Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3215.t1
Gene name
Location	scaffold_04:990189..991745
Strand	-
Gene length (bp)	1556
Transcript length (bp)	1446
Coding sequence length (bp)	1446
Protein length (aa)	482

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03849	Tfb2	Transcription factor Tfb2	3.6E-133	10	383
PF18307	Tfb2_C	Transcription factor Tfb2 (p52) C-terminal domain	1.5E-23	409	474

GO

GO Term	Description	Terminal node
GO:0001671	ATPase activator activity	Yes
GO:0006289	nucleotide-excision repair	Yes
GO:0000439	transcription factor TFIIH core complex	Yes
GO:0090575	RNA polymerase II transcription regulator complex	No
GO:0032991	protein-containing complex	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0005575	cellular_component	No
GO:0071704	organic substance metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0008150	biological_process	No
GO:0006281	DNA repair	No
GO:0006259	DNA metabolic process	No
GO:0033554	cellular response to stress	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0140513	nuclear protein-containing complex	No
GO:0043170	macromolecule metabolic process	No
GO:0008152	metabolic process	No
GO:0044238	primary metabolic process	No
GO:0098772	molecular function regulator activity	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0005667	transcription regulator complex	No
GO:0046483	heterocycle metabolic process	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0006950	response to stress	No
GO:0006974	cellular response to DNA damage stimulus	No
GO:0140677	molecular function activator activity	No
GO:0050896	response to stimulus	No
GO:0090304	nucleic acid metabolic process	No
GO:0044237	cellular metabolic process	No
GO:0051716	cellular response to stimulus	No
GO:0009987	cellular process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 62	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3215.t1 MASATSRPLEYLEGLPGTTFYKLYQQPSTALAIFRRMLPDLAKCFVMALLYLKDPLPTADLEVWVNAESKKERDN ALSILGRLHILSTTLTGENVRAYMVTNPFAASLRQALMGAEDSHSFGVFSQAPEQTPTSIADLDEYARRQWEGVM GYMVGTSALMSGQRDTVNLSKGVKQLLQAGHLVEIRGNRVDITKDGFGFVLQDVNTQVWHILILYVESAEAIGMD SVEVLSFLFLLSSLELGSSYDKSHMTPNQLRTLADLADFGIVYQEDADATRFYPTRLATTLTSDSSALSNPVTGS LTGPVGPSGGSSSGFIIIETNYRLYAYTSSPLQISLISLFTNLKYRFPNLVTGKITRQSVRRAIEMGITADQIIS YLLSHAHPQLRKHSAAQSNGKGVPASVLPPTVTDQIRLWQLERDRLRATAGFLFKDFTSLTEYQAPCQYAAEIGV LVWKSDRKRMFFVTRHEQVAAFLRSQKVGGK*
Coding	>Pro_DTO377G3_2\|g3215.t1 ATGGCGAGTGCAACATCCCGTCCTCTGGAGTACCTGGAGGGACTCCCCGGGACGACTTTCTATAAGCTATACCAA CAACCATCCACAGCCCTTGCGATCTTCCGGCGCATGCTGCCCGATCTGGCAAAATGCTTTGTGATGGCTCTACTC TATCTGAAAGACCCTCTCCCAACTGCTGATCTGGAAGTTTGGGTCAACGCAGAGAGCAAGAAGGAACGAGATAAT GCGCTTTCAATATTGGGTCGACTTCACATTCTTTCTACGACCCTCACAGGTGAAAACGTCCGTGCGTACATGGTC ACCAACCCGTTCGCTGCTTCGCTTCGACAAGCTCTGATGGGTGCCGAGGACTCTCATTCTTTCGGTGTATTCTCC CAAGCTCCAGAACAAACCCCAACCTCGATTGCCGATTTGGATGAATATGCTAGACGACAGTGGGAAGGTGTTATG GGATACATGGTTGGAACGAGTGCCTTGATGAGTGGACAGCGTGACACGGTCAATTTGAGCAAGGGTGTCAAACAG CTTCTCCAAGCGGGACACTTGGTTGAGATCCGAGGTAACCGTGTCGATATCACCAAAGACGGGTTCGGATTTGTG CTTCAGGATGTGAATACCCAGGTCTGGCATATCTTGATTCTGTATGTCGAGAGCGCCGAGGCCATCGGCATGGAT AGCGTCGAGGTTCTCTCGTTCCTATTCCTCCTGAGCAGTCTAGAACTCGGATCTTCTTACGACAAGAGCCACATG ACACCCAACCAACTTCGCACTCTCGCGGACCTGGCTGATTTTGGTATTGTCTACCAGGAAGATGCCGACGCAACA CGCTTTTATCCCACCCGTCTGGCAACTACACTTACATCCGACTCGAGCGCTCTGAGCAATCCTGTCACAGGATCC CTCACTGGGCCAGTGGGGCCGTCTGGTGGTTCTAGCTCCGGTTTCATCATCATCGAAACTAACTATCGGCTCTAC GCCTACACCTCATCACCCCTACAAATATCTCTCATCTCCCTTTTCACAAACCTCAAATACCGCTTCCCCAATCTG GTCACTGGCAAAATCACCAGGCAGTCTGTCCGCCGAGCAATCGAGATGGGAATCACGGCCGATCAAATTATCTCT TACCTATTATCGCACGCGCACCCACAGCTGCGGAAACACAGCGCTGCTCAATCCAACGGCAAGGGTGTCCCGGCA TCTGTGCTCCCGCCTACTGTGACAGATCAGATCAGATTATGGCAGTTGGAGCGGGACCGTCTCCGGGCTACGGCG GGCTTTTTGTTCAAGGATTTCACCAGCTTGACTGAATACCAGGCTCCCTGCCAGTATGCCGCGGAGATTGGCGTG CTGGTTTGGAAGTCAGATCGGAAGCGCATGTTTTTTGTCACAAGACATGAGCAGGTGGCTGCATTTTTGCGGAGT CAAAAGGTAGGCGGGAAGTAA
Transcript	>Pro_DTO377G3_2\|g3215.t1 ATGGCGAGTGCAACATCCCGTCCTCTGGAGTACCTGGAGGGACTCCCCGGGACGACTTTCTATAAGCTATACCAA CAACCATCCACAGCCCTTGCGATCTTCCGGCGCATGCTGCCCGATCTGGCAAAATGCTTTGTGATGGCTCTACTC TATCTGAAAGACCCTCTCCCAACTGCTGATCTGGAAGTTTGGGTCAACGCAGAGAGCAAGAAGGAACGAGATAAT GCGCTTTCAATATTGGGTCGACTTCACATTCTTTCTACGACCCTCACAGGTGAAAACGTCCGTGCGTACATGGTC ACCAACCCGTTCGCTGCTTCGCTTCGACAAGCTCTGATGGGTGCCGAGGACTCTCATTCTTTCGGTGTATTCTCC CAAGCTCCAGAACAAACCCCAACCTCGATTGCCGATTTGGATGAATATGCTAGACGACAGTGGGAAGGTGTTATG GGATACATGGTTGGAACGAGTGCCTTGATGAGTGGACAGCGTGACACGGTCAATTTGAGCAAGGGTGTCAAACAG CTTCTCCAAGCGGGACACTTGGTTGAGATCCGAGGTAACCGTGTCGATATCACCAAAGACGGGTTCGGATTTGTG CTTCAGGATGTGAATACCCAGGTCTGGCATATCTTGATTCTGTATGTCGAGAGCGCCGAGGCCATCGGCATGGAT AGCGTCGAGGTTCTCTCGTTCCTATTCCTCCTGAGCAGTCTAGAACTCGGATCTTCTTACGACAAGAGCCACATG ACACCCAACCAACTTCGCACTCTCGCGGACCTGGCTGATTTTGGTATTGTCTACCAGGAAGATGCCGACGCAACA CGCTTTTATCCCACCCGTCTGGCAACTACACTTACATCCGACTCGAGCGCTCTGAGCAATCCTGTCACAGGATCC CTCACTGGGCCAGTGGGGCCGTCTGGTGGTTCTAGCTCCGGTTTCATCATCATCGAAACTAACTATCGGCTCTAC GCCTACACCTCATCACCCCTACAAATATCTCTCATCTCCCTTTTCACAAACCTCAAATACCGCTTCCCCAATCTG GTCACTGGCAAAATCACCAGGCAGTCTGTCCGCCGAGCAATCGAGATGGGAATCACGGCCGATCAAATTATCTCT TACCTATTATCGCACGCGCACCCACAGCTGCGGAAACACAGCGCTGCTCAATCCAACGGCAAGGGTGTCCCGGCA TCTGTGCTCCCGCCTACTGTGACAGATCAGATCAGATTATGGCAGTTGGAGCGGGACCGTCTCCGGGCTACGGCG GGCTTTTTGTTCAAGGATTTCACCAGCTTGACTGAATACCAGGCTCCCTGCCAGTATGCCGCGGAGATTGGCGTG CTGGTTTGGAAGTCAGATCGGAAGCGCATGTTTTTTGTCACAAGACATGAGCAGGTGGCTGCATTTTTGCGGAGT CAAAAGGTAGGCGGGAAGTAA
Gene	>Pro_DTO377G3_2\|g3215.t1 ATGGCGAGTGCAACATCCCGTCCTCTGGAGTACCTGGAGGGACTCCCCGGGACGACTTTCTATAAGCTATACCAA CAACCATCCACAGCCCTTGCGATCTTCCGGCGCATGCTGCCCGATCTGGGTACATTAAGCTTACTCACACGGAAG GGAACGTTGTGCTAACACTGAATATAGCAAAATGCTTTGTGATGGCTCTACTCTATCTGAAAGACCCTCTCCCAA CTGCTGATCTGGAAGTTTGGGTCAACGCAGAGAGCAAGAAGTGAGTGGCTTATCTGACAGGTCTTGCTCTAGCCA TTACTGACAGTGTTCACACAAGGGAACGAGATAATGCGCTTTCAATATTGGGTCGACTTCACATTCTTTCTACGA CCCTCACAGGTGAAAACGTCCGTGCGTACATGGTCACCAACCCGTTCGCTGCTTCGCTTCGACAAGCTCTGATGG GTGCCGAGGACTCTCATTCTTTCGGTGTATTCTCCCAAGCTCCAGAACAAACCCCAACCTCGATTGCCGATTTGG ATGAATATGCTAGACGACAGTGGGAAGGTGTTATGGGATACATGGTTGGAACGAGTGCCTTGATGAGTGGACAGC GTGACACGGTCAATTTGAGCAAGGGTGTCAAACAGCTTCTCCAAGCGGGACACTTGGTTGAGATCCGAGGTAACC GTGTCGATATCACCAAAGACGGGTTCGGATTTGTGCTTCAGGATGTGAATACCCAGGTCTGGCATATCTTGATTC TGTATGTCGAGAGCGCCGAGGCCATCGGCATGGATAGCGTCGAGGTTCTCTCGTTCCTATTCCTCCTGAGCAGTC TAGAACTCGGATCTTCTTACGACAAGAGCCACATGACACCCAACCAACTTCGCACTCTCGCGGACCTGGCTGATT TTGGTATTGTCTACCAGGAAGATGCCGACGCAACACGCTTTTATCCCACCCGTCTGGCAACTACACTTACATCCG ACTCGAGCGCTCTGAGCAATCCTGTCACAGGATCCCTCACTGGGCCAGTGGGGCCGTCTGGTGGTTCTAGCTCCG GTTTCATCATCATCGAAACTAACTATCGGCTCTACGCCTACACCTCATCACCCCTACAAATATCTCTCATCTCCC TTTTCACAAACCTCAAATACCGCTTCCCCAATCTGGTCACTGGCAAAATCACCAGGCAGTCTGTCCGCCGAGCAA TCGAGATGGGAATCACGGCCGATCAAATTATCTCTTACCTATTATCGCACGCGCACCCACAGCTGCGGAAACACA GCGCTGCTCAATCCAACGGCAAGGGTGTCCCGGCATCTGTGCTCCCGCCTACTGTGACAGATCAGATCAGATTAT GGCAGTTGGAGCGGGACCGTCTCCGGGCTACGGCGGGCTTTTTGTTCAAGGATTTCACCAGCTTGACTGAATACC AGGCTCCCTGCCAGTATGCCGCGGAGATTGGCGTGCTGGTTTGGAAGTCAGATCGGAAGCGCATGTTTTTTGTCA CAAGACATGAGCAGGTGGCTGCATTTTTGCGGAGTCAAAAGGTAGGCGGGAAGTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences