Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3308.t1
Gene name
Locationscaffold_05:308915..311358
Strand+
Gene length (bp)2443
Transcript length (bp)2187
Coding sequence length (bp)2187
Protein length (aa) 729

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 4.1E-18 292 537
PF00096 zf-C2H2 Zinc finger, C2H2 type 2.9E-05 20 40
PF00096 zf-C2H2 Zinc finger, C2H2 type 1.2E-03 46 69
PF13894 zf-C2H2_4 C2H2-type zinc finger 3.2E-04 20 40

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003677 DNA binding Yes
GO:0006725 cellular aromatic compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0005488 binding No
GO:0008152 metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0003676 nucleic acid binding No
GO:0071704 organic substance metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043167 ion binding No
GO:0032774 RNA biosynthetic process No
GO:0046872 metal ion binding No
GO:0016070 RNA metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0043170 macromolecule metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0009987 cellular process No
GO:0044237 cellular metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0097659 nucleic acid-templated transcription No
GO:0043169 cation binding No
GO:0044238 primary metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0003674 molecular_function No
GO:0046483 heterocycle metabolic process No
GO:0009058 biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3308.t1
MPGQKDPKRIKKGRAKPPLCPYCQRSFSRAEHLQRHVRSHTNDKPFSCDICSKSFGRNDLMIRHKRLVHPPPPLL
VHGQNEGLADRRQTPLDVMPIPAEHSIAAIHSQNMLPWVEQSLQIRERDWEHPTEANSNVQRLDSFDEESIPCPI
MKPIEDPMQNFADFIESIGFSEGWAPDGLQSIDQFILPFDPVAALQTEFRNDTTTTDDVEDHSSHGHVPEENFLS
NFGSRLPSLQPESGEQEDRSQRSGGAIGIQLTRNIREADYRSFLKGLNYFQCVLPGDFSAPSKFKLSRFFHGFID
GLNEHLPFIHTPTLRIGSCNPALVLAIAACGAQYRFEGEEGLTLFCAAQAIILEILRQRSYGTSPNLLSSSLLST
CRGVAGFWSHSPDRSEQESAELMEAMQAILLLVIHATWGGDARAAQESMTLQGNLASLVRVHGLGEKPAFEITDR
TNDVDWCRWAKEESNRRTKFVVFCFLNLHSLMHNTPPLILNSDLGLNMPCSAEVWTAQSASAWGLVYEKAQNRKH
SCFQESISLLFKAKESSAGGEMACTAFGNHILLHALSQQLFFARQLCRLPLEQGTHRHHITGMDAVLRTWKSYWK
QTPESSTDPRNPSGPIAFTSAALLGQIYVRLQIDLGPHRALVTRDPSAIAQALAGAPNDVVRGPGFITALLHAVH
ALSIPIQLGIGFVARTYSFHWSVQHCLSALEYAHLLTTWLRSLPNMGLKIDWN*
Coding >Pro_DTO377G3_2|g3308.t1
ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT
TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCACACCAATGACAAGCCGTTCTCATGTGACATA
TGTTCGAAATCGTTTGGCAGAAATGACCTGATGATCCGCCATAAAAGACTTGTACACCCACCACCACCTCTTCTT
GTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACCCCACTTGATGTTATGCCAATTCCAGCTGAGCAC
TCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTGGAGCAATCACTCCAAATACGTGAAAGGGATTGG
GAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGATTCTTTTGATGAGGAGTCGATACCTTGTCCAATA
ATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGCTTTTCAGAAGGGTGGGCA
CCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCGTTACAAACGGAATTTCGA
AATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCCGAAGAGAACTTCTTATCT
AATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGATCCCAAAGGTCAGGTGGG
GCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTAAAAGGGCTGAACTATTTC
CAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTTTTTCATGGTTTTATCGAT
GGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGCAATCCAGCGCTTGTGCTT
GCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTGTTTTGTGCAGCACAAGCA
ATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCGAGCTCGTTGCTTTCCACT
TGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCTGCCGAGCTGATGGAGGCT
ATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCGGCACAAGAATCGATGACT
CTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCCTTCGAAATCACCGATCGC
ACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAATTCGTCGTTTTCTGTTTT
CTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTGGGGCTCAATATGCCCTGC
TCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAGGCCCAAAACAGAAAGCAT
TCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGTGGTGAAATGGCTTGCACT
GCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGTCAGTTATGTCGGCTTCCA
CTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACATGGAAGTCCTATTGGAAG
CAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACTTCAGCGGCACTTCTGGGA
CAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGGGATCCTTCAGCAATCGCA
CAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCACTTCTCCATGCAGTTCAT
GCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTTCACTGGAGCGTACAGCAC
TGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCTAATATGGGACTGAAAATC
GACTGGAATTGA
Transcript >Pro_DTO377G3_2|g3308.t1
ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT
TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCACACCAATGACAAGCCGTTCTCATGTGACATA
TGTTCGAAATCGTTTGGCAGAAATGACCTGATGATCCGCCATAAAAGACTTGTACACCCACCACCACCTCTTCTT
GTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACCCCACTTGATGTTATGCCAATTCCAGCTGAGCAC
TCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTGGAGCAATCACTCCAAATACGTGAAAGGGATTGG
GAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGATTCTTTTGATGAGGAGTCGATACCTTGTCCAATA
ATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGCTTTTCAGAAGGGTGGGCA
CCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCGTTACAAACGGAATTTCGA
AATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCCGAAGAGAACTTCTTATCT
AATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGATCCCAAAGGTCAGGTGGG
GCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTAAAAGGGCTGAACTATTTC
CAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTTTTTCATGGTTTTATCGAT
GGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGCAATCCAGCGCTTGTGCTT
GCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTGTTTTGTGCAGCACAAGCA
ATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCGAGCTCGTTGCTTTCCACT
TGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCTGCCGAGCTGATGGAGGCT
ATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCGGCACAAGAATCGATGACT
CTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCCTTCGAAATCACCGATCGC
ACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAATTCGTCGTTTTCTGTTTT
CTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTGGGGCTCAATATGCCCTGC
TCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAGGCCCAAAACAGAAAGCAT
TCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGTGGTGAAATGGCTTGCACT
GCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGTCAGTTATGTCGGCTTCCA
CTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACATGGAAGTCCTATTGGAAG
CAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACTTCAGCGGCACTTCTGGGA
CAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGGGATCCTTCAGCAATCGCA
CAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCACTTCTCCATGCAGTTCAT
GCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTTCACTGGAGCGTACAGCAC
TGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCTAATATGGGACTGAAAATC
GACTGGAATTGA
Gene >Pro_DTO377G3_2|g3308.t1
ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT
TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCGTATGCCGTTCACTTCGCCAACACAGGTTGAA
TCATTGCTGACACTCACACCACAGACACCAATGACAAGCCGTTCTCATGTGACATATGTTCGAAATCGTTTGGCA
GAAAGTTCGTTCAATTAAGCCTATTGCCCTTCCAAGCAGGTTCTAATTGTGTTTAGTGACCTGATGATCCGCCAT
AAAAGACTTGTACACCCACCACCACCTCTTCTTGTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACC
CCACTTGATGTTATGCCAATTCCAGCTGAGCACTCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTG
GAGCAATCACTCCAAATACGTGAAAGGGATTGGGAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGAT
TCTTTTGATGAGGTCAGGCTCTGAAAATATATCAGAAGAGTGACAAAACATGCTGATTATGAGTATGTCTAGGAG
TCGATACCTTGTCCAATAATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGC
TTTTCAGAAGGGTGGGCACCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCG
TTACAAACGGAATTTCGAAATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCC
GAAGAGAACTTCTTATCTAATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGA
TCCCAAAGGTCAGGTGGGGCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTA
AAAGGGCTGAACTATTTCCAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTT
TTTCATGGTTTTATCGATGGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGC
AATCCAGCGCTTGTGCTTGCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTG
TTTTGTGCAGCACAAGCAATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCG
AGCTCGTTGCTTTCCACTTGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCT
GCCGAGCTGATGGAGGCTATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCG
GCACAAGAATCGATGACTCTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCC
TTCGAAATCACCGATCGCACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAA
TTCGTCGTTTTCTGTTTTCTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTG
GGGCTCAATATGCCCTGCTCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAG
GCCCAAAACAGAAAGCATTCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGT
GGTGAAATGGCTTGCACTGCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGT
CAGTTATGTCGGCTTCCACTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACA
TGGAAGTCCTATTGGAAGCAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACT
TCAGCGGCACTTCTGGGACAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGG
GATCCTTCAGCAATCGCACAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCA
CTTCTCCATGCAGTTCATGCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTT
CACTGGAGCGTACAGCACTGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCT
AATATGGGACTGGTAAGATTGCCAAGTCACGAGAGAAAGCTGTATCTATGGATCACACGATTGCTTGATGAGACT
GACCTGGGAATCAAACTCCCTATAGAAAATCGACTGGAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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