Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3177.t1
Gene name
Locationscaffold_04:902771..905063
Strand+
Gene length (bp)2292
Transcript length (bp)1752
Coding sequence length (bp)1752
Protein length (aa) 584

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00135 COesterase Carboxylesterase family 8.8E-79 65 562
PF20434 BD-FAE BD-FAE 1.1E-15 149 272
PF07859 Abhydrolase_3 alpha/beta hydrolase fold 5.7E-06 166 262

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.51 0.00 1.07
5d_25C Five days - 25 degrees Celsius 0.72 0.01 1.43
7d_25C Seven days - 25 degrees Celsius 0.63 0.00 1.29
10d_25C Ten days - 25 degrees Celsius 1.00 0.08 1.93
7d_15C Seven days - 15 degrees Celsius 1.64 0.25 3.03
7d_30C Seven days - 30 degrees Celsius 1.70 0.34 3.06

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.669433 no
3d_25C 7d_25C 1.000000 no
3d_25C 7d_15C 0.049004 yes
3d_25C 7d_30C 0.038776 yes
3d_25C 10d_25C 0.284407 no
5d_25C 7d_25C 0.884766 no
5d_25C 7d_15C 0.127752 no
5d_25C 7d_30C 0.094967 no
5d_25C 10d_25C 0.613614 no
7d_25C 7d_15C 0.074263 no
7d_25C 7d_30C 0.054593 no
7d_25C 10d_25C 0.453442 no
7d_15C 7d_30C 0.965373 no
7d_15C 10d_25C 0.370751 no
7d_30C 10d_25C 0.303367 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3177.t1
MRSMTRASTVLSTLFLCIISGTIANSLSSKTTGNTANTPTATLSISNQSLKTIFVGRSLPEFNQDLFLGIKYADE
PIRFTPVELKSDYASKDNDSGHYNLSPEEVVSATSNLVYYNAMEYGYDCPAYGSDTTDMVNSGLITLNEDCFNLN
IIRPNADESNGLLPVVIWIFGGGWAQGATADPRYNMSYIVEQSALNGKPVLGVSINYRLAAFGFLDSEEVEGNTN
LALRDQRTAMRWVKKNIKAFGGDPSKITIWGESAGAYSVGAHLVTNNGDNEGLFRAAIMDSGNAVGPPYNGTEWH
QPMYDRIVERAGCTNSLNTLQCLRELPYAALYSIANEGLEWFATVDGSFITQYPQINYREGTLAQVPILLGTNTD
EGTSFGTTGTNTVEDCINELTTSKRWILNRPQATQLLSYYPNVPAIGCPYGWGNTTWPSLGLMYKRYASIAGDVT
MVAPRRMLAHRMASLHEDVYSYRWDVAALNGSTTIGVQHFAEIPFVFANPVQAITPLGSDPERLKLAQMAARMWT
SFVADLDPNGHGVPDIAKWPKYSSRATNFVFRLPRNECYVEADIYRVDGIDYINSIAR*
Coding >Pro_DTO377G3_2|g3177.t1
ATGCGGTCGATGACAAGAGCCTCGACGGTCCTTTCGACCTTATTCCTCTGTATAATTTCCGGAACAATAGCCAAC
TCTCTCTCATCCAAAACAACGGGTAACACAGCGAATACCCCAACAGCAACCCTATCAATAAGCAATCAAAGCCTA
AAGACCATCTTCGTGGGCCGCTCTCTTCCGGAATTCAACCAAGATCTTTTTCTGGGCATCAAGTATGCCGACGAG
CCAATACGCTTCACACCAGTCGAGCTCAAGAGCGACTATGCATCGAAGGATAATGACTCTGGACATTATAATCTA
TCACCAGAAGAAGTCGTCAGCGCTACTTCTAACCTGGTATACTACAATGCTATGGAGTACGGCTACGACTGTCCC
GCGTATGGATCCGATACCACCGACATGGTCAACAGTGGTCTTATCACTTTGAACGAGGACTGCTTTAACTTAAAT
ATTATCCGACCTAATGCCGACGAGAGTAACGGATTGCTTCCAGTTGTGATCTGGATTTTCGGTGGTGGGTGGGCA
CAGGGCGCTACTGCGGATCCGAGATATAATATGAGCTATATCGTTGAACAGAGCGCATTGAACGGCAAGCCAGTT
CTGGGTGTTTCTATCAACTACCGTCTGGCAGCATTCGGATTCCTTGACTCGGAGGAAGTCGAAGGAAACACCAAT
CTAGCACTGCGTGACCAGCGCACGGCGATGCGCTGGGTGAAGAAGAATATCAAAGCGTTCGGCGGTGATCCGAGC
AAGATCACTATTTGGGGCGAGTCTGCTGGTGCATATAGTGTTGGAGCTCATCTGGTGACCAACAATGGCGATAAC
GAGGGTCTTTTTAGAGCTGCAATCATGGATTCTGGAAATGCTGTCGGGCCCCCATACAACGGAACAGAATGGCAC
CAGCCAATGTACGACCGAATCGTCGAGAGAGCCGGATGCACCAATTCATTGAATACCCTACAATGTCTCCGTGAG
CTGCCATACGCAGCTTTATACAGCATTGCAAACGAGGGTCTAGAATGGTTTGCTACTGTCGACGGCTCATTCATA
ACCCAGTATCCGCAAATCAACTACAGAGAAGGCACATTAGCTCAAGTGCCTATCTTGTTAGGGACAAATACCGAT
GAAGGTACCAGTTTTGGGACGACTGGCACAAACACCGTTGAGGACTGCATCAATGAATTGACTACATCCAAGCGT
TGGATCCTCAACCGTCCCCAAGCTACCCAGCTGCTGTCCTACTACCCCAACGTCCCCGCCATTGGCTGCCCCTAT
GGCTGGGGAAATACCACCTGGCCCTCGCTGGGACTCATGTACAAGCGCTATGCATCCATAGCCGGGGATGTGACC
ATGGTAGCGCCACGGCGCATGTTAGCCCATCGAATGGCCAGCTTGCACGAGGATGTATATTCGTACAGATGGGAT
GTGGCAGCGTTAAATGGCTCAACAACGATTGGGGTGCAACATTTCGCAGAGATCCCTTTCGTCTTTGCAAATCCA
GTGCAGGCCATCACACCGCTAGGGTCCGACCCTGAGCGCTTGAAACTGGCCCAAATGGCAGCGCGGATGTGGACA
TCATTCGTGGCAGACTTAGATCCCAATGGACATGGTGTGCCGGATATTGCCAAATGGCCCAAGTATTCGTCCCGA
GCGACGAACTTTGTTTTCCGCTTACCCCGAAATGAGTGTTATGTCGAGGCTGACATATACCGCGTCGATGGGATT
GATTATATCAACAGCATCGCGCGGTAA
Transcript >Pro_DTO377G3_2|g3177.t1
ATGCGGTCGATGACAAGAGCCTCGACGGTCCTTTCGACCTTATTCCTCTGTATAATTTCCGGAACAATAGCCAAC
TCTCTCTCATCCAAAACAACGGGTAACACAGCGAATACCCCAACAGCAACCCTATCAATAAGCAATCAAAGCCTA
AAGACCATCTTCGTGGGCCGCTCTCTTCCGGAATTCAACCAAGATCTTTTTCTGGGCATCAAGTATGCCGACGAG
CCAATACGCTTCACACCAGTCGAGCTCAAGAGCGACTATGCATCGAAGGATAATGACTCTGGACATTATAATCTA
TCACCAGAAGAAGTCGTCAGCGCTACTTCTAACCTGGTATACTACAATGCTATGGAGTACGGCTACGACTGTCCC
GCGTATGGATCCGATACCACCGACATGGTCAACAGTGGTCTTATCACTTTGAACGAGGACTGCTTTAACTTAAAT
ATTATCCGACCTAATGCCGACGAGAGTAACGGATTGCTTCCAGTTGTGATCTGGATTTTCGGTGGTGGGTGGGCA
CAGGGCGCTACTGCGGATCCGAGATATAATATGAGCTATATCGTTGAACAGAGCGCATTGAACGGCAAGCCAGTT
CTGGGTGTTTCTATCAACTACCGTCTGGCAGCATTCGGATTCCTTGACTCGGAGGAAGTCGAAGGAAACACCAAT
CTAGCACTGCGTGACCAGCGCACGGCGATGCGCTGGGTGAAGAAGAATATCAAAGCGTTCGGCGGTGATCCGAGC
AAGATCACTATTTGGGGCGAGTCTGCTGGTGCATATAGTGTTGGAGCTCATCTGGTGACCAACAATGGCGATAAC
GAGGGTCTTTTTAGAGCTGCAATCATGGATTCTGGAAATGCTGTCGGGCCCCCATACAACGGAACAGAATGGCAC
CAGCCAATGTACGACCGAATCGTCGAGAGAGCCGGATGCACCAATTCATTGAATACCCTACAATGTCTCCGTGAG
CTGCCATACGCAGCTTTATACAGCATTGCAAACGAGGGTCTAGAATGGTTTGCTACTGTCGACGGCTCATTCATA
ACCCAGTATCCGCAAATCAACTACAGAGAAGGCACATTAGCTCAAGTGCCTATCTTGTTAGGGACAAATACCGAT
GAAGGTACCAGTTTTGGGACGACTGGCACAAACACCGTTGAGGACTGCATCAATGAATTGACTACATCCAAGCGT
TGGATCCTCAACCGTCCCCAAGCTACCCAGCTGCTGTCCTACTACCCCAACGTCCCCGCCATTGGCTGCCCCTAT
GGCTGGGGAAATACCACCTGGCCCTCGCTGGGACTCATGTACAAGCGCTATGCATCCATAGCCGGGGATGTGACC
ATGGTAGCGCCACGGCGCATGTTAGCCCATCGAATGGCCAGCTTGCACGAGGATGTATATTCGTACAGATGGGAT
GTGGCAGCGTTAAATGGCTCAACAACGATTGGGGTGCAACATTTCGCAGAGATCCCTTTCGTCTTTGCAAATCCA
GTGCAGGCCATCACACCGCTAGGGTCCGACCCTGAGCGCTTGAAACTGGCCCAAATGGCAGCGCGGATGTGGACA
TCATTCGTGGCAGACTTAGATCCCAATGGACATGGTGTGCCGGATATTGCCAAATGGCCCAAGTATTCGTCCCGA
GCGACGAACTTTGTTTTCCGCTTACCCCGAAATGAGTGTTATGTCGAGGCTGACATATACCGCGTCGATGGGATT
GATTATATCAACAGCATCGCGCGGTAA
Gene >Pro_DTO377G3_2|g3177.t1
ATGCGGTCGATGACAAGAGCCTCGACGGTCCTTTCGACCTTATTCCTCTGTATAATTTCCGGAACAATAGCCAAC
TCTCTCTCATCCAAAACAACGGGTAACACAGCGAATACCCCAACAGCAACCCTATCAATAAGCAATCAAAGCCTA
AAGACCATCTTCGTGGGCCGCTCTCTTCCGGAATTCAACCAAGATCTTTTTCTGGGCATCAAGTATGCCGACGAG
CCAATACGCTTCACACCAGTCGAGCTCAAGAGCGACTATGCATCGAAGGATAATGACTCTGGACATTATAATCTA
TCACCAGAAGAAGTCGTCAGCGCTACTTCTAACCTGGTATACTACAATGCTATGGAGTACGGCTACGACTGTCCC
GCGTATGGATCCGATACCACCGACATGGTCAACAGTGGTCTTATCACTTTGAACGAGGACTGCTTTAACTTAAAT
ATTATCCGACCTAATGCCGACGAGAGTAACGGATTGCTTCCAGTTGTGATCTGGATTTTCGGTGGTGGGTGGGCA
CAGGGCGCTACTGCGGATCCGAGGTATGTTGGTCGAGGAATATAGGGCTGGGTACGAATGTTCATACCTTAGAAA
GGTGGCCGATGGCTGTGGTTAACCTTATGCTACGCTGCCTATAGATATAATATGAGCTATATCGTTGAACAGAGC
GCATTGAACGGCAAGCCAGTTCTGGGTGTTTCTATCAACTACCGTCTGGCAGCATTCGGATTCCTTGACTCGGAG
GAAGTAAGGGTAGTGCCAATATATAGAAACTTGGATACTGAGGATTCTTGAGATTAACTTGGACTCCAGGTCGAA
GGAAACACCAATCTAGCACTGCGTGACCAGCGCACGGCGATGCGCTGGGTGAAGAAGAATATCAAAGCGTTCGGC
GGTGATCCGAGCAAGATCACTATTTGGGGCGAGTCTGCGTGAGTCACTGGAAATATTTTGGTATAACAGATGCTT
AATTTTGAATAAACAGTGGTGCATATAGTGTTGGAGCTCATCTGGTGACCAACAATGGCGATAACGAGGGTCTTT
TTAGAGCTGGTATAGTCCACTGTACTTCGTGCCATTTTACGACACCAGACTAAGGTTCGCCTAGCAATCATGGAT
TCTGGAAATGCTGTCGGGCCCCCATACAACGGAACAGAATGGCACCAGCCAATGTACGACCGAATCGTCGAGAGA
GCCGGGTGAGTCTATATCAAACAAGTCTATATCAAACAAGTCTCTATCAAATGACGCTGAATATACTATATCTAG
ATGCACCAATTCATTGAATACCCTACAATGTCTCCGTGAGCTGCCATACGCAGCTTTATACAGCATTGCAAACGA
GGGTCTAGAATGGTTTGCTACTGTCGACGGCTCATTCATAACCCAGTATCCGCAAATCAACTACAGAGAAGGCAC
ATTAGCTCAAGTGCCTATCTTGTTAGGGACAAATACCGATGAAGGTACCAGTTTTGGGACGACTGGCACAAACAC
CGTTGAGGACTGCATCAATGAATTGACTAGTACGTGTTGTGTATAGCATTTTTAAGTCACATCGTGCTAAGCGAG
TAGCACAGCATCCAAGCGTTGGATCCTCAACCGTCCCCAAGCTACCCAGCTGCTGTCCTACTACCCCAACGTCCC
CGCCATTGGCTGCCCCTATGGCTGGGGAAATACCACCTGGCCCTCGCTGGGACTCATGTACAAGCGCTATGCATC
CATAGCCGGGGATGTGACCATGGTAGCGCCACGGCGCATGTTAGCCCATCGAATGGCCAGCTTGCACGAGGATGT
ATATTCGTACAGATGGGATGTGGCAGCGTTAAATGGCTCAACAACGATTGGGGTGCAACATTTCGCAGAGGTATG
TAGTAACCCACCTAGTCTTAGATACAACCTACCTAGCTCTCTGGTCTGCAAGATAGACTGACGCTTGTATCGGTT
ATACAGATCCCTTTCGTCTTTGCAAATCCAGTGCAGGCCATCACACCGCTAGGGTCCGACCCTGAGCGCTTGAAA
CTGGCCCAAATGGCAGCGCGGATGTGGACATCATTCGTGGCAGACTTAGATCCCAATGGACATGGTGGTTAGTAG
AACACACGTGCGGCTAGAATCTATTGTTTGGCATCTGACTTCTTCTTTCTAGTGCCGGATATTGCCAAATGGCCC
AAGTATTCGTCCCGAGCGACGAACTTTGTTTTCCGCTTACCCCGAAATGAGTGTTATGTCGAGGCTGACATATAC
CGCGTCGATGGGATTGATTATATCAACAGCATCGCGCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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