Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3204.t1
Gene name
Locationscaffold_04:963563..964818
Strand+
Gene length (bp)1255
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13902 R3H-assoc R3H-associated N-terminal domain 1.0E-22 97 192

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3204.t1
MAIHPRLRPEGSQGHLSPQQAIAISAWTEQHAAASLRDMTLSDSAPAATTPSTPTPTRSGPRGVTVSLSIPLDDD
EAIPSQRVKAESRPPTVSFRRREPLRRDGLKTREALLKGKDGSRRRQRWENDRLLHNPWAQPPSSKDWDVQPTYP
RHDPMPYYLAPLWDVHYSHVVDHQSAARAAERANEKHQIPKELRLKLKHARAAHGMLRDLEEEVRTFIQKWNERE
LLLEKEGLRDAPEYSTSDDSEDEIVFVGRNGQMHDSPERKERLRLLRGEISSHSERDGEKMVLETLADDRAAGFG
RWLVHSIASYYGLHTWSITVEDRREAYVGFRSPVPGSRAGLVSHPACHSEALIKPGEELPRPLYAQV*
Coding >Pro_DTO377G3_2|g3204.t1
ATGGCTATCCATCCACGCCTGCGACCAGAGGGTTCCCAGGGCCACCTGTCGCCGCAACAAGCCATAGCCATCTCC
GCATGGACAGAGCAACATGCAGCAGCGTCCCTGCGGGATATGACCCTATCGGACTCAGCCCCTGCAGCGACAACG
CCGTCTACACCGACTCCGACGCGTTCGGGTCCGCGCGGAGTCACCGTCTCGCTGTCGATCCCTCTCGACGACGAC
GAAGCGATCCCGTCCCAACGAGTCAAGGCCGAGTCCCGCCCTCCGACAGTCAGCTTCCGACGTCGGGAGCCTCTG
CGCCGGGATGGCCTCAAGACCCGAGAGGCTCTACTCAAGGGTAAAGATGGCAGCCGTCGGAGACAGCGCTGGGAG
AACGATCGTCTCTTGCACAACCCCTGGGCGCAACCGCCCTCTTCAAAGGACTGGGATGTCCAGCCTACCTATCCT
CGGCATGACCCGATGCCTTATTATCTTGCGCCCCTGTGGGACGTTCACTATTCCCATGTGGTGGATCACCAGTCG
GCCGCGAGGGCTGCTGAGAGGGCCAATGAGAAGCATCAAATTCCGAAGGAACTGAGGTTAAAGCTGAAGCATGCG
CGTGCCGCGCATGGCATGCTCCGAGATCTGGAAGAGGAGGTCCGTACGTTTATTCAAAAGTGGAATGAAAGGGAG
CTTCTACTTGAGAAAGAGGGCTTGCGGGATGCTCCTGAGTACTCGACCAGTGATGATTCGGAAGATGAGATCGTC
TTTGTCGGTCGGAATGGGCAGATGCACGACTCGCCTGAGCGAAAGGAGAGACTCCGCTTGCTCCGAGGGGAGATC
AGCTCTCACAGCGAGCGAGACGGTGAGAAGATGGTGCTCGAGACTCTGGCTGATGATCGTGCTGCTGGATTCGGT
CGCTGGTTAGTCCACTCCATCGCATCCTACTATGGATTGCACACTTGGTCCATCACAGTAGAAGACCGACGAGAA
GCCTATGTGGGCTTCCGATCCCCGGTTCCGGGAAGCCGCGCCGGGCTCGTTTCCCACCCAGCTTGCCATTCAGAG
GCCCTGATCAAGCCCGGCGAGGAGCTCCCTCGGCCTCTCTATGCTCAAGTGTAA
Transcript >Pro_DTO377G3_2|g3204.t1
ATGGCTATCCATCCACGCCTGCGACCAGAGGGTTCCCAGGGCCACCTGTCGCCGCAACAAGCCATAGCCATCTCC
GCATGGACAGAGCAACATGCAGCAGCGTCCCTGCGGGATATGACCCTATCGGACTCAGCCCCTGCAGCGACAACG
CCGTCTACACCGACTCCGACGCGTTCGGGTCCGCGCGGAGTCACCGTCTCGCTGTCGATCCCTCTCGACGACGAC
GAAGCGATCCCGTCCCAACGAGTCAAGGCCGAGTCCCGCCCTCCGACAGTCAGCTTCCGACGTCGGGAGCCTCTG
CGCCGGGATGGCCTCAAGACCCGAGAGGCTCTACTCAAGGGTAAAGATGGCAGCCGTCGGAGACAGCGCTGGGAG
AACGATCGTCTCTTGCACAACCCCTGGGCGCAACCGCCCTCTTCAAAGGACTGGGATGTCCAGCCTACCTATCCT
CGGCATGACCCGATGCCTTATTATCTTGCGCCCCTGTGGGACGTTCACTATTCCCATGTGGTGGATCACCAGTCG
GCCGCGAGGGCTGCTGAGAGGGCCAATGAGAAGCATCAAATTCCGAAGGAACTGAGGTTAAAGCTGAAGCATGCG
CGTGCCGCGCATGGCATGCTCCGAGATCTGGAAGAGGAGGTCCGTACGTTTATTCAAAAGTGGAATGAAAGGGAG
CTTCTACTTGAGAAAGAGGGCTTGCGGGATGCTCCTGAGTACTCGACCAGTGATGATTCGGAAGATGAGATCGTC
TTTGTCGGTCGGAATGGGCAGATGCACGACTCGCCTGAGCGAAAGGAGAGACTCCGCTTGCTCCGAGGGGAGATC
AGCTCTCACAGCGAGCGAGACGGTGAGAAGATGGTGCTCGAGACTCTGGCTGATGATCGTGCTGCTGGATTCGGT
CGCTGGTTAGTCCACTCCATCGCATCCTACTATGGATTGCACACTTGGTCCATCACAGTAGAAGACCGACGAGAA
GCCTATGTGGGCTTCCGATCCCCGGTTCCGGGAAGCCGCGCCGGGCTCGTTTCCCACCCAGCTTGCCATTCAGAG
GCCCTGATCAAGCCCGGCGAGGAGCTCCCTCGGCCTCTCTATGCTCAAGTGTAA
Gene >Pro_DTO377G3_2|g3204.t1
ATGGCTATCCATCCACGCCTGCGACCAGAGGGTTCCCAGGGCCACCTGTCGCCGCAACAAGCCATAGCCATCTCC
GCATGGACAGAGCAACATGCAGCAGCGTCCCTGCGGGATATGACCCTATCGGACTCAGCCCCTGCAGCGACAACG
CCGTCTACACCGACTCCGACGCGTTCGGGTCCGCGCGGAGTCACCGTCTCGCTGTCGATCCCTCTCGACGACGAC
GAAGCGATCCCGTCCCAACGAGTCAAGGCCGAGTCCCGCCCTCCGACAGTCAGCTTCCGACGTCGGGAGCCTCTG
CGCCGGGATGGCCTCAAGACCCGAGAGGCTCTACTCAAGGGTAAAGATGGCAGCCGTCGGAGACAGCGCTGGGAG
AACGGTACGTTGTATATGCACTAGATAGGTCGCGGCGAATGCCGACTTGTACCTTTTTGCCTTTGGTGCAGGTTT
GGCAGGCAAATGCTGACTAGGCACTAAGATCGTCTCTTGCACAACCCCTGGGCGCAACCGCCCTCTTCAAAGGAC
TGGGATGTCCAGCCTACCTATCCTCGGCATGACCCGATGCCTTATTATCTTGCGCCCCTGTGGGACGTTCACTAT
TCCCATGTGGTGGATCACCAGTCGGCCGCGAGGGCTGCTGAGAGGGCCAATGAGAAGCATCAAATTCCGAAGGAA
CTGAGGTTAAAGCTGAAGCATGCGCGTGCCGCGCATGGCATGCTCCGAGATCTGGAAGAGGAGGTCCGTACGTTT
ATTCAAAAGTGGAATGAAAGGGAGCTTCTACTTGAGAAAGAGGGCTTGCGGGATGCTCCTGAGTACTCGACCAGT
GATGATTCGGAAGATGAGATCGTCTTTGTCGGTCGGAATGGGCAGATGCACGACTCGCCTGAGCGAAAGGAGAGA
CTCCGCTTGCTCCGAGGGGAGATCAGCTCTCACAGCGAGCGAGACGGTGAGAAGATGGTGCTCGAGACTCTGGCT
GATGATCGTGCTGCTGGATTCGGGTATGTTTTAAGCCTTCCCTCCACCTTATTCCAGTCCGCTGACCCTTCTCAG
TCGCTGGTTAGTCCACTCCATCGCATCCTACTATGGATTGCACACTTGGTCCATCACAGTAGAAGACCGACGAGA
AGCCTATGTGGGCTTCCGATCCCCGGTTCCGGGAAGCCGCGCCGGGCTCGTTTCCCACCCAGCTTGCCATTCAGA
GGCCCTGATCAAGCCCGGCGAGGAGCTCCCTCGGCCTCTCTATGCTCAAGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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