Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3308.t1
Gene name
Locationscaffold_05:308915..311358
Strand+
Gene length (bp)2443
Transcript length (bp)2187
Coding sequence length (bp)2187
Protein length (aa) 729

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 3.7E-18 292 537
PF00096 zf-C2H2 Zinc finger, C2H2 type 2.6E-05 20 40
PF00096 zf-C2H2 Zinc finger, C2H2 type 1.1E-03 46 69
PF13894 zf-C2H2_4 C2H2-type zinc finger 2.7E-04 20 40

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0003676 nucleic acid binding Yes
GO:0005634 nucleus Yes
GO:0003677 DNA binding Yes
GO:0071704 organic substance metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0046872 metal ion binding No
GO:0097659 nucleic acid-templated transcription No
GO:0044260 cellular macromolecule metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0043226 organelle No
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0034645 cellular macromolecule biosynthetic process No
GO:0043227 membrane-bounded organelle No
GO:0044464 cell part No
GO:0043231 intracellular membrane-bounded organelle No
GO:0003674 molecular_function No
GO:0044237 cellular metabolic process No
GO:0016070 RNA metabolic process No
GO:0043169 cation binding No
GO:0005488 binding No
GO:0044424 intracellular part No
GO:0006725 cellular aromatic compound metabolic process No
GO:0009058 biosynthetic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0043167 ion binding No
GO:0006807 nitrogen compound metabolic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0044249 cellular biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0005575 cellular_component No
GO:0043229 intracellular organelle No
GO:0032774 RNA biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0046914 transition metal ion binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
C2H2 zinc finger
Fungal Specific TF

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3308.t1
MPGQKDPKRIKKGRAKPPLCPYCQRSFSRAEHLQRHVRSHTNDKPFSCDICSKSFGRNDLMIRHKRLVHPPPPLL
VHGQNEGLADRRQTPLDVMPIPAEHSIAAIHSQNMLPWVEQSLQIRERDWEHPTEANSNVQRLDSFDEESIPCPI
MKPIEDPMQNFADFIESIGFSEGWAPDGLQSIDQFILPFDPVAALQTEFRNDTTTTDDVEDHSSHGHVPEENFLS
NFGSRLPSLQPESGEQEDRSQRSGGAIGIQLTRNIREADYRSFLKGLNYFQCVLPGDFSAPSKFKLSRFFHGFID
GLNEHLPFIHTPTLRIGSCNPALVLAIAACGAQYRFEGEEGLTLFCAAQAIILEILRQRSYGTSPNLLSSSLLST
CRGVAGFWSHSPDRSEQESAELMEAMQAILLLVIHATWGGDARAAQESMTLQGNLASLVRVHGLGEKPAFEITDR
TNDVDWCRWAKEESNRRTKFVVFCFLNLHSLMHNTPPLILNSDLGLNMPCSAEVWTAQSASAWGLVYEKAQNRKH
SCFQESISLLFKAKESSAGGEMACTAFGNHILLHALSQQLFFARQLCRLPLEQGTHRHHITGMDAVLRTWKSYWK
QTPESSTDPRNPSGPIAFTSAALLGQIYVRLQIDLGPHRALVTRDPSAIAQALAGAPNDVVRGPGFITALLHAVH
ALSIPIQLGIGFVARTYSFHWSVQHCLSALEYAHLLTTWLRSLPNMGLKIDWN*
Coding >Pro_DTO377G3_2|g3308.t1
ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT
TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCACACCAATGACAAGCCGTTCTCATGTGACATA
TGTTCGAAATCGTTTGGCAGAAATGACCTGATGATCCGCCATAAAAGACTTGTACACCCACCACCACCTCTTCTT
GTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACCCCACTTGATGTTATGCCAATTCCAGCTGAGCAC
TCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTGGAGCAATCACTCCAAATACGTGAAAGGGATTGG
GAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGATTCTTTTGATGAGGAGTCGATACCTTGTCCAATA
ATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGCTTTTCAGAAGGGTGGGCA
CCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCGTTACAAACGGAATTTCGA
AATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCCGAAGAGAACTTCTTATCT
AATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGATCCCAAAGGTCAGGTGGG
GCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTAAAAGGGCTGAACTATTTC
CAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTTTTTCATGGTTTTATCGAT
GGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGCAATCCAGCGCTTGTGCTT
GCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTGTTTTGTGCAGCACAAGCA
ATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCGAGCTCGTTGCTTTCCACT
TGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCTGCCGAGCTGATGGAGGCT
ATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCGGCACAAGAATCGATGACT
CTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCCTTCGAAATCACCGATCGC
ACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAATTCGTCGTTTTCTGTTTT
CTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTGGGGCTCAATATGCCCTGC
TCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAGGCCCAAAACAGAAAGCAT
TCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGTGGTGAAATGGCTTGCACT
GCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGTCAGTTATGTCGGCTTCCA
CTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACATGGAAGTCCTATTGGAAG
CAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACTTCAGCGGCACTTCTGGGA
CAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGGGATCCTTCAGCAATCGCA
CAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCACTTCTCCATGCAGTTCAT
GCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTTCACTGGAGCGTACAGCAC
TGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCTAATATGGGACTGAAAATC
GACTGGAATTGA
Transcript >Pro_DTO377G3_2|g3308.t1
ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT
TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCACACCAATGACAAGCCGTTCTCATGTGACATA
TGTTCGAAATCGTTTGGCAGAAATGACCTGATGATCCGCCATAAAAGACTTGTACACCCACCACCACCTCTTCTT
GTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACCCCACTTGATGTTATGCCAATTCCAGCTGAGCAC
TCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTGGAGCAATCACTCCAAATACGTGAAAGGGATTGG
GAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGATTCTTTTGATGAGGAGTCGATACCTTGTCCAATA
ATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGCTTTTCAGAAGGGTGGGCA
CCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCGTTACAAACGGAATTTCGA
AATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCCGAAGAGAACTTCTTATCT
AATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGATCCCAAAGGTCAGGTGGG
GCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTAAAAGGGCTGAACTATTTC
CAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTTTTTCATGGTTTTATCGAT
GGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGCAATCCAGCGCTTGTGCTT
GCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTGTTTTGTGCAGCACAAGCA
ATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCGAGCTCGTTGCTTTCCACT
TGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCTGCCGAGCTGATGGAGGCT
ATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCGGCACAAGAATCGATGACT
CTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCCTTCGAAATCACCGATCGC
ACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAATTCGTCGTTTTCTGTTTT
CTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTGGGGCTCAATATGCCCTGC
TCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAGGCCCAAAACAGAAAGCAT
TCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGTGGTGAAATGGCTTGCACT
GCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGTCAGTTATGTCGGCTTCCA
CTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACATGGAAGTCCTATTGGAAG
CAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACTTCAGCGGCACTTCTGGGA
CAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGGGATCCTTCAGCAATCGCA
CAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCACTTCTCCATGCAGTTCAT
GCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTTCACTGGAGCGTACAGCAC
TGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCTAATATGGGACTGAAAATC
GACTGGAATTGA
Gene >Pro_DTO377G3_2|g3308.t1
ATGCCGGGCCAAAAAGATCCCAAGAGAATCAAGAAGGGCCGTGCTAAGCCGCCCCTGTGCCCATATTGTCAGCGT
TCTTTTTCTCGCGCCGAACACCTGCAGCGGCACGTCAGAAGTCGTATGCCGTTCACTTCGCCAACACAGGTTGAA
TCATTGCTGACACTCACACCACAGACACCAATGACAAGCCGTTCTCATGTGACATATGTTCGAAATCGTTTGGCA
GAAAGTTCGTTCAATTAAGCCTATTGCCCTTCCAAGCAGGTTCTAATTGTGTTTAGTGACCTGATGATCCGCCAT
AAAAGACTTGTACACCCACCACCACCTCTTCTTGTACATGGACAAAATGAGGGGCTGGCGGATCGAAGACAAACC
CCACTTGATGTTATGCCAATTCCAGCTGAGCACTCAATAGCTGCTATTCACAGCCAAAACATGTTGCCTTGGGTG
GAGCAATCACTCCAAATACGTGAAAGGGATTGGGAGCATCCTACTGAAGCAAATTCCAACGTACAAAGGCTCGAT
TCTTTTGATGAGGTCAGGCTCTGAAAATATATCAGAAGAGTGACAAAACATGCTGATTATGAGTATGTCTAGGAG
TCGATACCTTGTCCAATAATGAAACCAATCGAAGATCCAATGCAAAATTTTGCCGATTTCATTGAAAGTATCGGC
TTTTCAGAAGGGTGGGCACCCGATGGACTTCAATCAATTGATCAATTTATTTTGCCATTTGACCCTGTGGCTGCG
TTACAAACGGAATTTCGAAATGACACAACCACTACAGATGATGTAGAGGATCATTCATCACACGGACATGTCCCC
GAAGAGAACTTCTTATCTAATTTCGGGTCCCGTCTACCGTCCTTGCAGCCAGAATCGGGCGAGCAAGAAGACAGA
TCCCAAAGGTCAGGTGGGGCCATCGGAATTCAGCTCACTCGGAATATCCGCGAGGCTGATTATCGGTCTTTTCTA
AAAGGGCTGAACTATTTCCAGTGCGTTTTGCCTGGAGATTTCTCTGCCCCTTCAAAGTTCAAATTATCTCGGTTT
TTTCATGGTTTTATCGATGGCCTCAACGAGCACCTTCCCTTTATTCATACCCCGACGCTGCGGATTGGAAGTTGC
AATCCAGCGCTTGTGCTTGCCATTGCTGCCTGTGGGGCACAGTACCGCTTTGAGGGCGAAGAAGGGTTGACTTTG
TTTTGTGCAGCACAAGCAATAATCTTGGAGATCCTGAGACAAAGAAGTTATGGTACGTCACCAAACCTTCTATCG
AGCTCGTTGCTTTCCACTTGCCGTGGGGTAGCCGGATTTTGGTCGCATTCTCCCGATCGCTCTGAGCAAGAGTCT
GCCGAGCTGATGGAGGCTATGCAGGCAATTCTACTGCTGGTCATCCATGCAACCTGGGGAGGCGATGCTAGGGCG
GCACAAGAATCGATGACTCTGCAAGGTAATCTTGCATCGCTCGTCCGTGTCCATGGGCTTGGGGAAAAACCGGCC
TTCGAAATCACCGATCGCACAAATGATGTTGACTGGTGTCGTTGGGCCAAAGAAGAATCTAACAGGCGAACGAAA
TTCGTCGTTTTCTGTTTTCTCAACCTCCACTCCCTTATGCATAACACACCCCCGTTGATTCTCAATTCTGATCTG
GGGCTCAATATGCCCTGCTCAGCCGAAGTCTGGACAGCGCAAAGTGCAAGTGCGTGGGGACTGGTGTACGAAAAG
GCCCAAAACAGAAAGCATTCATGTTTCCAAGAATCGATTTCTTTGCTCTTTAAGGCGAAAGAAAGCTCAGCCGGT
GGTGAAATGGCTTGCACTGCTTTTGGAAATCATATTCTCTTACATGCCTTGTCCCAGCAACTTTTCTTTGCTCGT
CAGTTATGTCGGCTTCCACTGGAGCAGGGGACTCATCGGCATCACATAACCGGAATGGATGCCGTGCTTCGGACA
TGGAAGTCCTATTGGAAGCAGACACCGGAGTCCAGCACCGACCCACGCAATCCCTCCGGTCCCATTGCATTCACT
TCAGCGGCACTTCTGGGACAAATCTATGTGCGACTGCAAATTGATCTTGGACCCCACCGTGCTTTGGTGACGAGG
GATCCTTCAGCAATCGCACAGGCCCTGGCTGGTGCACCCAATGATGTTGTGCGTGGTCCTGGATTTATCACAGCA
CTTCTCCATGCAGTTCATGCTTTGTCGATTCCCATACAGCTTGGAATTGGCTTCGTAGCAAGAACTTATTCATTT
CACTGGAGCGTACAGCACTGTCTCAGCGCTCTTGAATACGCTCATCTTTTGACAACGTGGCTTCGGTCCCTCCCT
AATATGGGACTGGTAAGATTGCCAAGTCACGAGAGAAAGCTGTATCTATGGATCACACGATTGCTTGATGAGACT
GACCTGGGAATCAAACTCCCTATAGAAAATCGACTGGAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail