Protein ID | Pro_DTO377G3_2|g3284.t1 |
Gene name | |
Location | scaffold_05:216727..218617 |
Strand | - |
Gene length (bp) | 1890 |
Transcript length (bp) | 1698 |
Coding sequence length (bp) | 1698 |
Protein length (aa) | 566 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF17830 | STI1 | STI1 domain | 6.6E-21 | 140 | 194 |
PF17830 | STI1 | STI1 domain | 8.5E-14 | 504 | 557 |
PF13424 | TPR_12 | Tetratricopeptide repeat | 1.7E-07 | 278 | 344 |
PF13432 | TPR_16 | Tetratricopeptide repeat | 5.6E-04 | 7 | 68 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 1.5E-01 | 73 | 102 |
PF13181 | TPR_8 | Tetratricopeptide repeat | 2.1E-05 | 317 | 344 |
PF13176 | TPR_7 | Tetratricopeptide repeat | 8.8E-04 | 319 | 348 |
PF13374 | TPR_10 | Tetratricopeptide repeat | 1.4E-02 | 39 | 65 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3284.t1 MADALKAEGNKAFSAKDYPTAIEKFSEALAIEPENHILYSNRSAVYSAQHEYQKALEDAEKAIEIKPDWSKGHAR KGAAYRGLGDLLAAHDAYDEALKIEPGNAQAKSGMEATQRAINAEATADGVSGDPTGGLGGMFNDPALFQKLANN PKTAALLGDAEFMAKLQKIQQNPNSVGEEIRDPRFLQVMSVLLGIDMNFGGEGAEPPIPSAKPSTSQSKKEPTPE PEPVDEEAIAKKQAKEAADAEKKIGNDFYKKKQFDEAIEHYTKAWDLFKDITYLNNIGAAKFEKADYQGAIEICQ KATEEGRDLRADFTLMAKAYTRIGSAHEKLGDLAQAIEFYNKSLMEHRTPDTLTKLRNAEKTKITTERNAYIDPA EAEKARELGQQKFQEGDWPGAVDAFTEMTKRAPDDPRGYSNRAAALIKLMAFPGAVQDCDEAIKRDAKFIRAYMR KGAALIAMKEYNRALDTFTEAADHDDGKHAREIEQQQQKCLDAQFSARAGETEEQTMARIQNDPDIMAVLQDPVM QSILQQAKSDPAALQEHMKNSQVRMKIQKLMAAGVIRMGR* |
Coding | >Pro_DTO377G3_2|g3284.t1 ATGGCTGACGCTTTGAAGGCAGAAGGCAACAAGGCCTTTTCTGCTAAGGACTATCCTACTGCTATTGAGAAATTC TCTGAGGCCCTTGCTATCGAACCCGAAAACCACATCCTCTACTCCAACCGCTCTGCCGTCTACTCCGCCCAGCAC GAATATCAAAAAGCCCTCGAAGATGCCGAGAAGGCGATCGAGATCAAGCCCGATTGGTCCAAGGGCCATGCCCGC AAGGGTGCTGCGTACCGCGGCCTCGGAGATCTGTTGGCTGCGCATGATGCCTATGACGAGGCCCTGAAGATCGAG CCCGGCAACGCACAGGCCAAGTCCGGTATGGAGGCGACCCAGCGCGCCATCAATGCGGAGGCTACCGCAGATGGT GTCAGTGGTGACCCAACAGGAGGTCTCGGTGGAATGTTCAACGACCCGGCTCTGTTCCAGAAGTTGGCCAACAAC CCCAAGACCGCCGCCCTGCTGGGAGATGCCGAGTTCATGGCTAAGCTGCAGAAGATCCAACAGAACCCTAACAGT GTCGGAGAGGAAATCCGCGACCCGCGCTTCCTTCAGGTTATGAGTGTGCTTCTCGGTATTGATATGAACTTCGGT GGCGAGGGAGCGGAGCCTCCTATTCCTTCTGCTAAACCCAGCACCTCGCAGTCCAAGAAGGAGCCCACCCCGGAG CCTGAGCCAGTAGACGAGGAGGCAATCGCCAAGAAGCAGGCCAAGGAGGCTGCTGATGCTGAGAAGAAGATTGGT AACGATTTCTACAAGAAGAAGCAGTTCGATGAGGCCATTGAGCACTATACCAAGGCTTGGGACTTGTTCAAGGAT ATCACCTACCTGAACAACATTGGTGCTGCCAAGTTCGAGAAGGCCGATTACCAAGGCGCAATCGAGATCTGCCAA AAGGCTACCGAAGAGGGCCGCGACTTGCGTGCCGACTTCACGCTGATGGCCAAGGCCTACACCCGAATTGGTTCT GCACACGAGAAGCTGGGCGACCTCGCGCAGGCCATCGAATTCTACAACAAGTCGCTCATGGAGCACCGCACCCCT GATACCCTGACCAAGCTCCGTAACGCCGAGAAGACCAAGATCACGACCGAGAGGAACGCTTACATTGACCCTGCC GAGGCCGAGAAGGCTCGCGAGCTTGGCCAGCAGAAGTTCCAGGAAGGCGACTGGCCCGGTGCCGTTGACGCTTTC ACCGAGATGACCAAGCGTGCTCCCGACGACCCCCGCGGTTACTCTAACCGTGCCGCAGCCCTCATCAAGCTCATG GCATTCCCCGGTGCCGTGCAGGACTGCGACGAGGCCATTAAGCGCGATGCCAAATTCATCCGCGCGTACATGCGT AAGGGCGCTGCCCTTATCGCCATGAAGGAATACAACCGTGCCCTAGACACCTTCACCGAGGCCGCCGACCACGAC GACGGCAAGCACGCTCGCGAGATCGAGCAGCAGCAGCAGAAGTGCCTGGACGCCCAGTTCAGCGCTCGCGCTGGT GAGACCGAGGAGCAGACCATGGCTCGTATCCAAAATGACCCCGACATCATGGCCGTCCTCCAGGACCCCGTTATG CAGAGCATTCTCCAGCAGGCTAAGAGCGACCCCGCTGCCCTGCAGGAGCACATGAAGAACTCGCAGGTACGGATG AAGATCCAGAAGCTGATGGCTGCTGGCGTTATCCGCATGGGGCGGTAA |
Transcript | >Pro_DTO377G3_2|g3284.t1 ATGGCTGACGCTTTGAAGGCAGAAGGCAACAAGGCCTTTTCTGCTAAGGACTATCCTACTGCTATTGAGAAATTC TCTGAGGCCCTTGCTATCGAACCCGAAAACCACATCCTCTACTCCAACCGCTCTGCCGTCTACTCCGCCCAGCAC GAATATCAAAAAGCCCTCGAAGATGCCGAGAAGGCGATCGAGATCAAGCCCGATTGGTCCAAGGGCCATGCCCGC AAGGGTGCTGCGTACCGCGGCCTCGGAGATCTGTTGGCTGCGCATGATGCCTATGACGAGGCCCTGAAGATCGAG CCCGGCAACGCACAGGCCAAGTCCGGTATGGAGGCGACCCAGCGCGCCATCAATGCGGAGGCTACCGCAGATGGT GTCAGTGGTGACCCAACAGGAGGTCTCGGTGGAATGTTCAACGACCCGGCTCTGTTCCAGAAGTTGGCCAACAAC CCCAAGACCGCCGCCCTGCTGGGAGATGCCGAGTTCATGGCTAAGCTGCAGAAGATCCAACAGAACCCTAACAGT GTCGGAGAGGAAATCCGCGACCCGCGCTTCCTTCAGGTTATGAGTGTGCTTCTCGGTATTGATATGAACTTCGGT GGCGAGGGAGCGGAGCCTCCTATTCCTTCTGCTAAACCCAGCACCTCGCAGTCCAAGAAGGAGCCCACCCCGGAG CCTGAGCCAGTAGACGAGGAGGCAATCGCCAAGAAGCAGGCCAAGGAGGCTGCTGATGCTGAGAAGAAGATTGGT AACGATTTCTACAAGAAGAAGCAGTTCGATGAGGCCATTGAGCACTATACCAAGGCTTGGGACTTGTTCAAGGAT ATCACCTACCTGAACAACATTGGTGCTGCCAAGTTCGAGAAGGCCGATTACCAAGGCGCAATCGAGATCTGCCAA AAGGCTACCGAAGAGGGCCGCGACTTGCGTGCCGACTTCACGCTGATGGCCAAGGCCTACACCCGAATTGGTTCT GCACACGAGAAGCTGGGCGACCTCGCGCAGGCCATCGAATTCTACAACAAGTCGCTCATGGAGCACCGCACCCCT GATACCCTGACCAAGCTCCGTAACGCCGAGAAGACCAAGATCACGACCGAGAGGAACGCTTACATTGACCCTGCC GAGGCCGAGAAGGCTCGCGAGCTTGGCCAGCAGAAGTTCCAGGAAGGCGACTGGCCCGGTGCCGTTGACGCTTTC ACCGAGATGACCAAGCGTGCTCCCGACGACCCCCGCGGTTACTCTAACCGTGCCGCAGCCCTCATCAAGCTCATG GCATTCCCCGGTGCCGTGCAGGACTGCGACGAGGCCATTAAGCGCGATGCCAAATTCATCCGCGCGTACATGCGT AAGGGCGCTGCCCTTATCGCCATGAAGGAATACAACCGTGCCCTAGACACCTTCACCGAGGCCGCCGACCACGAC GACGGCAAGCACGCTCGCGAGATCGAGCAGCAGCAGCAGAAGTGCCTGGACGCCCAGTTCAGCGCTCGCGCTGGT GAGACCGAGGAGCAGACCATGGCTCGTATCCAAAATGACCCCGACATCATGGCCGTCCTCCAGGACCCCGTTATG CAGAGCATTCTCCAGCAGGCTAAGAGCGACCCCGCTGCCCTGCAGGAGCACATGAAGAACTCGCAGGTACGGATG AAGATCCAGAAGCTGATGGCTGCTGGCGTTATCCGCATGGGGCGGTAA |
Gene | >Pro_DTO377G3_2|g3284.t1 ATGGCTGACGCTTTGAAGGCAGAAGGCAACAAGGCCTTTTCTGCTAAGGACTATCCTACTGCTATGTACGCGCTA CCCCACCTTTAACGCTGTGACTTCGTCAAAGCAGAAACTGATAAAACCAGTGAGAAATTCTCTGAGGCCCTTGCT ATCGAACCCGAAAACCACATCCTCTACTCCAACCGCTCTGCCGTCTACTCCGCCCAGCACGAATATCAAAAAGCC CTCGAAGATGCCGAGAAGGCGATCGAGATCAAGCCCGATTGGTCCAAGGGCCATGCCCGCAAGGGTGCTGCGTAC CGCGGCCTCGGAGATCTGTGTACGTTATTCTAGTTGTGCCCGAATTGGTGGGATAATTGGCATTGTGACAAGGTG CTAACTGATGGCAGTGGCTGCGCATGATGCCTATGACGAGGCCCTGAAGATCGAGCCCGGCAACGCACAGGCCAA GTCCGGTATGGAGGCGACCCAGCGCGCCATCAATGCGGAGGCTACCGCAGATGGTGTCAGTGGTGACCCAACAGG AGGTCTCGGTGGAATGTTCAACGACCCGGCTCTGTTCCAGAAGTTGGCCAACAACCCCAAGACCGCCGCCCTGCT GGGAGATGCCGAGTTCATGGCTAAGCTGCAGAAGATCCAACAGAACCCTAACAGTGTCGGAGAGGAAATCCGCGA CCCGCGCTTCCTTCAGGTTATGAGTGTGCTTCTCGGTATTGATATGAACTTCGGTGGCGAGGGAGCGGAGCCTCC TATTCCTTCTGCTAAACCCAGCACCTCGCAGTCCAAGAAGGAGCCCACCCCGGAGCCTGAGCCAGTAGACGAGGA GGCAATCGCCAAGAAGCAGGCCAAGGAGGCTGCTGATGCTGAGAAGAAGATTGGTAACGATTTCTACAAGAAGAA GCAGTTCGATGAGGCCATTGAGCACTATACCAAGGCTTGGGACTTGTTCAAGGATATCACCTACCTGAACAACAT TGGTGCTGCCAAGTTCGAGAAGGCCGATTACCAAGGCGCAATCGAGATCTGCCAAAAGGCTACCGAAGAGGGCCG CGACTTGCGTGCCGACTTCACGCTGATGGCCAAGGCCTACACCCGAATTGGTTCTGCACACGAGAAGCTGGGCGA CCTCGCGCAGGCCATCGAATTCTACAACAAGTCGCTCATGGAGCACCGCACCCCTGATACCCTGACCAAGCTCCG TAACGCCGAGAAGACCAAGATCACGACCGAGAGGAACGCTTACATTGACCCTGCCGAGGCCGAGAAGGCTCGCGA GCTTGGCCAGCAGAAGTTCCAGGAAGGCGACTGGCCCGGTGCCGTTGACGCTTTCACCGAGATGACCAAGCGTGC TCCCGACGACCCCCGCGGTTACTCTAACCGTGCCGCAGCCCTCATCAAGCTCATGGCATTCCCCGGTGCCGTGCA GGACTGCGACGAGGCCATTAAGCGCGATGCCAAATTCATCCGCGCGTACATGCGTAAGGGCGCTGCCCTTATCGC CATGAAGGAATACAACCGTGCCCTAGACACCTTCACCGAGGCCGCCGACCACGACGACGGCAAGCACGCTCGCGA GATCGAGCAGCAGCAGCAGAAGTGCCTGGACGCCCAGTTCAGCGCTCGCGCTGGTGAGACCGAGGAGCAGACCAT GGCTCGTATCCAAAATGACCCCGACGTAAGATCTAATTTCCCCTGCACCGGATTATTCAGCATGAAGTTTACTAA CATTTTCTCCAGATCATGGCCGTCCTCCAGGACCCCGTTATGCAGAGCATTCTCCAGCAGGCTAAGAGCGACCCC GCTGCCCTGCAGGAGCACATGAAGAACTCGCAGGTACGGATGAAGATCCAGAAGCTGATGGCTGCTGGCGTTATC CGCATGGGGCGGTAA |