTCATGCTCAAGGCTTCCGCTGGT
GGCGGTGGAAAGGGTATGCGGATTGTCCGCGAGGCGGGACAGCTTAAGGTTGAACTGGAAAGAGCTCAATCCGAG
GCTCGTCGGTCATTTGGTTCAGATGATTGTATCTTGGAGAAATTCATTGAGAGCAGCAAACATGTTGAGATTCAG
ATCATGGGTGACTCGCATGGACATGTGGTTTCATTTTTGGATAGGGATTGCTCTGTGCAACGAAGGCATCAGAAG
GTCATTGAAGAAACCCCGTGTGCTTTCCTCACAGAAGCAACTCGAAAAAAGATGAGTGAAACTGCTGTCCGGGTA
GCCAAGCTTATTGGATATGAAAATGCTGGTACGGTGGAGTTTGTGGTCGATATCAAGACGAACCAATTCTACTTC
CTAGAAGTCAATGCGCGGCTACAAGTTGAGCATCCGATCACAGAAGAAGTCACAGGGGTTGATCTTGTTTCTTTA
CAACTGTTCGTTGCAGCTGGAGGCAGCCTGAGAAGCCTTCCAACACTGGGGAATGTCACCCAGAATGGACATGCA
ATCGAGTGCCGGCTGTGTGCTGAGAACCCCGAGAGGGAATTCTTCCCAGAACATGGCAAAATTCACCTCTGGCTA
CCAGCAAGTGGGCCTTTAGCCCCGGGCCGCGATATCCGCTATGAAACAGCAATCCAAACGGGATCATCAGTATCT
ATCTATTTCGACTCAATGATCGCCAAGCTTGTCGTTTGGGCTCCAACAAGAGCGCTTGCTATTGAGAAAATGGCT
CAGGTTCTTGGGCAGACCGCTTGCGTTGGAGTCAAGACAAATCAACTTTTCATGCGATCATGTTTATTGAACCCG
GCGTTCCGTGATCCTAGCTATACAACTGCGTTCATTCCATCTCACCTGAATGAGCTTCTTCAGCCTCCTTCGGTC
CAGGGACTGCCTGAGTTCAAAACCATCGCCTCAATTCTTCCAAGCTTGGTAGTCCGACGACTTCCAGATTACGCC
ACAGCCTTGTCACGACCCAAACCTCTCCGGAATGTCCGCATGCAATTCCGAAACCAAAGGTTCGACCCAGTCAAT
ATCCATTGTGATGTTACAACTACGGTCAATTGGCCTAGCCAGACTGGACAGGAGGTTGATTCGGCACCTGAAAAC
GCTGTGATGTGCATTTGGAAAGCAAGCCCAGCCGGGGTTTCATCCGGCGTTGAGGATGTATATCTCTTCCCAATC
CCCAATGGAAAGACCACCACCGATGAAGAGGTGTCAGCAGCAGCAGAAATCTCCGCTCAATATAATGAAATCAGT
CAAGCACTACGCACCGGCAAAGCAACGTCTTCTCCGGCATACCAAGTCCAAGTTATCTCATGGGTCCCTGCACAC
GGCAACCCAGCTCTACCCGATTCCTGGCTTACATCCACCATTGAGATTTCAGTGAATGGATCAAAGCTCACTGCT
CATGTAGCTATCCCTTCAACACGGGCCCATGCCTTCGCGGGACAGGTCGATTGTGGTCAACGGATTTATTGTCAT
TTCCCCTCTATCGGAACTCATGTTGAATTCAAACGCGATACTCTGCTCTCATTTGCGGAGAGTAATCGATCAGCT
GCAAAGGCAAATAAGGGTTCAGAGCAAAAGACTGTTGCAGCTCCCATGCCGTGCAAAGTTCTTTCAGTCTTGAAA
AAGAATGGAGACGAAGTCAAGTCTGGCGATTCGGTTATGGTTATTGAGAGTATGAAGATGGAAGTCAATATTTCA
GTCGCGGCTTCAGGGAAGTTTCAAACAGATTGGAAGACCGGGGATGCGGTGGAGGAAGGAAAGATTCTTTGTTCG
ATTGTTTAG
Transcript >Pro_DTO377G3_2|g3314.t1
ATGGCTGTTACTTTCACCCAAGATCCGAAGGGCACTGATGTGTCAGTTCTTCGCAAGCCATTATTTGTCGCAGAG
CCACCCTTGGGCAAAGATGGAAGACCTATTATACGAAAAGTCTTGATTGCCAACCGCGGGGAAATCGCCTGTCGC
ATTATCCAGACATGCCGGAAATTGAATATCACATCCGTGGCGGTCTATGTCGACGAAGATGCATCTTCCCTCCAT
GTCCGTGACGCAGATGAAGCCATCAACATTGGCAGCATTGACCGCAGTGCTCGCAACCCGTTTCTTGACATCGAA
CTACTAGTTCAAACAGCTCTTTCAACGTGTGCTCAAGCTATCCACCCGGGATATGGCTATCTCAGCGAAAACGCA
GATTTTGCCCAGCGCGTCCATGACGCAGGTCTCATCTTCATCGGCCCCAGCCCCAGCGCCATGTCTACTCTCGGC
GACAAACGGTCATCAAAGGATTATCTGCGCGCTCATGCCCCTGAGGTCCCCCTAATCCCTGGATTCTCGGGATCC
AGCCAAGATGCCGAGGCTTTGGGTAGAGTGGCTACGGAGATTGGATTCCCGGTCATGCTCAAGGCTTCCGCTGGT
GGCGGTGGAAAGGGTATGCGGATTGTCCGCGAGGCGGGACAGCTTAAGGTTGAACTGGAAAGAGCTCAATCCGAG
GCTCGTCGGTCATTTGGTTCAGATGATTGTATCTTGGAGAAATTCATTGAGAGCAGCAAACATGTTGAGATTCAG
ATCATGGGTGACTCGCATGGACATGTGGTTTCATTTTTGGATAGGGATTGCTCTGTGCAACGAAGGCATCAGAAG
GTCATTGAAGAAACCCCGTGTGCTTTCCTCACAGAAGCAACTCGAAAAAAGATGAGTGAAACTGCTGTCCGGGTA
GCCAAGCTTATTGGATATGAAAATGCTGGTACGGTGGAGTTTGTGGTCGATATCAAGACGAACCAATTCTACTTC
CTAGAAGTCAATGCGCGGCTACAAGTTGAGCATCCGATCACAGAAGAAGTCACAGGGGTTGATCTTGTTTCTTTA
CAACTGTTCGTTGCAGCTGGAGGCAGCCTGAGAAGCCTTCCAACACTGGGGAATGTCACCCAGAATGGACATGCA
ATCGAGTGCCGGCTGTGTGCTGAGAACCCCGAGAGGGAATTCTTCCCAGAACATGGCAAAATTCACCTCTGGCTA
CCAGCAAGTGGGCCTTTAGCCCCGGGCCGCGATATCCGCTATGAAACAGCAATCCAAACGGGATCATCAGTATCT
ATCTATTTCGACTCAATGATCGCCAAGCTTGTCGTTTGGGCTCCAACAAGAGCGCTTGCTATTGAGAAAATGGCT
CAGGTTCTTGGGCAGACCGCTTGCGTTGGAGTCAAGACAAATCAACTTTTCATGCGATCATGTTTATTGAACCCG
GCGTTCCGTGATCCTAGCTATACAACTGCGTTCATTCCATCTCACCTGAATGAGCTTCTTCAGCCTCCTTCGGTC
CAGGGACTGCCTGAGTTCAAAACCATCGCCTCAATTCTTCCAAGCTTGGTAGTCCGACGACTTCCAGATTACGCC
ACAGCCTTGTCACGACCCAAACCTCTCCGGAATGTCCGCATGCAATTCCGAAACCAAAGGTTCGACCCAGTCAAT
ATCCATTGTGATGTTACAACTACGGTCAATTGGCCTAGCCAGACTGGACAGGAGGTTGATTCGGCACCTGAAAAC
GCTGTGATGTGCATTTGGAAAGCAAGCCCAGCCGGGGTTTCATCCGGCGTTGAGGATGTATATCTCTTCCCAATC
CCCAATGGAAAGACCACCACCGATGAAGAGGTGTCAGCAGCAGCAGAAATCTCCGCTCAATATAATGAAATCAGT
CAAGCACTACGCACCGGCAAAGCAACGTCTTCTCCGGCATACCAAGTCCAAGTTATCTCATGGGTCCCTGCACAC
GGCAACCCAGCTCTACCCGATTCCTGGCTTACATCCACCATTGAGATTTCAGTGAATGGATCAAAGCTCACTGCT
CATGTAGCTATCCCTTCAACACGGGCCCATGCCTTCGCGGGACAGGTCGATTGTGGTCAACGGATTTATTGTCAT
TTCCCCTCTATCGGAACTCATGTTGAATTCAAACGCGATACTCTGCTCTCATTTGCGGAGAGTAATCGATCAGCT
GCAAAGGCAAATAAGGGTTCAGAGCAAAAGACTGTTGCAGCTCCCATGCCGTGCAAAGTTCTTTCAGTCTTGAAA
AAGAATGGAGACGAAGTCAAGTCTGGCGATTCGGTTATGGTTATTGAGAGTATGAAGATGGAAGTCAATATTTCA
GTCGCGGCTTCAGGGAAGTTTCAAACAGATTGGAAGACCGGGGATGCGGTGGAGGAAGGAAAGATTCTTTGTTCG
ATTGTTTAG
Gene >Pro_DTO377G3_2|g3314.t1
ATGGCTGTTACTTTCACCCAAGATCCGAAGGGCACTGATGTGTCAGTTCTTCGCAAGCCATTATTTGTCGCAGAG
CCACCCTTGGGCAAAGATGGAAGACCTATTATACGAAAAGTCTTGATTGCCAACCGCGGGGAAATCGCCTGTCGC
ATTATCCAGACATGCCGGAAATTGAATATCACATCCGTGGCGGTCTATGTCGACGAGTGAGTGCTCAGAAATTGT
GCTACCAACATATCATCGAGGACAATCGCTAAAATGAGTACCCAGAGATGCATCTTCCCTCCATGTCCGTGACGC
AGATGAAGCCATCAACATTGGCAGCATTGACCGCAGTGCTCGCAACCCGTTTCTTGACATCGAACTACTAGTTCA
AACAGCTCTTTCAACGTGTGCTCAAGCTATCCACCCGGGATATGGCTATCTCAGCGAAAACGCAGATTTTGCCCA
GCGCGTCCATGACGCAGGTCTCATCTTCATCGGCCCCAGCCCCAGCGCCATGTCTACTCTCGGCGACAAACGGTC
ATCAAAGGATTATCTGCGCGCTCATGCCCCTGAGGTCCCCCTAATCCCTGGATTCTCGGGATCCAGCCAAGATGC
CGAGGCTTTGGGTAGAGTGGCTACGGAGATTGGATTCCCGGTCATGCTCAAGGCTTCCGCTGGTGGCGGTGGAAA
GGGTATGCGGATTGTCCGCGAGGCGGGACAGCTTAAGGTTGAACTGGAAAGAGCTCAATCCGAGGCTCGTCGGTC
ATTTGGTTCAGATGATTGTATCTTGGAGAAATTCATTGAGAGCAGCAAACATGTTGAGATTCAGATCATGGGTGA
CTCGCATGGACATGTGGTTTCATTTTTGGATAGGGATTGCTCTGTGCAACGAAGGCATCAGAAGGTCATTGAAGA
AACCCCGTGTGCTTTCCTCACAGAAGCAACTCGAAAAAAGATGAGTGAAACTGCTGTCCGGGTAGCCAAGCTTAT
TGGATATGAAAATGCTGGTACGGTGGAGTTTGTGGTCGATATCAAGACGAACCAATTCTACTTCCTAGAAGTCAA
TGCGCGGCTACAAGTTGAGCATCCGATCACAGAAGAAGTCACAGGGGTTGATCTTGTTTCTTTACAACTGTTCGT
TGCAGCTGGAGGCAGCCTGAGAAGCCTTCCAACACTGGGGAATGTCACCCAGAATGGACATGCAATCGAGTGCCG
GCTGTGTGCTGAGAACCCCGAGAGGGAATTCTTCCCAGAACATGGCAAAATTCACCTCTGGCTACCAGCAAGTGG
GCCTTTAGCCCCGGGCCGCGATATCCGCTATGAAACAGCAATCCAAACGGGATCATCAGTATCTATCTATTTCGA
CTCAATGATCGCCAAGCTTGTCGTTTGGGCTCCAACAAGAGCGCTTGCTATTGAGAAAATGGCTCAGGTTCTTGG
GCAGACCGCTTGCGTTGGAGTCAAGACAAATCAACTTTTCATGCGATCATGTTTATTGAACCCGGCGTTCCGTGA
TCCTAGCTATACAACTGCGTTCATTCCATCTCACCTGAATGAGCTTCTTCAGCCTCCTTCGGTCCAGGGACTGCC
TGAGTTCAAAACCATCGCCTCAATTCTTCCAAGCTTGGTAGTCCGACGACTTCCAGATTACGCCACAGCCTTGTC
ACGACCCAAACCTCTCCGGAATGTCCGCATGCAATTCCGAAACCAAAGGTTCGACCCAGTCAATATCCATTGTGA
TGTTACAACTACGGTCAATTGGCCTAGCCAGACTGGACAGGAGGTTGATTCGGCACCTGAAAACGCTGTGATGTG
CATTTGGAAAGCAAGCCCAGCCGGGGTTTCATCCGGCGTTGAGGATGTATATCTCTTCCCAATCCCCAATGGAAA
GACCACCACCGATGAAGAGGTGTCAGCAGCAGCAGAAATCTCCGCTCAATATAATGAAATCAGTCAAGCACTACG
CACCGGCAAAGCAACGTCTTCTCCGGCATACCAAGTCCAAGTTATCTCATGGGTCCCTGCACACGGCAACCCAGC
TCTACCCGATTCCTGGCTTACATCCACCATTGAGATTTCAGTGAATGGATCAAAGCTCACTGCTCATGTAGCTAT
CCCTTCAACACGGGCCCATGCCTTCGCGGGACAGGTCGATTGTGGTCAACGGATTTATTGTCATTTCCCCTCTAT
CGGAACTCATGTTGAATTCAAACGCGATACTCTGCTCTCATTTGCGGAGAGTAATCGATCAGCTGCAAAGGCAAA
TAAGGGTTCAGAGCAAAAGACTGTTGCAGCTCCCATGCCGTGCAAAGTTCTTTCAGTCTTGAAAAAGAATGGAGA
CGAAGTCAAGTCTGGCGATTCGGTTATGGTTATTGAGAGTATGAAGATGGAAGTCAATATTTCAGTCGCGGCTTC
AGGGAAGTTTCAAACAGATTGGAAGACCGGGGATGCGGTGGAGGAAGGAAAGATTCTTTGTTCGATTGTTTAG

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