Fungal Genomics

General Properties

Protein ID	Pro_DTO377G3_2|g3136.t1
Gene name
Location	scaffold_04:799926..801672
Strand	-
Gene length (bp)	1746
Transcript length (bp)	1692
Coding sequence length (bp)	1692
Protein length (aa)	564

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	1.3E-06	145	197
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	6.6E-05	200	276
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	3.9E-09	279	329
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	1.7E-10	333	383
PF00415	RCC1	Regulator of chromosome condensation (RCC1) repeat	3.7E-07	387	440
PF13540	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	2.5E-06	316	344
PF13540	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	2.1E-08	370	398

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID	2
Orthogroup	1278
Change Orthofinder run	2: Penicillium roqueforti - all strains

Species	Protein ID
Penicillium roqueforti DTO002I6	Pro_DTO002I6_2|g172.t1
Penicillium roqueforti DTO003C3	Pro_DTO003C3_2|g5975.t1
Penicillium roqueforti DTO003H1 (CBS 147308)	Pro_DTO003H1_2|g9734.t1
Penicillium roqueforti DTO006G1	Pro_DTO006G1_2|g5137.t1
Penicillium roqueforti DTO006G7	Pro_DTO006G7_3|g8637.t1
Penicillium roqueforti DTO012A1	Pro_DTO012A1_2|g6426.t1
Penicillium roqueforti DTO012A2 (CBS 147309)	Pro_DTO012A2_2|g7774.t1
Penicillium roqueforti DTO012A6 (CBS 147310)	Pro_DTO012A6_2|g2731.t1
Penicillium roqueforti DTO012A7	Pro_DTO012A7_2|g7198.t1
Penicillium roqueforti DTO012A8	Pro_DTO012A8_2|g3816.t1
Penicillium roqueforti DTO012A9	Pro_DTO012A9_2|g3657.t1
Penicillium roqueforti DTO013E5	Pro_DTO013E5_2|g7083.t1
Penicillium roqueforti DTO013F2	Pro_DTO013F2_2|g4498.t1
Penicillium roqueforti DTO013F5 (CBS 147311)	Pro_DTO013F5_2|g4949.t1
Penicillium roqueforti DTO027I6	Pro_DTO027I6_2|g4451.t1
Penicillium roqueforti DTO032C6	Pro_DTO032C6_2|g8113.t1
Penicillium roqueforti DTO039G3	Pro_DTO039G3_2|g4071.t1
Penicillium roqueforti DTO046C5	Pro_DTO046C5_2|g3057.t1
Penicillium roqueforti DTO070G2 (CBS 147317)	Pro_DTO070G2_2|g4209.t1
Penicillium roqueforti DTO081F9 (CBS 147318)	Pro_DTO081F9_2|g3572.t1
Penicillium roqueforti DTO101D6 (CBS 147325)	Pro_DTO101D6_2|g2354.t1
Penicillium roqueforti DTO102I9 (CBS 147326)	Pro_DTO102I9_2|g8589.t1
Penicillium roqueforti DTO126G2 (CBS 147330)	Pro_DTO126G2_2|g5926.t1
Penicillium roqueforti DTO127F7 (CBS 147331)	Pro_DTO127F7_2|g7669.t1
Penicillium roqueforti DTO127F9 (CBS 147332)	Pro_DTO127F9_2|g7642.t1
Penicillium roqueforti DTO130C1 (CBS 147333)	Pro_DTO130C1_2|g6890.t1
Penicillium roqueforti DTO163C3 (CBS 147337)	Pro_DTO163C3_2|g5520.t1
Penicillium roqueforti DTO163F5 (CBS 147338)	Pro_DTO163F5_2|g2323.t1
Penicillium roqueforti DTO163G4 (CBS 147339)	Pro_DTO163G4_2|g8706.t1
Penicillium roqueforti DTO265D5 (CBS 147372)	Pro_DTO265D5_2|g3657.t1
Penicillium roqueforti DTO369A1 (CBS 147354)	Pro_DTO369A1_2|g5396.t1
Penicillium roqueforti DTO375B1 (CBS 147355)	Pro_DTO375B1_2|g7906.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a)	Pro_DTO377G2_2|g8656.t1
Penicillium roqueforti LCP96 04111	Pro_DTO377G3_2|g3136.t1 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2|g3136.t1 MPPKKNTSKPVEASTETVKRSTRLRTSARQITMTKAETPVKESTKAAAKSTTKSIEKPTAKPTAKATAKSTTKST TKPTATSTKSTAKPSKMATSTKLTSATKKRKADEDEEKPREIKRSRVAQPRQPKPKVKVIINEAPKTKLNVFVCG EGSSGELGLGTAKNVIDVKRPRLNKLLSAEEVGVVQVAVGGMHCLALTHDNKIFSWGVNDQGALGRETEWDGGYK DIENDSDSDSDDEDSGLNPRESIPTAIPVTAFPEGTVFVEVAAADSASFALTDDGLVYGWGTFRSNDGILGFDAS SHVQTIPTLISSLKKIKHLTCGANHVLALNDQGRVYSWGSGQQNQLGRRIVERNRLNGLQPREFGLPKNIVHIGS GSYHSFAVHATGKVYAWGLNSFGATALREGAGDDEAAIVHPTLVESLSDKNISQICGGAHHSIAIAGDGECLVWG RLDGFQSGLKIDALSDDAVIKDERDRPRILIAPTPVPGIKAKVVAAASDHSLAIDSDGRAWSWGFSATYQTGQGT QDDIEVATVIDNTATRGKKLNWAGAGGQFSVFTEPASA*
Coding	>Pro_DTO377G3_2|g3136.t1 ATGCCTCCTAAGAAGAACACGTCCAAGCCCGTCGAGGCTTCAACCGAGACGGTAAAGAGAAGTACTCGACTACGC ACCAGCGCCAGGCAGATCACTATGACAAAGGCCGAAACCCCCGTGAAAGAGTCTACAAAGGCAGCTGCAAAATCC ACCACTAAGTCCATTGAAAAACCTACCGCAAAGCCGACTGCAAAGGCTACTGCAAAGTCCACTACAAAGTCCACT ACGAAGCCGACTGCAACATCTACCAAGTCAACTGCGAAGCCAAGCAAAATGGCAACATCTACCAAATTGACCTCT GCTACGAAGAAGCGCAAAGCTGATGAAGATGAGGAGAAACCTCGCGAAATCAAAAGATCTCGTGTCGCGCAACCC CGTCAGCCAAAGCCGAAAGTCAAAGTTATCATCAACGAGGCCCCGAAAACTAAACTGAATGTATTCGTCTGTGGT GAGGGTAGCTCTGGTGAGCTGGGGTTGGGCACAGCTAAGAATGTTATCGATGTGAAGCGCCCACGTTTGAATAAG CTTCTGTCTGCCGAAGAAGTCGGAGTTGTACAGGTTGCTGTCGGTGGCATGCACTGTCTAGCTCTAACGCATGAC AACAAGATATTCTCCTGGGGTGTGAACGATCAGGGTGCGCTCGGAAGAGAAACTGAATGGGACGGTGGATACAAG GACATTGAGAACGACAGCGATTCCGATTCCGATGATGAAGACAGTGGATTAAACCCCCGGGAGTCTATTCCCACT GCTATTCCCGTCACCGCTTTCCCCGAAGGCACTGTCTTCGTTGAAGTCGCCGCCGCCGATAGCGCAAGCTTTGCC TTGACCGATGATGGTCTAGTCTATGGCTGGGGCACCTTCCGAAGCAACGATGGAATCCTCGGATTTGACGCGTCT TCTCACGTTCAAACGATCCCAACTTTGATCTCGTCTTTGAAGAAGATCAAACACCTGACTTGCGGAGCTAATCAC GTTCTTGCCCTGAACGACCAAGGTCGCGTCTACTCGTGGGGCTCAGGACAACAGAATCAGCTCGGTCGCAGGATC GTGGAGCGCAACAGGCTGAATGGTCTTCAGCCCCGAGAGTTCGGTCTCCCTAAGAACATCGTCCACATCGGGAGT GGCTCGTACCACTCGTTTGCTGTTCACGCCACTGGCAAGGTCTATGCCTGGGGATTGAATAGCTTCGGTGCAACC GCCCTCCGCGAGGGCGCTGGCGACGATGAAGCTGCTATCGTGCATCCCACTCTTGTCGAATCACTTTCTGACAAA AATATTTCACAAATCTGCGGCGGCGCTCATCATTCGATTGCCATTGCTGGCGATGGTGAATGCTTGGTTTGGGGC CGTCTTGACGGTTTCCAAAGCGGCCTTAAGATCGATGCACTTTCCGATGACGCCGTTATCAAGGATGAGCGCGAT CGCCCCCGTATCCTGATCGCGCCTACCCCTGTTCCGGGTATCAAGGCCAAGGTTGTGGCGGCTGCCTCGGATCAT TCTCTCGCTATCGATTCCGATGGCCGTGCATGGTCATGGGGTTTCTCTGCTACCTATCAAACGGGACAAGGTACA CAGGATGACATCGAGGTGGCTACTGTTATCGATAACACTGCTACTCGTGGAAAGAAATTGAACTGGGCGGGTGCC GGTGGTCAGTTCTCTGTGTTCACGGAGCCTGCCAGCGCGTGA
Transcript	>Pro_DTO377G3_2|g3136.t1 ATGCCTCCTAAGAAGAACACGTCCAAGCCCGTCGAGGCTTCAACCGAGACGGTAAAGAGAAGTACTCGACTACGC ACCAGCGCCAGGCAGATCACTATGACAAAGGCCGAAACCCCCGTGAAAGAGTCTACAAAGGCAGCTGCAAAATCC ACCACTAAGTCCATTGAAAAACCTACCGCAAAGCCGACTGCAAAGGCTACTGCAAAGTCCACTACAAAGTCCACT ACGAAGCCGACTGCAACATCTACCAAGTCAACTGCGAAGCCAAGCAAAATGGCAACATCTACCAAATTGACCTCT GCTACGAAGAAGCGCAAAGCTGATGAAGATGAGGAGAAACCTCGCGAAATCAAAAGATCTCGTGTCGCGCAACCC CGTCAGCCAAAGCCGAAAGTCAAAGTTATCATCAACGAGGCCCCGAAAACTAAACTGAATGTATTCGTCTGTGGT GAGGGTAGCTCTGGTGAGCTGGGGTTGGGCACAGCTAAGAATGTTATCGATGTGAAGCGCCCACGTTTGAATAAG CTTCTGTCTGCCGAAGAAGTCGGAGTTGTACAGGTTGCTGTCGGTGGCATGCACTGTCTAGCTCTAACGCATGAC AACAAGATATTCTCCTGGGGTGTGAACGATCAGGGTGCGCTCGGAAGAGAAACTGAATGGGACGGTGGATACAAG GACATTGAGAACGACAGCGATTCCGATTCCGATGATGAAGACAGTGGATTAAACCCCCGGGAGTCTATTCCCACT GCTATTCCCGTCACCGCTTTCCCCGAAGGCACTGTCTTCGTTGAAGTCGCCGCCGCCGATAGCGCAAGCTTTGCC TTGACCGATGATGGTCTAGTCTATGGCTGGGGCACCTTCCGAAGCAACGATGGAATCCTCGGATTTGACGCGTCT TCTCACGTTCAAACGATCCCAACTTTGATCTCGTCTTTGAAGAAGATCAAACACCTGACTTGCGGAGCTAATCAC GTTCTTGCCCTGAACGACCAAGGTCGCGTCTACTCGTGGGGCTCAGGACAACAGAATCAGCTCGGTCGCAGGATC GTGGAGCGCAACAGGCTGAATGGTCTTCAGCCCCGAGAGTTCGGTCTCCCTAAGAACATCGTCCACATCGGGAGT GGCTCGTACCACTCGTTTGCTGTTCACGCCACTGGCAAGGTCTATGCCTGGGGATTGAATAGCTTCGGTGCAACC GCCCTCCGCGAGGGCGCTGGCGACGATGAAGCTGCTATCGTGCATCCCACTCTTGTCGAATCACTTTCTGACAAA AATATTTCACAAATCTGCGGCGGCGCTCATCATTCGATTGCCATTGCTGGCGATGGTGAATGCTTGGTTTGGGGC CGTCTTGACGGTTTCCAAAGCGGCCTTAAGATCGATGCACTTTCCGATGACGCCGTTATCAAGGATGAGCGCGAT CGCCCCCGTATCCTGATCGCGCCTACCCCTGTTCCGGGTATCAAGGCCAAGGTTGTGGCGGCTGCCTCGGATCAT TCTCTCGCTATCGATTCCGATGGCCGTGCATGGTCATGGGGTTTCTCTGCTACCTATCAAACGGGACAAGGTACA CAGGATGACATCGAGGTGGCTACTGTTATCGATAACACTGCTACTCGTGGAAAGAAATTGAACTGGGCGGGTGCC GGTGGTCAGTTCTCTGTGTTCACGGAGCCTGCCAGCGCGTGA
Gene	>Pro_DTO377G3_2|g3136.t1 ATGCCTCCTAAGAAGAACACGTCCAAGCCCGTCGAGGCTTCAACCGAGACGGTAAAGAGAAGTACTCGACTACGC ACCAGCGCCAGGCAGATCACTATGACAAAGGCCGAAACCCCCGTGAAAGAGTCTACAAAGGCAGCTGCAAAATCC ACCACTAAGTCCATTGAAAAACCTACCGCAAAGCCGACTGCAAAGGCTACTGCAAAGTCCACTACAAAGTCCACT ACGAAGCCGACTGCAACATCTACCAAGTCAACTGCGAAGCCAAGCAAAATGGCAACATCTACCAAATTGACCTCT GCTACGAAGAAGCGCAAAGCTGATGAAGATGAGGAGAAACCTCGCGAAATCAAAAGATCTCGTGTCGCGCAACCC CGTCAGCCAAAGCCGAAAGTCAAAGTTATCATCAACGAGGCCCCGAAAACTAAACTGAATGTATTCGTCTGTGGT GAGGGTAGCTCTGGTGAGCTGGGGTTGGGCACAGCTAAGAATGTTATCGATGTGAAGCGCCCACGTTTGAATAAG CTTCTGTCTGCCGAAGAAGTCGGAGTTGTACAGGTTGCTGTCGGTGGCATGCACTGTCTAGCTCTAACGCATGAC AACAAGATATTCTCCTGGGGTGTGAACGATCAGGGTGCGCTCGGAAGAGAAACTGAATGGGACGGTGGATACAAG GACATTGAGAACGACAGCGATTCCGATTCCGATGATGAAGACAGTGGATTAAACCCCCGGGAGTCTATTCCCACT GCTATTCCCGTCACCGCTTTCCCCGAAGGCACTGTCTTCGTTGAAGTCGCCGCCGCCGATAGCGCAAGCTTTGCC TTGACCGATGATGGTCTAGTCTATGGCTGGGGCACCTTCCGAGTAAGACGAACTGACTGTTTTGAATTACTTTGC TTTTACTGACAACGATTCTAGAGCAACGATGGAATCCTCGGATTTGACGCGTCTTCTCACGTTCAAACGATCCCA ACTTTGATCTCGTCTTTGAAGAAGATCAAACACCTGACTTGCGGAGCTAATCACGTTCTTGCCCTGAACGACCAA GGTCGCGTCTACTCGTGGGGCTCAGGACAACAGAATCAGCTCGGTCGCAGGATCGTGGAGCGCAACAGGCTGAAT GGTCTTCAGCCCCGAGAGTTCGGTCTCCCTAAGAACATCGTCCACATCGGGAGTGGCTCGTACCACTCGTTTGCT GTTCACGCCACTGGCAAGGTCTATGCCTGGGGATTGAATAGCTTCGGTGCAACCGCCCTCCGCGAGGGCGCTGGC GACGATGAAGCTGCTATCGTGCATCCCACTCTTGTCGAATCACTTTCTGACAAAAATATTTCACAAATCTGCGGC GGCGCTCATCATTCGATTGCCATTGCTGGCGATGGTGAATGCTTGGTTTGGGGCCGTCTTGACGGTTTCCAAAGC GGCCTTAAGATCGATGCACTTTCCGATGACGCCGTTATCAAGGATGAGCGCGATCGCCCCCGTATCCTGATCGCG CCTACCCCTGTTCCGGGTATCAAGGCCAAGGTTGTGGCGGCTGCCTCGGATCATTCTCTCGCTATCGATTCCGAT GGCCGTGCATGGTCATGGGGTTTCTCTGCTACCTATCAAACGGGACAAGGTACACAGGATGACATCGAGGTGGCT ACTGTTATCGATAACACTGCTACTCGTGGAAAGAAATTGAACTGGGCGGGTGCCGGTGGTCAGTTCTCTGTGTTC ACGGAGCCTGCCAGCGCGTGA