Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	Pro_DTO377G3_2|g3268.t1
Gene name
Location	scaffold_05:168357..171430
Strand	+
Gene length (bp)	3073
Transcript length (bp)	2514
Coding sequence length (bp)	2514
Protein length (aa)	838

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01494	FAD_binding_3	FAD binding domain	1.3E-74	249	604
PF13561	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	1.8E-47	15	236
PF00106	adh_short	short chain dehydrogenase	4.2E-41	10	201
PF07976	Phe_hydrox_dim	Phenol hydroxylase, C-terminal dimerisation domain	4.9E-24	629	781
PF08659	KR	KR domain	6.1E-09	10	162

GO

GO Term	Description	Terminal node
GO:0071949	FAD binding	Yes
GO:1901265	nucleoside phosphate binding	No
GO:0097159	organic cyclic compound binding	No
GO:0043167	ion binding	No
GO:0005488	binding	No
GO:0050660	flavin adenine dinucleotide binding	No
GO:0000166	nucleotide binding	No
GO:0043168	anion binding	No
GO:1901363	heterocyclic compound binding	No
GO:0003674	molecular_function	No
GO:0036094	small molecule binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g3268.t1 MSRFSLKGRTALVTGGARGCGLAFARGLAEAGADVAVFDVISPEEGFHAIEKDCGVRTAYYKVDVSSQESLQEGF ASFQKDFENALDICVPCAGINRHLPFLEFTYKDHQDLLSINVLGLYFTAQLAAKQMIANKTKHGSIVLVASMASH IAVRSQLCSAYCGTKGAVRSMCPAIAKELAEYGIRVNSISPGFVKTEMTASFPHLLEGWKSEVMNGRIAEPEDIM GACVFLASDANHEGYRIGSVDASTTVVVVGAGPSGLMLACNLVRFGIAVVILDDRPDKTSTGKADGMQPKTIETF RQLRLADPLLRNGARVYDISFWESTANDSLRRTGRKVHYPEHVGASDPYILLAHQGMVEEVMIDDMEARGVSITR NSKFVSCSPVNGTTQLDIIYEDVTTNTAHKIRANYLVGCDGARSKVRSFIPDAELEGELTNAAWGVLDGVIDTDF PDLWSKVALRSHSAGSILWIPREKGMTRLYVELSSTDGERVEKSKATTEYVMSRAREAMHPFSLEWKTVEWFGTY VVGQRVAKRFMDSEANIFIAGDAGHCHSALAAQGANTSMHDSFNLAWKLNLLVRGLAKPSLLHTYEEERQKIAYD LINFDVEHCKAFAAGDEELAKNFDSNIRFISGIGAEYAPGMLTQAPTTTFRLQPGMLQLPAKVTRYIDANPVDIE LDVPLLGQFKIYIFVPNVYRSRESLENICEQLQYILAGVSVRANQSYEKHPRGHSPSDEFVQAQRYTSVSNAFTF AMVTQSSQSEFEIADLPEILQASRWTLYVDNIGGPSCTEKWFGDLNQEKIGIAVVRPDGYVGAIDTWDTEQVGVI GQWLQDYFSFLV*
Coding	>Pro_DTO377G3_2|g3268.t1 ATGTCGAGATTTTCTTTGAAAGGGCGCACAGCACTGGTTACAGGAGGTGCTCGGGGTTGCGGGCTAGCATTTGCG CGGGGGCTCGCCGAGGCCGGCGCTGATGTAGCTGTGTTTGATGTTATTTCGCCAGAGGAAGGATTCCATGCAATC GAAAAGGATTGCGGTGTCCGAACTGCGTATTACAAAGTCGATGTCTCATCCCAGGAGTCTTTGCAAGAAGGGTTC GCTAGCTTCCAGAAGGATTTTGAAAACGCTCTCGATATTTGCGTTCCTTGTGCTGGTATTAATCGACATCTTCCA TTCCTCGAGTTTACCTACAAGGATCATCAGGATCTACTATCTATCAATGTCCTCGGGCTTTACTTCACTGCCCAG CTCGCAGCCAAGCAAATGATCGCGAACAAAACAAAGCACGGCAGCATCGTGTTAGTCGCCAGTATGGCGAGCCAT ATCGCTGTCCGCAGCCAGCTATGTTCGGCTTATTGTGGCACAAAGGGCGCAGTCAGATCGATGTGTCCCGCGATC GCCAAAGAGCTGGCTGAATATGGTATCCGAGTCAATTCCATCTCTCCAGGATTCGTGAAAACAGAAATGACCGCT TCATTCCCCCATTTGCTCGAGGGCTGGAAGTCCGAAGTCATGAACGGTCGGATTGCCGAACCAGAAGATATCATG GGGGCGTGTGTATTCCTCGCAAGCGACGCGAACCACGAAGGCTACAGAATCGGCTCTGTCGATGCTTCTACTACC GTTGTGGTGGTGGGCGCGGGACCGTCGGGGCTGATGCTTGCATGTAATCTTGTTCGCTTTGGAATCGCCGTGGTG ATTCTGGACGATCGTCCCGACAAGACATCCACAGGAAAGGCCGACGGAATGCAACCTAAGACCATCGAAACATTC AGACAGCTTCGTTTGGCAGACCCATTGCTGAGAAATGGAGCTCGGGTTTACGACATATCCTTCTGGGAGTCAACT GCCAACGACTCACTTCGACGCACAGGTCGCAAAGTCCACTACCCCGAGCACGTTGGTGCCTCCGACCCTTATATC TTGCTAGCCCATCAGGGGATGGTTGAGGAGGTCATGATTGACGATATGGAGGCACGGGGTGTGTCTATTACGCGG AATAGCAAATTCGTGTCTTGTTCGCCTGTGAATGGAACGACACAATTGGATATTATCTATGAGGATGTCACCACA AATACGGCTCACAAGATCAGAGCGAATTATCTGGTTGGTTGCGATGGAGCTCGATCGAAGGTTCGATCATTCATC CCGGATGCTGAGCTCGAGGGCGAATTAACAAACGCGGCGTGGGGAGTGCTGGATGGTGTGATCGATACGGACTTC CCTGATCTATGGAGTAAAGTGGCCTTGCGGTCTCATTCCGCTGGGTCGATCTTATGGATTCCGCGCGAGAAGGGT ATGACTCGATTATATGTGGAGTTGAGTTCCACCGACGGGGAGCGAGTGGAAAAATCAAAGGCAACGACTGAATAT GTCATGAGTCGCGCGAGGGAGGCAATGCATCCGTTCAGCCTAGAGTGGAAGACAGTGGAGTGGTTTGGAACATAT GTTGTGGGCCAGCGGGTTGCAAAACGCTTCATGGATTCAGAGGCAAATATATTCATTGCAGGAGACGCCGGCCAC TGTCACTCTGCTCTTGCAGCCCAAGGTGCCAACACGAGTATGCACGACAGCTTCAACCTCGCATGGAAGCTCAAC CTCCTAGTCCGAGGACTGGCCAAGCCTTCCTTACTCCACACCTACGAAGAAGAAAGACAAAAGATAGCATACGAC CTCATCAACTTCGATGTTGAACACTGCAAAGCGTTCGCAGCAGGCGATGAAGAATTGGCCAAGAACTTCGACAGC AATATTCGGTTCATATCCGGCATTGGAGCCGAATATGCTCCGGGAATGTTGACACAAGCGCCAACCACCACATTT CGCCTCCAGCCTGGAATGCTTCAGCTGCCAGCTAAGGTCACTCGCTATATTGATGCTAACCCAGTCGATATCGAG TTGGATGTTCCACTCTTGGGTCAATTCAAGATCTACATCTTTGTGCCGAATGTTTACCGCTCCCGGGAATCGCTG GAGAATATATGTGAACAGTTGCAATATATTCTTGCTGGTGTCAGCGTGCGAGCAAATCAGTCGTATGAGAAACAT CCGAGGGGGCATTCCCCGTCAGATGAATTTGTTCAGGCTCAGCGCTACACTTCTGTCTCCAATGCTTTTACTTTC GCAATGGTCACGCAATCTTCCCAGTCTGAGTTTGAGATCGCTGATCTGCCAGAAATACTGCAGGCTAGTCGGTGG ACATTATATGTCGACAATATTGGAGGGCCGAGTTGTACTGAGAAGTGGTTTGGGGATTTGAACCAGGAGAAAATT GGGATCGCTGTTGTGAGGCCTGACGGATATGTTGGGGCTATTGATACTTGGGACACCGAACAAGTGGGTGTCATA GGGCAGTGGTTGCAGGATTATTTCTCTTTCTTGGTATAA
Transcript	>Pro_DTO377G3_2|g3268.t1 ATGTCGAGATTTTCTTTGAAAGGGCGCACAGCACTGGTTACAGGAGGTGCTCGGGGTTGCGGGCTAGCATTTGCG CGGGGGCTCGCCGAGGCCGGCGCTGATGTAGCTGTGTTTGATGTTATTTCGCCAGAGGAAGGATTCCATGCAATC GAAAAGGATTGCGGTGTCCGAACTGCGTATTACAAAGTCGATGTCTCATCCCAGGAGTCTTTGCAAGAAGGGTTC GCTAGCTTCCAGAAGGATTTTGAAAACGCTCTCGATATTTGCGTTCCTTGTGCTGGTATTAATCGACATCTTCCA TTCCTCGAGTTTACCTACAAGGATCATCAGGATCTACTATCTATCAATGTCCTCGGGCTTTACTTCACTGCCCAG CTCGCAGCCAAGCAAATGATCGCGAACAAAACAAAGCACGGCAGCATCGTGTTAGTCGCCAGTATGGCGAGCCAT ATCGCTGTCCGCAGCCAGCTATGTTCGGCTTATTGTGGCACAAAGGGCGCAGTCAGATCGATGTGTCCCGCGATC GCCAAAGAGCTGGCTGAATATGGTATCCGAGTCAATTCCATCTCTCCAGGATTCGTGAAAACAGAAATGACCGCT TCATTCCCCCATTTGCTCGAGGGCTGGAAGTCCGAAGTCATGAACGGTCGGATTGCCGAACCAGAAGATATCATG GGGGCGTGTGTATTCCTCGCAAGCGACGCGAACCACGAAGGCTACAGAATCGGCTCTGTCGATGCTTCTACTACC GTTGTGGTGGTGGGCGCGGGACCGTCGGGGCTGATGCTTGCATGTAATCTTGTTCGCTTTGGAATCGCCGTGGTG ATTCTGGACGATCGTCCCGACAAGACATCCACAGGAAAGGCCGACGGAATGCAACCTAAGACCATCGAAACATTC AGACAGCTTCGTTTGGCAGACCCATTGCTGAGAAATGGAGCTCGGGTTTACGACATATCCTTCTGGGAGTCAACT GCCAACGACTCACTTCGACGCACAGGTCGCAAAGTCCACTACCCCGAGCACGTTGGTGCCTCCGACCCTTATATC TTGCTAGCCCATCAGGGGATGGTTGAGGAGGTCATGATTGACGATATGGAGGCACGGGGTGTGTCTATTACGCGG AATAGCAAATTCGTGTCTTGTTCGCCTGTGAATGGAACGACACAATTGGATATTATCTATGAGGATGTCACCACA AATACGGCTCACAAGATCAGAGCGAATTATCTGGTTGGTTGCGATGGAGCTCGATCGAAGGTTCGATCATTCATC CCGGATGCTGAGCTCGAGGGCGAATTAACAAACGCGGCGTGGGGAGTGCTGGATGGTGTGATCGATACGGACTTC CCTGATCTATGGAGTAAAGTGGCCTTGCGGTCTCATTCCGCTGGGTCGATCTTATGGATTCCGCGCGAGAAGGGT ATGACTCGATTATATGTGGAGTTGAGTTCCACCGACGGGGAGCGAGTGGAAAAATCAAAGGCAACGACTGAATAT GTCATGAGTCGCGCGAGGGAGGCAATGCATCCGTTCAGCCTAGAGTGGAAGACAGTGGAGTGGTTTGGAACATAT GTTGTGGGCCAGCGGGTTGCAAAACGCTTCATGGATTCAGAGGCAAATATATTCATTGCAGGAGACGCCGGCCAC TGTCACTCTGCTCTTGCAGCCCAAGGTGCCAACACGAGTATGCACGACAGCTTCAACCTCGCATGGAAGCTCAAC CTCCTAGTCCGAGGACTGGCCAAGCCTTCCTTACTCCACACCTACGAAGAAGAAAGACAAAAGATAGCATACGAC CTCATCAACTTCGATGTTGAACACTGCAAAGCGTTCGCAGCAGGCGATGAAGAATTGGCCAAGAACTTCGACAGC AATATTCGGTTCATATCCGGCATTGGAGCCGAATATGCTCCGGGAATGTTGACACAAGCGCCAACCACCACATTT CGCCTCCAGCCTGGAATGCTTCAGCTGCCAGCTAAGGTCACTCGCTATATTGATGCTAACCCAGTCGATATCGAG TTGGATGTTCCACTCTTGGGTCAATTCAAGATCTACATCTTTGTGCCGAATGTTTACCGCTCCCGGGAATCGCTG GAGAATATATGTGAACAGTTGCAATATATTCTTGCTGGTGTCAGCGTGCGAGCAAATCAGTCGTATGAGAAACAT CCGAGGGGGCATTCCCCGTCAGATGAATTTGTTCAGGCTCAGCGCTACACTTCTGTCTCCAATGCTTTTACTTTC GCAATGGTCACGCAATCTTCCCAGTCTGAGTTTGAGATCGCTGATCTGCCAGAAATACTGCAGGCTAGTCGGTGG ACATTATATGTCGACAATATTGGAGGGCCGAGTTGTACTGAGAAGTGGTTTGGGGATTTGAACCAGGAGAAAATT GGGATCGCTGTTGTGAGGCCTGACGGATATGTTGGGGCTATTGATACTTGGGACACCGAACAAGTGGGTGTCATA GGGCAGTGGTTGCAGGATTATTTCTCTTTCTTGGTATAA
Gene	>Pro_DTO377G3_2|g3268.t1 ATGTCGAGAGTGAGTGTTTCCAACTTTTTCTTGGCCCGAGCTAACCGAGCCAGTTTTCTTTGAAAGGGCGCACAG CACTGGTTACAGGAGGTGCTCGGGGTTGCGGGCTAGCATTTGCGCGGGGGCTCGCCGAGGCCGGCGCTGATGTAG CTGTGTTTGATGTTATTTCGCCAGAGGAAGGATTCCATGCAATCGAAAAGGATTGCGGTGTCCGAACTGCGTATT ACAAGTGGGTTGACTGTTCATTTCAGGTTTCATCGCTAACAACAACAGAGTCGATGTCTCATCCCAGGAGTCTTT GCAAGAAGGGTTCGCTAGCTTCCAGAAGGATTTTGAAAACGCTCTCGATATTTGCGTTCCTTGTGCTGGTATTAA TCGACATCTTCCATTCCTCGAGTTTACCTACAAGGATCATCAGGATCTACTATCTATCAATGTCCTCGGGCTTTA CTTCACTGCCCAGCTCGCAGCCAAGCAAATGATCGCGAACAAAACAAAGCACGGCAGCATCGTGTTAGTCGCCAG TATGGCGAGCCATATCGCTGTCCGCAGCCAGCTATGTTCGGCTTATTGTGGCACAAAGGGCGCAGTCAGATCGAT GTGTCCCGCGATCGCCAAAGAGCTGGCTGAATATGTGAGTTGGGCGCAAAATATTGTACGGACGGTGATTAATTT AGTATAACAGGGTATCCGAGTCAATTCCATCTCTCCAGGATTCGTGAAAACAGAAATGACCGCTTCAGTAAGTTC CCACCAAGGCAGTGCACCAGGTTATCCGCTAATGGCCAGTTCCCCCATTTGCTCGAGGGCTGGAAGTCCGAAGTC ATGAACGGTCGGATTGCCGAACCAGAAGATATCATGGGGGCGTGTGTATTCCTCGCAAGCGACGCGAGTTCGTAC ATGACCGGGTCGGACATTGTTGTGGACGGTGGGGTGACACGATGGTGATAAACATCTGCAGTGAAGAGTGGGGGT TTCCCCCGCAGCATCGATTTCAATAAATAGAGAAGATAGAAATGAATTAAGTGATTGTCAACCAACAATTGAATT CTATAATGTCACCTAGTGCAGACCACGAAGGCTACAGAATCGGCTCTGTCGATGCTTCTACTACCGTTGTGGTGG TGGGCGCGGGACCGTCGGGGCTGATGCTTGCGTATGTAAATTCCTTCTTCGACGGACGGTATACTAACACATTTG AAGATGTAATCTTGTTCGCTTTGGAATCGCCGTGGTGATTCTGGACGATCGTCCCGACAAGACATCCACAGGAAA GGCCGACGGAATGCAACCTAAGACCATCGAAACATTCAGACAGCTTCGTTTGGCAGACCCATTGCTGAGAAATGG AGCTCGGGTTTACGACATATCCTTCTGGGTAGGACTTAGGTCAATTCTGCTCCTGGATTTGGCTAACAAATTGGC AGGAGTCAACTGCCAACGACTCACTTCGACGCACAGGTCGCAAAGTCCACTACCCCGAGCACGTTGGTGCCTCCG ACCCTTATATCTTGCTAGCCCATCAGGGGATGGTTGAGGAGGTCATGATTGACGATATGGAGGCACGGGGTGTGT CTATTACGCGGAATAGCAAATTCGTGTCTTGTTCGCCTGTGAATGGAACGACACAATTGGATATTATCTATGAGG ATGTCACCACAAATACGGCTCACAAGATCAGAGCGAATTATCTGGTTGGTTGCGATGGAGCTCGATCGAAGGTTC GATCATTCATCCCGGATGCTGAGCTCGAGGGCGAATTAACAAACGCGGCGTGGGGAGTGCTGGATGGTATGTCTT TTCAATCTCTTGGCACGATTTTTGGCTCACCAAATAGGTGTGATCGATACGGACTTCCCTGATCTATGGAGTAAA GTGGCCTTGCGGTCTCATTCCGCTGGGTCGATCTTATGGATTCCGCGCGAGAAGGGTATGACTCGATTATATGTG GAGTTGAGTTCCACCGACGGGGAGCGAGTGGAAAAATCAAAGGCAACGACTGAATATGTCATGAGTCGCGCGAGG GAGGCAATGCATCCGTTCAGCCTAGAGTGGAAGACAGTGGAGTGGTTTGGAACATATGTTGTGGGCCAGCGGGTT GCAAAACGCTTCATGGATTCAGAGGCAAATATATTCATTGCAGGAGACGTATGTTGCACCGGATTGACCTCACAT CACCCATAGTCTAATCAATATACAGGCCGGCCACTGTCACTCTGCTCTTGCAGCCCAAGGTGCCAACACGAGTAT GCACGACAGCTTCAACCTCGCATGGAAGCTCAACCTCCTAGTCCGAGGACTGGCCAAGCCTTCCTTACTCCACAC CTACGAAGAAGAAAGACAAAAGATAGCATACGACCTCATCAACTTCGATGTTGAACACTGCAAAGCGTTCGCAGC AGGCGATGAAGAATTGGCCAAGAACTTCGACAGCAATATTCGGTTCATATCCGGCATTGGAGCCGAATATGCTCC GGGAATGTTGACACAAGCGCCAACCACCACATTTCGCCTCCAGCCTGGAATGCTTCAGCTGCCAGCTAAGGTCAC TCGCTATATTGATGCTAACCCAGTCGATATCGAGTTGGATGTTCCACTCTTGGGTCAATTCAAGATCTACATCTT TGTGCCGAATGTTTACCGCTCCCGGGAATCGCTGGAGAATATATGTGAACAGTTGCAATATATTCTTGCTGGTGT CAGCGTGCGAGCAAATCAGTCGTATGAGAAACATCCGAGGGGGCATTCCCCGTCAGATGAATTTGTTCAGGCTCA GCGCTACACTTCTGTCTCCAATGCTTTTACTTTCGCAATGGTCACGCAATCTTCCCAGTCTGAGTTTGAGATCGC TGATCTGCCAGAAATACTGCAGGCTAGTCGGTGGACATTATATGTCGACAATATTGGAGGGCCGAGTTGTACTGA GAAGTGGTTTGGGGATTTGAACCAGGAGAAAATTGGGATCGCTGTTGTGAGGCCTGACGGATATGTTGGGGCTAT TGATACTTGGGACACCGAACAAGTGGGTGTCATAGGGCAGTGGTTGCAGGATTATTTCTCTTTCTTGGTATAA