Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3312.t1
Gene name
Locationscaffold_05:318715..320277
Strand-
Gene length (bp)1562
Transcript length (bp)1497
Coding sequence length (bp)1497
Protein length (aa) 499

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00970 FAD_binding_6 Oxidoreductase FAD-binding domain 3.7E-32 260 357
PF00175 NAD_binding_1 Oxidoreductase NAD-binding domain 2.1E-26 367 475
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 1.9E-19 20 89

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 60 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 1.72 0.21 3.22
5d_25C Five days - 25 degrees Celsius 0.49 0.00 1.06
7d_25C Seven days - 25 degrees Celsius 0.58 0.00 1.25
10d_25C Ten days - 25 degrees Celsius 0.96 0.02 1.90
7d_15C Seven days - 15 degrees Celsius 0.68 0.00 1.44
7d_30C Seven days - 30 degrees Celsius 0.88 0.00 1.76

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.038776 yes
3d_25C 7d_25C 0.077004 no
3d_25C 7d_15C 0.112992 no
3d_25C 7d_30C 0.249941 no
3d_25C 10d_25C 0.314550 no
5d_25C 7d_25C 1.000000 no
5d_25C 7d_15C 1.000000 no
5d_25C 7d_30C 0.401186 no
5d_25C 10d_25C 0.316485 no
7d_25C 7d_15C 1.000000 no
7d_25C 7d_30C 0.584389 no
7d_25C 10d_25C 0.487907 no
7d_15C 7d_30C 0.750101 no
7d_15C 10d_25C 0.652452 no
7d_30C 10d_25C 0.926584 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3312.t1
MVQSRVTPTPQMELPSIPANEVQLHRKTSDAWMIVHNKVYDVTDYMEDHPGGVEILLGEAGKDATQVFEDVGHSD
EARELLQSLLIGEIPASVGFSIHSSTLWQKVLICLFKERVAEVEIYRPTFEVINQTTAIKTKSQPSNGLASFWWA
VAKVCLIGASGEVARLIYHYRKQWPGFIQASLGGLRVSGTRIWISIGMVSTAQFLLTFGLLSWGVSKLDFKQDML
SFPAYRRRHPNTFFKPSAAPTSFTCQLHPQTWTNLTLREKARISMNVYRFVFNLPNTKQPLGLPSGQHVAVRAKI
GNKDVVRSYTPISDDREIGHVDLLIKVYPTGTMTKYLESLEEGDCVEFRGPKGAMRYTSDYSEKIVMIAGGTGIT
PMYQIIRAICLNPSDATQVNLLYANNSETDMLLREQIDSLASRFPQNFKAHYILVNPPSGWQGSVGFITEDLVKK
SVVASPQSSRVMLCGPPPMLAAVKKMLSALDFHDPKPVSQMQDEVFVF*
Coding >Pro_DTO377G3_2|g3312.t1
ATGGTCCAATCGCGCGTGACACCGACTCCTCAAATGGAGTTGCCCAGCATACCTGCAAACGAAGTCCAGTTGCAT
CGCAAAACGTCTGATGCGTGGATGATTGTGCACAACAAGGTTTACGATGTCACCGACTACATGGAGGATCACCCA
GGAGGTGTTGAAATTCTACTGGGGGAAGCCGGAAAAGATGCTACACAAGTGTTCGAAGATGTTGGCCATTCAGAC
GAAGCTAGAGAGCTCCTACAAAGCTTGTTGATTGGCGAGATCCCGGCATCTGTGGGTTTCTCCATTCATTCATCC
ACATTATGGCAAAAGGTACTGATTTGTCTGTTCAAGGAACGCGTGGCCGAAGTGGAGATCTATCGACCGACTTTC
GAGGTGATCAATCAGACTACAGCCATTAAGACAAAGTCTCAACCAAGCAATGGTTTGGCAAGTTTTTGGTGGGCT
GTCGCTAAAGTCTGTCTGATCGGTGCCTCTGGCGAAGTCGCACGCTTGATTTATCATTATCGCAAGCAATGGCCA
GGATTCATACAAGCTTCGCTGGGAGGCCTGCGCGTATCCGGAACCCGGATTTGGATTTCAATTGGCATGGTGTCC
ACGGCTCAGTTTCTTTTGACCTTCGGACTACTTTCCTGGGGTGTCTCGAAGCTTGATTTCAAGCAGGATATGCTT
TCATTTCCAGCGTACAGACGTCGACACCCAAACACATTCTTTAAACCTTCCGCCGCCCCCACTTCATTTACATGC
CAGCTTCATCCTCAGACTTGGACGAACCTCACACTCCGTGAAAAAGCTAGAATCTCGATGAACGTTTATCGATTT
GTATTCAACCTGCCGAATACAAAACAGCCTCTCGGCTTACCATCCGGACAACACGTTGCAGTCCGTGCAAAAATT
GGAAATAAAGATGTCGTTCGATCGTATACCCCAATCTCAGACGATCGAGAAATTGGCCACGTTGACCTTTTGATC
AAAGTTTATCCTACGGGTACCATGACCAAGTATCTGGAGAGCCTTGAAGAGGGAGACTGTGTTGAATTCCGAGGC
CCAAAAGGCGCCATGCGGTATACCAGCGATTATTCAGAAAAAATTGTAATGATCGCTGGTGGGACTGGAATCACC
CCTATGTATCAAATCATCCGTGCCATCTGCCTAAATCCGTCCGATGCAACTCAGGTCAATCTTCTTTATGCCAAC
AACTCCGAAACCGACATGCTTCTTCGAGAGCAAATTGATTCACTTGCGTCTCGGTTTCCTCAGAATTTCAAGGCT
CACTACATTCTAGTGAACCCGCCTTCTGGGTGGCAGGGTAGTGTCGGTTTCATCACGGAAGATCTGGTCAAGAAG
AGTGTGGTAGCGTCACCTCAAAGCTCTCGCGTAATGCTGTGTGGCCCACCTCCCATGCTCGCTGCGGTGAAGAAA
ATGCTATCTGCCCTTGACTTCCACGACCCCAAGCCTGTGTCTCAGATGCAAGATGAAGTCTTTGTATTTTAG
Transcript >Pro_DTO377G3_2|g3312.t1
ATGGTCCAATCGCGCGTGACACCGACTCCTCAAATGGAGTTGCCCAGCATACCTGCAAACGAAGTCCAGTTGCAT
CGCAAAACGTCTGATGCGTGGATGATTGTGCACAACAAGGTTTACGATGTCACCGACTACATGGAGGATCACCCA
GGAGGTGTTGAAATTCTACTGGGGGAAGCCGGAAAAGATGCTACACAAGTGTTCGAAGATGTTGGCCATTCAGAC
GAAGCTAGAGAGCTCCTACAAAGCTTGTTGATTGGCGAGATCCCGGCATCTGTGGGTTTCTCCATTCATTCATCC
ACATTATGGCAAAAGGTACTGATTTGTCTGTTCAAGGAACGCGTGGCCGAAGTGGAGATCTATCGACCGACTTTC
GAGGTGATCAATCAGACTACAGCCATTAAGACAAAGTCTCAACCAAGCAATGGTTTGGCAAGTTTTTGGTGGGCT
GTCGCTAAAGTCTGTCTGATCGGTGCCTCTGGCGAAGTCGCACGCTTGATTTATCATTATCGCAAGCAATGGCCA
GGATTCATACAAGCTTCGCTGGGAGGCCTGCGCGTATCCGGAACCCGGATTTGGATTTCAATTGGCATGGTGTCC
ACGGCTCAGTTTCTTTTGACCTTCGGACTACTTTCCTGGGGTGTCTCGAAGCTTGATTTCAAGCAGGATATGCTT
TCATTTCCAGCGTACAGACGTCGACACCCAAACACATTCTTTAAACCTTCCGCCGCCCCCACTTCATTTACATGC
CAGCTTCATCCTCAGACTTGGACGAACCTCACACTCCGTGAAAAAGCTAGAATCTCGATGAACGTTTATCGATTT
GTATTCAACCTGCCGAATACAAAACAGCCTCTCGGCTTACCATCCGGACAACACGTTGCAGTCCGTGCAAAAATT
GGAAATAAAGATGTCGTTCGATCGTATACCCCAATCTCAGACGATCGAGAAATTGGCCACGTTGACCTTTTGATC
AAAGTTTATCCTACGGGTACCATGACCAAGTATCTGGAGAGCCTTGAAGAGGGAGACTGTGTTGAATTCCGAGGC
CCAAAAGGCGCCATGCGGTATACCAGCGATTATTCAGAAAAAATTGTAATGATCGCTGGTGGGACTGGAATCACC
CCTATGTATCAAATCATCCGTGCCATCTGCCTAAATCCGTCCGATGCAACTCAGGTCAATCTTCTTTATGCCAAC
AACTCCGAAACCGACATGCTTCTTCGAGAGCAAATTGATTCACTTGCGTCTCGGTTTCCTCAGAATTTCAAGGCT
CACTACATTCTAGTGAACCCGCCTTCTGGGTGGCAGGGTAGTGTCGGTTTCATCACGGAAGATCTGGTCAAGAAG
AGTGTGGTAGCGTCACCTCAAAGCTCTCGCGTAATGCTGTGTGGCCCACCTCCCATGCTCGCTGCGGTGAAGAAA
ATGCTATCTGCCCTTGACTTCCACGACCCCAAGCCTGTGTCTCAGATGCAAGATGAAGTCTTTGTATTTTAG
Gene >Pro_DTO377G3_2|g3312.t1
ATGGTCCAATCGCGCGTGACACCGACTCCTCAAATGGAGTTGCCCAGCATACCTGCAAACGAAGTCCAGTTGCAT
CGCAAAACGTCTGATGCGTGGATGATTGTGCACAACAAGGGTTAGTCTCCGGGTAGTTGTTGAATATATTGGTGA
ATTGTTATCACAGGACTGACGTAAGATTAGTTTACGATGTCACCGACTACATGGAGGATCACCCAGGAGGTGTTG
AAATTCTACTGGGGGAAGCCGGAAAAGATGCTACACAAGTGTTCGAAGATGTTGGCCATTCAGACGAAGCTAGAG
AGCTCCTACAAAGCTTGTTGATTGGCGAGATCCCGGCATCTGTGGGTTTCTCCATTCATTCATCCACATTATGGC
AAAAGGTACTGATTTGTCTGTTCAAGGAACGCGTGGCCGAAGTGGAGATCTATCGACCGACTTTCGAGGTGATCA
ATCAGACTACAGCCATTAAGACAAAGTCTCAACCAAGCAATGGTTTGGCAAGTTTTTGGTGGGCTGTCGCTAAAG
TCTGTCTGATCGGTGCCTCTGGCGAAGTCGCACGCTTGATTTATCATTATCGCAAGCAATGGCCAGGATTCATAC
AAGCTTCGCTGGGAGGCCTGCGCGTATCCGGAACCCGGATTTGGATTTCAATTGGCATGGTGTCCACGGCTCAGT
TTCTTTTGACCTTCGGACTACTTTCCTGGGGTGTCTCGAAGCTTGATTTCAAGCAGGATATGCTTTCATTTCCAG
CGTACAGACGTCGACACCCAAACACATTCTTTAAACCTTCCGCCGCCCCCACTTCATTTACATGCCAGCTTCATC
CTCAGACTTGGACGAACCTCACACTCCGTGAAAAAGCTAGAATCTCGATGAACGTTTATCGATTTGTATTCAACC
TGCCGAATACAAAACAGCCTCTCGGCTTACCATCCGGACAACACGTTGCAGTCCGTGCAAAAATTGGAAATAAAG
ATGTCGTTCGATCGTATACCCCAATCTCAGACGATCGAGAAATTGGCCACGTTGACCTTTTGATCAAAGTTTATC
CTACGGGTACCATGACCAAGTATCTGGAGAGCCTTGAAGAGGGAGACTGTGTTGAATTCCGAGGCCCAAAAGGCG
CCATGCGGTATACCAGCGATTATTCAGAAAAAATTGTAATGATCGCTGGTGGGACTGGAATCACCCCTATGTATC
AAATCATCCGTGCCATCTGCCTAAATCCGTCCGATGCAACTCAGGTCAATCTTCTTTATGCCAACAACTCCGAAA
CCGACATGCTTCTTCGAGAGCAAATTGATTCACTTGCGTCTCGGTTTCCTCAGAATTTCAAGGCTCACTACATTC
TAGTGAACCCGCCTTCTGGGTGGCAGGGTAGTGTCGGTTTCATCACGGAAGATCTGGTCAAGAAGAGTGTGGTAG
CGTCACCTCAAAGCTCTCGCGTAATGCTGTGTGGCCCACCTCCCATGCTCGCTGCGGTGAAGAAAATGCTATCTG
CCCTTGACTTCCACGACCCCAAGCCTGTGTCTCAGATGCAAGATGAAGTCTTTGTATTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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