Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g3260.t1
Gene name
Location	scaffold_05:154580..155033
Strand	+
Gene length (bp)	453
Transcript length (bp)	381
Coding sequence length (bp)	381
Protein length (aa)	127

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01248	Ribosomal_L7Ae	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family	3.1E-26	20	109

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	8896
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g9769.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g1187.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g8652.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g6751.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g6009.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g8623.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g8938.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g4462.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g8063.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g6522.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g5190.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g23.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g8328.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g9404.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g9317.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g9190.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g7870.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g6885.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g8964.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g9638.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g4365.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g9668.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g5062.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g8345.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g8302.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g2962.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g6003.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g9398.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g9518.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g3706.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g9366.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g8633.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g6203.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g3260.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g3260.t1 MAEDTSAAWPIADEALAQSLLDLVQQAAHYRQLKKGANECTKSLNRGTSELVIMAADTSPLAIVLHLPLLAEDKN VPYVYVPSKMALGRATGVSRPVIAASITTNEASDLTAQIRAIKNQVERLMI*
Coding	>Pro_DTO377G3_2|g3260.t1 ATGGCCGAAGATACTAGCGCAGCGTGGCCCATCGCCGATGAGGCCCTCGCCCAGAGCCTTCTTGATCTTGTGCAG CAGGCGGCGCACTATCGTCAATTGAAGAAGGGCGCAAACGAGTGCACCAAGTCCCTTAACCGCGGAACCTCGGAA CTTGTCATCATGGCCGCCGATACCAGCCCTCTCGCCATTGTGCTTCACTTGCCTCTTTTGGCCGAGGACAAGAAC GTTCCCTACGTTTACGTTCCCAGTAAGATGGCTCTTGGCCGTGCTACTGGTGTCTCCCGTCCCGTGATTGCTGCC TCCATCACTACCAACGAGGCCAGTGACCTGACCGCCCAGATCCGCGCCATCAAGAACCAAGTCGAGCGTCTCATG ATCTAA
Transcript	>Pro_DTO377G3_2|g3260.t1 ATGGCCGAAGATACTAGCGCAGCGTGGCCCATCGCCGATGAGGCCCTCGCCCAGAGCCTTCTTGATCTTGTGCAG CAGGCGGCGCACTATCGTCAATTGAAGAAGGGCGCAAACGAGTGCACCAAGTCCCTTAACCGCGGAACCTCGGAA CTTGTCATCATGGCCGCCGATACCAGCCCTCTCGCCATTGTGCTTCACTTGCCTCTTTTGGCCGAGGACAAGAAC GTTCCCTACGTTTACGTTCCCAGTAAGATGGCTCTTGGCCGTGCTACTGGTGTCTCCCGTCCCGTGATTGCTGCC TCCATCACTACCAACGAGGCCAGTGACCTGACCGCCCAGATCCGCGCCATCAAGAACCAAGTCGAGCGTCTCATG ATCTAA
Gene	>Pro_DTO377G3_2|g3260.t1 ATGGCCGAAGATACTAGCGCAGCGTGGCCCATCGCCGATGAGGCCCTCGCCCAGAGCCTTCTTGATCTTGTGCAG CAGGCGGCGCACTATCGTCAATTGAAGAAGGGCGCAAACGAGTGCACCAAGTCCCTTAACCGCGGAACCTCGGAA CTTGTCATCATGGCCGCCGATACCAGCCCTCTCGCCATTGTGCTTCACTTGCCTCTTTTGGCCGAGGACAAGAAC GTGAGTCCAATATCCTAGAGCCCATACCCTAGGGCGCTACACCAGATAAACAAAACTAATCATTCGAATTAGGTT CCCTACGTTTACGTTCCCAGTAAGATGGCTCTTGGCCGTGCTACTGGTGTCTCCCGTCCCGTGATTGCTGCCTCC ATCACTACCAACGAGGCCAGTGACCTGACCGCCCAGATCCGCGCCATCAAGAACCAAGTCGAGCGTCTCATGATC TAA