Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3134.t1
Gene name
Locationscaffold_04:797427..798253
Strand-
Gene length (bp)826
Transcript length (bp)561
Coding sequence length (bp)561
Protein length (aa) 187

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10785 NADH-u_ox-rdase NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit 1.3E-29 16 102
PF12853 NADH_u_ox_C C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit 1.4E-25 112 184

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

Domain # Start End Length
1 40 57 17
2 72 90 18

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3134.t1
MATDTKTAIVPSKRANTDYPLIDSDPHLKRVFGYARPSDWAVAGGMASAAPISLWIMERASPSHVGRGGFAPVMR
LATAVGLLGGLHVLYQRSCQRFYGFTENAREVEMDTREMVDKVKKGEPLYGKSQMSPHLQGMAARNSRYSELFIH
VVPWFNFVNHDQHGVDTAKYYQQAEQELEAERTGSS*
Coding >Pro_DTO377G3_2|g3134.t1
ATGGCGACCGATACCAAAACAGCCATTGTGCCCTCTAAGCGGGCCAATACTGACTACCCGTTGATTGATTCCGAC
CCGCATTTGAAACGAGTGTTCGGATATGCCCGGCCTTCCGACTGGGCCGTGGCTGGCGGAATGGCCTCGGCTGCT
CCCATCTCGCTCTGGATCATGGAGAGAGCAAGTCCGTCGCATGTAGGCCGTGGTGGCTTCGCTCCTGTTATGCGA
CTCGCGACAGCTGTTGGTCTGCTTGGCGGTCTTCATGTGCTCTATCAGCGATCCTGCCAGCGCTTCTACGGCTTC
ACTGAGAATGCTAGGGAGGTTGAGATGGATACTCGTGAGATGGTCGATAAGGTCAAGAAGGGCGAGCCTCTGTAC
GGTAAATCCCAAATGTCGCCTCATCTACAAGGCATGGCAGCCCGCAACTCGCGGTACTCAGAACTCTTCATCCAT
GTTGTCCCATGGTTCAACTTTGTCAACCACGATCAGCATGGCGTGGACACTGCCAAATACTACCAGCAAGCCGAG
CAAGAATTGGAGGCAGAGCGCACTGGCTCTTCATGA
Transcript >Pro_DTO377G3_2|g3134.t1
ATGGCGACCGATACCAAAACAGCCATTGTGCCCTCTAAGCGGGCCAATACTGACTACCCGTTGATTGATTCCGAC
CCGCATTTGAAACGAGTGTTCGGATATGCCCGGCCTTCCGACTGGGCCGTGGCTGGCGGAATGGCCTCGGCTGCT
CCCATCTCGCTCTGGATCATGGAGAGAGCAAGTCCGTCGCATGTAGGCCGTGGTGGCTTCGCTCCTGTTATGCGA
CTCGCGACAGCTGTTGGTCTGCTTGGCGGTCTTCATGTGCTCTATCAGCGATCCTGCCAGCGCTTCTACGGCTTC
ACTGAGAATGCTAGGGAGGTTGAGATGGATACTCGTGAGATGGTCGATAAGGTCAAGAAGGGCGAGCCTCTGTAC
GGTAAATCCCAAATGTCGCCTCATCTACAAGGCATGGCAGCCCGCAACTCGCGGTACTCAGAACTCTTCATCCAT
GTTGTCCCATGGTTCAACTTTGTCAACCACGATCAGCATGGCGTGGACACTGCCAAATACTACCAGCAAGCCGAG
CAAGAATTGGAGGCAGAGCGCACTGGCTCTTCATGA
Gene >Pro_DTO377G3_2|g3134.t1
ATGGCGACCGATACCAAAACAGCCATTGTGCCCTCTAAGCGGGCCAATACTGACTACCCGGTATGATTGATCTAA
CATGAACCGGGGCTACTACTGTTTCCGTTCCCGATTGCTTGCGTATGTCTTTGGCTAACATATCCCACAGTTGAT
TGATTCCGACCCGTACGCTTTACCCCGGATTCTAGGATTTTATCACAAGCTTATATCTTTTTCAGGCATTTGAAA
CGAGTGTTCGGATATGCCCGGCCTTCCGACTGGGCCGTGGCTGGCGGAATGGCCTCGGCTGCTCCCATCTCGCTC
TGGATCATGGAGAGAGCAAGTCCGTCGCATGTAGGCCGTGGTGGCTTCGCTCCTGTTATGCGACTCGCGACAGCT
GTTGGTCTGCTTGGCGGTCTTCATGTGCTCTATCAGCGATCCTGCCGTAAGTCATATCCCTCCACTTGAACTCTG
ACCCGCTTTTTTGGATGACATCTCACTCACACCTTCACAGAGCGCTTCTACGGCTTCACTGAGAATGCTAGGGAG
GTTGAGATGGATACTCGTGAGATGGTCGATAAGGTCAAGAAGGGCGAGCCTCTGTACGGTAAATCCCAAATGTCG
CCTCATCTACAAGGCATGGCAGCCCGCAACTCGCGGTACTCAGAACTCTTCATCCATGTTGTCCCATGGTTCAAC
TTTGTCAACCACGATCAGGTAAGTCCTCCATTTGAGTCGATTTGGGAGGGATGATGTTGATTGTTTTTTGTATCA
GCATGGCGTGGACACTGCCAAATACTACCAGCAAGCCGAGCAAGAATTGGAGGCAGAGCGCACTGGCTCTTCATG
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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