Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3308.t1
Gene name
Location	scaffold_05:308915..311358
Strand	+
Gene length (bp)	2443
Transcript length (bp)	2187
Coding sequence length (bp)	2187
Protein length (aa)	729

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04082	Fungal_trans	Fungal specific transcription factor domain	4.1E-18	292	537
PF00096	zf-C2H2	Zinc finger, C2H2 type	2.9E-05	20	40
PF00096	zf-C2H2	Zinc finger, C2H2 type	1.2E-03	46	69
PF13894	zf-C2H2_4	C2H2-type zinc finger	3.2E-04	20	40

GO

GO Term	Description	Terminal node
GO:0008270	zinc ion binding	Yes
GO:0006351	transcription, DNA-templated	Yes
GO:0003677	DNA binding	Yes
GO:0006725	cellular aromatic compound metabolic process	No
GO:0046914	transition metal ion binding	No
GO:0005488	binding	No
GO:0008152	metabolic process	No
GO:0019438	aromatic compound biosynthetic process	No
GO:0003676	nucleic acid binding	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0008150	biological_process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0034654	nucleobase-containing compound biosynthetic process	No
GO:0043167	ion binding	No
GO:0032774	RNA biosynthetic process	No
GO:0046872	metal ion binding	No
GO:0016070	RNA metabolic process	No
GO:0044271	cellular nitrogen compound biosynthetic process	No
GO:0043170	macromolecule metabolic process	No
GO:0018130	heterocycle biosynthetic process	No
GO:1901576	organic substance biosynthetic process	No
GO:0009059	macromolecule biosynthetic process	No
GO:0009987	cellular process	No
GO:0044237	cellular metabolic process	No
GO:0090304	nucleic acid metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0097659	nucleic acid-templated transcription	No
GO:0043169	cation binding	No
GO:0044238	primary metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0044249	cellular biosynthetic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0003674	molecular_function	No
GO:0046483	heterocycle metabolic process	No
GO:0009058	biosynthetic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 15	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
C2H2 zinc finger
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	7.57	3.34	11.80
5d_25C	Five days - 25 degrees Celsius	7.87	3.52	12.21
7d_25C	Seven days - 25 degrees Celsius	10.09	4.82	15.35
10d_25C	Ten days - 25 degrees Celsius	8.17	3.60	12.74
7d_15C	Seven days - 15 degrees Celsius	4.53	1.60	7.46
7d_30C	Seven days - 30 degrees Celsius	10.68	5.15	16.21

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.936390	no
3d_25C	7d_25C	0.393680	no
3d_25C	7d_15C	0.139850	no
3d_25C	7d_30C	0.281659	no
3d_25C	10d_25C	0.866215	no
5d_25C	7d_25C	0.478328	no
5d_25C	7d_15C	0.110165	no
5d_25C	7d_30C	0.358102	no
5d_25C	10d_25C	0.938033	no
7d_25C	7d_15C	0.010411	yes
7d_25C	7d_30C	0.898521	no
7d_25C	10d_25C	0.565854	no
7d_15C	7d_30C	0.007091	yes
7d_15C	10d_25C	0.087584	no
7d_30C	10d_25C	0.445392	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3308.t1 MPGQKDPKRIKKGRAKPPLCPYCQRSFSRAEHLQRHVRSHTNDKPFSCDICSKSFGRNDLMIRHKRLVHPPPPLL VHGQNEGLADRRQTPLDVMPIPAEHSIAAIHSQNMLPWVEQSLQIRERDWEHPTEANSNVQRLDSFDEESIPCPI MKPIEDPMQNFADFIESIGFSEGWAPDGLQSIDQFILPFDPVAALQTEFRNDTTTTDDVEDHSSHGHVPEENFLS NFGSRLPSLQPESGEQEDRSQRSGGAIGIQLTRNIREADYRSFLKGLNYFQCVLPGDFSAPSKFKLSRFFHGFID GLNEHLPFIHTPTLRIGSCNPALVLAIAACGAQYRFEGEEGLTLFCAAQAIILEILRQRSYGTSPNLLSSSLLST CRGVAGFWSHSPDRSEQESAELMEAMQAILLLVIHATWGGDARAAQESMTLQGNLASLVRVHGLGEKPAFEITDR TNDVDWCRWAKEESNRRTKFVVFCFLNLHSLMHNTPPLILNSDLGLNMPCSAEVWTAQSASAWGLVYEKAQNRKH SCFQESISLLFKAKESSAGGEMACTAFGNHILLHALSQQLFFARQLCRLPLEQGTHRHHITGMDAVLRTWKSYWK QTPESSTDPRNPSGPIAFTSAALLGQIYVRLQIDLGPHRALVTRDPSAIAQALAGAPNDVVRGPGFITALLHAVH ALSIPIQLGIGFVARTYSFHWSVQHCLSALEYAHLLTTWLRSLPNMGLKIDWN*
Coding	>Pro_DTO377G3_2\|g3308.t1 ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCACACCAATGACAAGCCGTTCTCATGTGACATA TGTTCGAAATCGTTTGGCAGAAATGACCTGATGATCCGCCATAAAAGACTTGTACACCCACCACCACCTCTTCTT GTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACCCCACTTGATGTTATGCCAATTCCAGCTGAGCAC TCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTGGAGCAATCACTCCAAATACGTGAAAGGGATTGG GAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGATTCTTTTGATGAGGAGTCGATACCTTGTCCAATA ATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGCTTTTCAGAAGGGTGGGCA CCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCGTTACAAACGGAATTTCGA AATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCCGAAGAGAACTTCTTATCT AATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGATCCCAAAGGTCAGGTGGG GCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTAAAAGGGCTGAACTATTTC CAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTTTTTCATGGTTTTATCGAT GGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGCAATCCAGCGCTTGTGCTT GCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTGTTTTGTGCAGCACAAGCA ATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCGAGCTCGTTGCTTTCCACT TGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCTGCCGAGCTGATGGAGGCT ATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCGGCACAAGAATCGATGACT CTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCCTTCGAAATCACCGATCGC ACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAATTCGTCGTTTTCTGTTTT CTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTGGGGCTCAATATGCCCTGC TCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAGGCCCAAAACAGAAAGCAT TCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGTGGTGAAATGGCTTGCACT GCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGTCAGTTATGTCGGCTTCCA CTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACATGGAAGTCCTATTGGAAG CAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACTTCAGCGGCACTTCTGGGA CAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGGGATCCTTCAGCAATCGCA CAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCACTTCTCCATGCAGTTCAT GCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTTCACTGGAGCGTACAGCAC TGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCTAATATGGGACTGAAAATC GACTGGAATTGA
Transcript	>Pro_DTO377G3_2\|g3308.t1 ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCACACCAATGACAAGCCGTTCTCATGTGACATA TGTTCGAAATCGTTTGGCAGAAATGACCTGATGATCCGCCATAAAAGACTTGTACACCCACCACCACCTCTTCTT GTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACCCCACTTGATGTTATGCCAATTCCAGCTGAGCAC TCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTGGAGCAATCACTCCAAATACGTGAAAGGGATTGG GAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGATTCTTTTGATGAGGAGTCGATACCTTGTCCAATA ATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGCTTTTCAGAAGGGTGGGCA CCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCGTTACAAACGGAATTTCGA AATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCCGAAGAGAACTTCTTATCT AATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGATCCCAAAGGTCAGGTGGG GCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTAAAAGGGCTGAACTATTTC CAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTTTTTCATGGTTTTATCGAT GGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGCAATCCAGCGCTTGTGCTT GCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTGTTTTGTGCAGCACAAGCA ATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCGAGCTCGTTGCTTTCCACT TGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCTGCCGAGCTGATGGAGGCT ATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCGGCACAAGAATCGATGACT CTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCCTTCGAAATCACCGATCGC ACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAATTCGTCGTTTTCTGTTTT CTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTGGGGCTCAATATGCCCTGC TCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAGGCCCAAAACAGAAAGCAT TCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGTGGTGAAATGGCTTGCACT GCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGTCAGTTATGTCGGCTTCCA CTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACATGGAAGTCCTATTGGAAG CAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACTTCAGCGGCACTTCTGGGA CAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGGGATCCTTCAGCAATCGCA CAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCACTTCTCCATGCAGTTCAT GCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTTCACTGGAGCGTACAGCAC TGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCTAATATGGGACTGAAAATC GACTGGAATTGA
Gene	>Pro_DTO377G3_2\|g3308.t1 ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCGTATGCCGTTCACTTCGCCAACACAGGTTGAA TCATTGCTGACACTCACACCACAGACACCAATGACAAGCCGTTCTCATGTGACATATGTTCGAAATCGTTTGGCA GAAAGTTCGTTCAATTAAGCCTATTGCCCTTCCAAGCAGGTTCTAATTGTGTTTAGTGACCTGATGATCCGCCAT AAAAGACTTGTACACCCACCACCACCTCTTCTTGTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACC CCACTTGATGTTATGCCAATTCCAGCTGAGCACTCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTG GAGCAATCACTCCAAATACGTGAAAGGGATTGGGAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGAT TCTTTTGATGAGGTCAGGCTCTGAAAATATATCAGAAGAGTGACAAAACATGCTGATTATGAGTATGTCTAGGAG TCGATACCTTGTCCAATAATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGC TTTTCAGAAGGGTGGGCACCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCG TTACAAACGGAATTTCGAAATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCC GAAGAGAACTTCTTATCTAATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGA TCCCAAAGGTCAGGTGGGGCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTA AAAGGGCTGAACTATTTCCAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTT TTTCATGGTTTTATCGATGGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGC AATCCAGCGCTTGTGCTTGCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTG TTTTGTGCAGCACAAGCAATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCG AGCTCGTTGCTTTCCACTTGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCT GCCGAGCTGATGGAGGCTATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCG GCACAAGAATCGATGACTCTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCC TTCGAAATCACCGATCGCACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAA TTCGTCGTTTTCTGTTTTCTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTG GGGCTCAATATGCCCTGCTCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAG GCCCAAAACAGAAAGCATTCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGT GGTGAAATGGCTTGCACTGCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGT CAGTTATGTCGGCTTCCACTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACA TGGAAGTCCTATTGGAAGCAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACT TCAGCGGCACTTCTGGGACAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGG GATCCTTCAGCAATCGCACAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCA CTTCTCCATGCAGTTCATGCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTT CACTGGAGCGTACAGCACTGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCT AATATGGGACTGGTAAGATTGCCAAGTCACGAGAGAAAGCTGTATCTATGGATCACACGATTGCTTGATGAGACT GACCTGGGAATCAAACTCCCTATAGAAAATCGACTGGAATTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences