Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3213.t1
Gene name
Locationscaffold_04:985687..986629
Strand-
Gene length (bp)942
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 55 77 22
3 87 109 22
4 129 151 22
5 166 183 17
6 204 221 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3213.t1
MSSLSNSSPGNWITGSYTGDSIGVRITIATFISVAWYNVIELVVLIFLTFKRYEGAYFWSMLIASVGILPYSVGY
LLKFFNLTSATWVPVTLLTVGWWAMVTGQSFVLYSRLHLVIQNMRVLRMVKTMIITNIFLLHVPTTVLTYAANFS
SSAASVAGYDVMEKLQLTGFCVQEVIISGLYMWETNRMLRLNQDHISRKTILQLLAVNVSCILMDIALMIIEFRN
FYIYQTTLKATLYSIKLKLEIAVLGKLVNIAHQHMWRPSSFNAAGGQYPSFVDPCHALHDFSHADSSATSSASKG
RASGTEAIDSDVR*
Coding >Pro_DTO377G3_2|g3213.t1
ATGTCCTCTCTCAGCAACTCCAGTCCAGGGAACTGGATCACTGGCAGTTATACAGGCGACAGTATTGGCGTCCGT
ATCACCATCGCAACATTCATCAGCGTCGCATGGTACAACGTGATTGAGCTAGTCGTGCTCATTTTCCTAACCTTC
AAACGCTATGAAGGCGCCTATTTTTGGAGCATGCTGATAGCCAGCGTTGGAATCCTACCATATTCGGTCGGCTAC
CTGCTCAAATTCTTTAATCTGACATCTGCCACTTGGGTGCCCGTCACGCTCTTAACAGTCGGTTGGTGGGCCATG
GTAACCGGCCAATCATTCGTGCTGTATTCGCGCCTCCATCTGGTGATTCAGAACATGCGCGTGCTGCGTATGGTG
AAAACCATGATCATCACGAATATTTTCCTGCTGCACGTGCCCACAACCGTCCTCACGTACGCGGCCAACTTCTCC
AGTTCTGCGGCCTCGGTTGCCGGGTACGATGTCATGGAGAAGTTGCAGCTGACGGGCTTCTGTGTGCAGGAGGTT
ATCATATCTGGGTTGTACATGTGGGAGACGAATCGCATGCTGCGCTTAAATCAGGACCATATCAGTCGTAAGACT
ATCCTGCAGCTGCTCGCCGTCAACGTATCTTGTATCCTGATGGATATCGCCTTGATGATTATCGAGTTTAGGAAC
TTCTATATCTATCAAACGACCCTCAAAGCCACACTTTACAGCATCAAGCTAAAACTCGAAATTGCGGTCCTCGGC
AAACTGGTCAATATCGCTCACCAGCATATGTGGAGACCGTCGTCTTTCAACGCTGCCGGTGGGCAGTACCCATCT
TTTGTTGACCCGTGCCATGCCTTGCACGATTTCAGCCATGCCGACTCTTCGGCTACCAGCTCGGCATCCAAAGGC
CGTGCGTCTGGAACTGAGGCCATTGACAGCGACGTTAGATGA
Transcript >Pro_DTO377G3_2|g3213.t1
ATGTCCTCTCTCAGCAACTCCAGTCCAGGGAACTGGATCACTGGCAGTTATACAGGCGACAGTATTGGCGTCCGT
ATCACCATCGCAACATTCATCAGCGTCGCATGGTACAACGTGATTGAGCTAGTCGTGCTCATTTTCCTAACCTTC
AAACGCTATGAAGGCGCCTATTTTTGGAGCATGCTGATAGCCAGCGTTGGAATCCTACCATATTCGGTCGGCTAC
CTGCTCAAATTCTTTAATCTGACATCTGCCACTTGGGTGCCCGTCACGCTCTTAACAGTCGGTTGGTGGGCCATG
GTAACCGGCCAATCATTCGTGCTGTATTCGCGCCTCCATCTGGTGATTCAGAACATGCGCGTGCTGCGTATGGTG
AAAACCATGATCATCACGAATATTTTCCTGCTGCACGTGCCCACAACCGTCCTCACGTACGCGGCCAACTTCTCC
AGTTCTGCGGCCTCGGTTGCCGGGTACGATGTCATGGAGAAGTTGCAGCTGACGGGCTTCTGTGTGCAGGAGGTT
ATCATATCTGGGTTGTACATGTGGGAGACGAATCGCATGCTGCGCTTAAATCAGGACCATATCAGTCGTAAGACT
ATCCTGCAGCTGCTCGCCGTCAACGTATCTTGTATCCTGATGGATATCGCCTTGATGATTATCGAGTTTAGGAAC
TTCTATATCTATCAAACGACCCTCAAAGCCACACTTTACAGCATCAAGCTAAAACTCGAAATTGCGGTCCTCGGC
AAACTGGTCAATATCGCTCACCAGCATATGTGGAGACCGTCGTCTTTCAACGCTGCCGGTGGGCAGTACCCATCT
TTTGTTGACCCGTGCCATGCCTTGCACGATTTCAGCCATGCCGACTCTTCGGCTACCAGCTCGGCATCCAAAGGC
CGTGCGTCTGGAACTGAGGCCATTGACAGCGACGTTAGATGA
Gene >Pro_DTO377G3_2|g3213.t1
ATGTCCTCTCTCAGCAACTCCAGTCCAGGGAACTGGATCACTGGCAGTTATACAGGCGACAGTATTGGCGTCCGT
ATCACCATCGCAACATTCATCAGCGTCGCATGGTACAACGTGATTGAGCTAGTCGTGCTCATTTTCCTAACCTTC
AAACGCTATGAAGGCGCCTATTTTTGGAGCATGCTGATAGCCAGCGTTGGAATCCTACCATATTCGGTCGGCTAC
CTGCTCAAATTCTTTAATCTGACATCTGCCACTTGGGTGCCCGTCACGCTCTTAACAGTCGGTTGGTGGGCCATG
GTAACCGGCCAATCATTCGTGCTGTATTCGCGCCTCCATCTGGTGATTCAGAACATGCGCGTGCTGCGTATGGTG
AAAACCATGATCATCACGAATATTTTCCTGCTGCACGTGCCCACAACCGTCCTCACGTACGCGGCCAACTTCTCC
AGTTCTGCGGCCTCGGTTGCCGGGTACGATGTCATGGAGAAGTTGCAGCTGACGGGCTTCTGTGTGCAGGAGGTT
ATCATATCTGGGTTGTACATGTGGGAGACGAATCGCATGCTGCGCTTAAATCAGGACCATATCAGTCGTAAGACT
ATCCTGCAGCTGCTCGCCGTCAACGTATCTTGTATCCTGATGGATATCGCCTTGATGATTATCGAGTTTAGGAAC
TTCTATATCTATCAAACGACCCTCAAAGCCACACTTTACAGCATCAAGCTAAAACTCGAAATTGCGGTCCTCGGC
AAACTGGTCAATATCGCTCACCAGCATATGTGGAGACCGTCGTCTTTCAACGCTGCCGGTGGGCAGTACCCATCT
TTTGTTGACCCGTGCCATGCCTTGCACGATTTCAGCCATGCCGACTCTTCGGCTACCAGCTCGGCATCCAAAGGC
CGTGCGTCTGGAACTGAGGCCATTGACAGCGACGTTAGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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