© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3184.t1 |
| Gene name | |
| Location | scaffold_04:914844..916306 |
| Strand | + |
| Gene length (bp) | 1462 |
| Transcript length (bp) | 1341 |
| Coding sequence length (bp) | 1341 |
| Protein length (aa) | 447 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 5.8E-24 | 74 | 406 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 60 | 82 | 22 |
| 2 | 97 | 119 | 22 |
| 3 | 132 | 151 | 19 |
| 4 | 161 | 183 | 22 |
| 5 | 188 | 210 | 22 |
| 6 | 220 | 237 | 17 |
| 7 | 262 | 284 | 22 |
| 8 | 299 | 318 | 19 |
| 9 | 325 | 347 | 22 |
| 10 | 357 | 379 | 22 |
| 11 | 391 | 413 | 22 |
| 12 | 423 | 445 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3184.t1 MGQRNIPQSSAAGICSTTAGSSYTTSATTYNEESPIFVQQDPRQQDEYRKAENNEIPNGGLVAWTQVLTGHLVVF NVWGYITSYGFFQEYYVKTLDVSPANASWIGAVQMFLVHFLATFSGRAMDAGYLRQCITLGCFFQVAGALATSFG TRLWHFWLAQGVVSGIGHGLVFSPMISLYATYFNSKRVMAVSLASCGAATGGMVFPVVAYKCLNNIGFAWTVRIM AAIILFNSIIIIKFTRARIIPRSPPPWVDFSAFRERPYLLFSIGSFLIFEGIYFAYIYLRQYAQAHTGFTASDSL LLLILMNGVGVASRIASAFVADRWLGAVRTCIAVSIPCGIAILGWIGVHTRVGMFIWATVYGLLVNCAQSQLPAA NAYFGSKDPEKSGTRVGMITTINSIPLLTGPYIAGQLIALRGGDYLYAQLFGGICILTGALFVVGSHLSGA* |
| Coding | >Pro_DTO377G3_2|g3184.t1 ATGGGCCAGCGAAACATACCACAGAGCAGTGCGGCCGGAATATGCTCGACGACCGCTGGTTCGTCCTACACAACG TCGGCCACTACCTATAACGAAGAGTCCCCGATATTTGTTCAACAAGATCCTCGCCAACAAGATGAATACCGCAAA GCTGAGAACAATGAGATCCCCAATGGGGGTCTCGTAGCCTGGACCCAGGTTCTGACTGGACATCTGGTTGTGTTC AATGTATGGGGCTACATTACATCGTACGGTTTCTTCCAAGAATACTATGTCAAAACTCTCGATGTCAGCCCAGCA AATGCATCTTGGATCGGAGCGGTGCAGATGTTCTTAGTCCATTTCCTGGCCACTTTCTCAGGCCGAGCGATGGAC GCAGGCTACCTGAGACAATGCATCACCCTTGGATGTTTCTTCCAGGTTGCCGGGGCATTGGCGACCTCATTCGGC ACAAGGTTATGGCATTTTTGGTTAGCGCAAGGCGTTGTCAGTGGAATTGGCCACGGACTCGTCTTCAGCCCCATG ATCTCGCTGTATGCGACATACTTCAACTCCAAGCGAGTGATGGCCGTCTCGCTGGCATCTTGCGGGGCAGCGACT GGGGGGATGGTTTTCCCAGTGGTCGCGTATAAGTGTCTCAACAATATCGGCTTCGCATGGACTGTCCGGATTATG GCAGCCATTATCCTATTCAACAGCATTATAATTATCAAGTTTACCAGAGCTCGGATTATACCTCGGAGTCCTCCT CCCTGGGTTGATTTCAGTGCATTCCGTGAACGCCCTTACCTCCTTTTTTCGATCGGCTCATTCCTGATCTTCGAG GGTATTTACTTTGCCTACATTTATCTCAGACAATATGCCCAGGCCCATACAGGTTTCACCGCATCTGACTCACTT CTCCTTTTAATCCTGATGAACGGCGTTGGTGTTGCGTCTCGAATTGCATCCGCATTTGTGGCAGACCGGTGGCTG GGTGCGGTAAGGACTTGCATTGCAGTCTCCATCCCTTGCGGTATCGCCATTCTAGGGTGGATTGGTGTACACACC CGCGTTGGCATGTTCATCTGGGCTACAGTCTATGGGTTACTGGTTAATTGTGCGCAGAGTCAATTGCCCGCTGCC AATGCATACTTTGGATCCAAAGACCCGGAAAAATCAGGCACACGTGTTGGGATGATCACCACGATCAATAGCATT CCACTACTGACTGGACCGTACATAGCAGGGCAGCTGATCGCGTTACGGGGAGGCGATTACCTGTACGCGCAGTTG TTCGGCGGTATTTGTATCTTGACTGGAGCGTTGTTTGTAGTCGGTTCTCACCTTTCGGGAGCTTGA |
| Transcript | >Pro_DTO377G3_2|g3184.t1 ATGGGCCAGCGAAACATACCACAGAGCAGTGCGGCCGGAATATGCTCGACGACCGCTGGTTCGTCCTACACAACG TCGGCCACTACCTATAACGAAGAGTCCCCGATATTTGTTCAACAAGATCCTCGCCAACAAGATGAATACCGCAAA GCTGAGAACAATGAGATCCCCAATGGGGGTCTCGTAGCCTGGACCCAGGTTCTGACTGGACATCTGGTTGTGTTC AATGTATGGGGCTACATTACATCGTACGGTTTCTTCCAAGAATACTATGTCAAAACTCTCGATGTCAGCCCAGCA AATGCATCTTGGATCGGAGCGGTGCAGATGTTCTTAGTCCATTTCCTGGCCACTTTCTCAGGCCGAGCGATGGAC GCAGGCTACCTGAGACAATGCATCACCCTTGGATGTTTCTTCCAGGTTGCCGGGGCATTGGCGACCTCATTCGGC ACAAGGTTATGGCATTTTTGGTTAGCGCAAGGCGTTGTCAGTGGAATTGGCCACGGACTCGTCTTCAGCCCCATG ATCTCGCTGTATGCGACATACTTCAACTCCAAGCGAGTGATGGCCGTCTCGCTGGCATCTTGCGGGGCAGCGACT GGGGGGATGGTTTTCCCAGTGGTCGCGTATAAGTGTCTCAACAATATCGGCTTCGCATGGACTGTCCGGATTATG GCAGCCATTATCCTATTCAACAGCATTATAATTATCAAGTTTACCAGAGCTCGGATTATACCTCGGAGTCCTCCT CCCTGGGTTGATTTCAGTGCATTCCGTGAACGCCCTTACCTCCTTTTTTCGATCGGCTCATTCCTGATCTTCGAG GGTATTTACTTTGCCTACATTTATCTCAGACAATATGCCCAGGCCCATACAGGTTTCACCGCATCTGACTCACTT CTCCTTTTAATCCTGATGAACGGCGTTGGTGTTGCGTCTCGAATTGCATCCGCATTTGTGGCAGACCGGTGGCTG GGTGCGGTAAGGACTTGCATTGCAGTCTCCATCCCTTGCGGTATCGCCATTCTAGGGTGGATTGGTGTACACACC CGCGTTGGCATGTTCATCTGGGCTACAGTCTATGGGTTACTGGTTAATTGTGCGCAGAGTCAATTGCCCGCTGCC AATGCATACTTTGGATCCAAAGACCCGGAAAAATCAGGCACACGTGTTGGGATGATCACCACGATCAATAGCATT CCACTACTGACTGGACCGTACATAGCAGGGCAGCTGATCGCGTTACGGGGAGGCGATTACCTGTACGCGCAGTTG TTCGGCGGTATTTGTATCTTGACTGGAGCGTTGTTTGTAGTCGGTTCTCACCTTTCGGGAGCTTGA |
| Gene | >Pro_DTO377G3_2|g3184.t1 ATGGGCCAGCGAAACATACCACAGAGCAGTGCGGCCGGAATATGCTCGACGACCGCTGGTTCGTCCTACACAACG TCGGCCACTACCTATAACGAAGAGTCCCCGATATTTGTTCAACAAGATCCTCGCCAACAAGATGAATACCGCAAA GCTGAGAACAATGAGATCCCCAATGGGGGTCTCGTAGCCTGGACCCAGGTTCTGACTGGACATCTGGTTGTGTTC AATGTATGGGGCTACATTACATCGTAAGGGAGCCCCGTCACATAAGATATTAATTCAAACCATTGACGCAATCTA GGTACGGTTTCTTCCAAGAATACTATGTCAAAACTCTCGATGTCAGCCCAGCAAATGCATCTTGGATCGGAGCGG TGCAGATGTTCTTAGTCCATTTCCTGGCCACTTTCTCAGGCCGAGCGATGGACGCAGGCTACCTGAGACAATGCA TCACCCTTGGATGTTTCTTCCAGGTTGCCGGGGCATTGGCGACCTCATTCGGCACAAGGTTATGGCATTTTTGGT TAGCGCAAGGCGTTGTCAGTGGAATTGGCCACGGACTCGTCTTCAGCCCCATGATCTCGCTGTATGCGACATACT TCAACTCCAAGCGAGTGATGGCCGTCTCGCTGGCATCTTGCGGGGCAGCGACTGGGGGGATGGTTTTCCCAGTGG TCGCGTATAAGTGTCTCAACAATATCGGCTTCGCATGGACTGTCCGGATTATGGCAGCCATTATCCTATTCAACA GCATTATAATTATCAAGTTTACCAGAGCTCGGATTATACCTCGGAGTCCTCCTCCCTGGGTTGATTTCAGTGCAT TCCGTGAACGCCCTTACCTCCTTTTTTCGATCGGCTCATTCCTGATCTTCGAGGGTATTTACTTTGCCTACATTT ATGTAAGTTCTGTCTTGTTTCTCACATTGGTTGGCGGCATAATAGCTAACATACCTAACAACATCTACAGCTCAG ACAATATGCCCAGGCCCATACAGGTTTCACCGCATCTGACTCACTTCTCCTTTTAATCCTGATGAACGGCGTTGG TGTTGCGTCTCGAATTGCATCCGCATTTGTGGCAGACCGGTGGCTGGGTGCGGTAAGGACTTGCATTGCAGTCTC CATCCCTTGCGGTATCGCCATTCTAGGGTGGATTGGTGTACACACCCGCGTTGGCATGTTCATCTGGGCTACAGT CTATGGGTTACTGGTTAATTGTGCGCAGAGTCAATTGCCCGCTGCCAATGCATACTTTGGATCCAAAGACCCGGA AAAATCAGGCACACGTGTTGGGATGATCACCACGATCAATAGCATTCCACTACTGACTGGACCGTACATAGCAGG GCAGCTGATCGCGTTACGGGGAGGCGATTACCTGTACGCGCAGTTGTTCGGCGGTATTTGTATCTTGACTGGAGC GTTGTTTGTAGTCGGTTCTCACCTTTCGGGAGCTTGA |