Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3105.t1
Gene name
Locationscaffold_04:705975..707464
Strand-
Gene length (bp)1489
Transcript length (bp)1368
Coding sequence length (bp)1368
Protein length (aa) 456

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00840 Glyco_hydro_7 Glycosyl hydrolase family 7 1.0E-207 21 452

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 12.32 5.36 19.28
5d_25C Five days - 25 degrees Celsius 12.65 5.57 19.72
7d_25C Seven days - 25 degrees Celsius 13.71 6.13 21.29
10d_25C Ten days - 25 degrees Celsius 14.48 6.58 22.38
7d_15C Seven days - 15 degrees Celsius 10.94 4.56 17.33
7d_30C Seven days - 30 degrees Celsius 11.89 5.09 18.70

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.958111 no
3d_25C 7d_25C 0.803554 no
3d_25C 7d_15C 0.783373 no
3d_25C 7d_30C 0.940984 no
3d_25C 10d_25C 0.677784 no
5d_25C 7d_25C 0.858022 no
5d_25C 7d_15C 0.733844 no
5d_25C 7d_30C 0.897086 no
5d_25C 10d_25C 0.738285 no
7d_25C 7d_15C 0.561423 no
7d_25C 7d_30C 0.732762 no
7d_25C 10d_25C 0.906566 no
7d_15C 7d_30C 0.857680 no
7d_15C 10d_25C 0.430335 no
7d_30C 10d_25C 0.600505 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3105.t1
MYQRALLFSVLAAAARAQQAGTLTAETHPSLTWQKCTTAGSCTDQQGSVVIDANWRWLHSVDGYTNCYTGNEWDA
TLCPDDETCATNCALDGADYAGTYGATTDGNALTLSFVTGANIGSRLYLMEDESTYQIFKLKNQEFTFDVDTSGL
PCGLNGALYFVSMDSDGGLAKYTGNKAGAKYGTGYCDSQCPRDLKFINGQANVDGWVPSENDKNAGVGGHGSCCP
EMDIWEANSISTAYTPHPCDSPEQTMCEGDDCGGTYSSTRYAGTCDPDGCDFNSFRMGNETFFGPGMTVDTKSKI
TVVTQFITSDGTDTGTLSEIKRIYVQDGKVIANSASDVSGVTGNSITTDFCTAQKKAFGDEDIFAQHGGLATMGE
GLDQGMVLVMSLWDDHYANMLWLDGEVYPTDASASDPGAARGTCATTSGDPATVEAESGSAKVTYSNIKVGPIGS
TYASS*
Coding >Pro_DTO377G3_2|g3105.t1
ATGTATCAACGCGCACTCCTTTTCTCCGTCCTGGCGGCCGCAGCCCGTGCCCAGCAAGCTGGCACATTGACGGCT
GAGACCCATCCCTCTTTGACCTGGCAAAAGTGCACTACCGCGGGCAGTTGCACCGACCAGCAGGGCTCTGTTGTC
ATTGATGCCAACTGGCGTTGGCTTCACTCTGTCGATGGTTACACCAACTGCTACACTGGAAACGAGTGGGATGCG
ACTCTCTGCCCCGATGACGAGACTTGCGCCACTAACTGTGCGTTGGACGGCGCTGACTACGCCGGCACATACGGT
GCGACCACTGATGGCAATGCCCTCACTTTGAGCTTCGTCACTGGCGCCAACATTGGCTCTCGTCTGTACCTGATG
GAGGACGAGAGTACCTACCAGATATTCAAGCTGAAGAACCAGGAGTTCACATTCGACGTGGATACTTCCGGGTTG
CCCTGCGGACTCAATGGAGCTCTGTACTTTGTCTCCATGGATTCCGATGGTGGCCTGGCTAAGTACACGGGGAAC
AAGGCAGGTGCCAAGTACGGAACTGGCTATTGCGATTCTCAGTGCCCTCGTGATCTGAAGTTCATCAACGGCCAG
GCCAACGTGGACGGCTGGGTGCCTTCCGAGAACGACAAGAACGCTGGTGTTGGCGGCCATGGATCTTGCTGCCCT
GAGATGGATATCTGGGAAGCCAATAGCATTTCCACTGCTTACACGCCTCACCCTTGCGACAGCCCTGAACAGACT
ATGTGCGAGGGCGATGATTGTGGCGGAACTTACTCTTCCACCCGCTACGCAGGAACCTGCGATCCCGATGGATGT
GACTTTAACTCCTTCCGCATGGGAAATGAGACCTTCTTCGGTCCCGGCATGACTGTTGACACTAAGTCCAAGATA
ACCGTGGTCACTCAGTTCATCACCAGCGACGGCACCGACACCGGCACCCTCAGCGAGATCAAGCGCATCTACGTC
CAGGACGGAAAAGTCATCGCCAACTCAGCCTCGGATGTTAGCGGTGTCACCGGAAACTCGATCACCACCGACTTC
TGCACAGCCCAGAAGAAAGCCTTCGGCGATGAGGATATCTTCGCCCAGCACGGTGGTCTGGCTACCATGGGCGAG
GGGTTGGACCAGGGAATGGTCCTTGTCATGAGCCTGTGGGATGACCACTATGCTAACATGCTCTGGTTGGATGGG
GAGGTCTACCCCACTGATGCATCTGCCTCCGATCCCGGTGCTGCTCGCGGCACATGCGCCACCACTTCCGGCGAC
CCAGCAACCGTTGAGGCCGAGTCGGGCTCGGCCAAGGTGACCTACTCTAACATCAAGGTCGGCCCCATTGGCTCC
ACCTACGCTTCTTCCTAG
Transcript >Pro_DTO377G3_2|g3105.t1
ATGTATCAACGCGCACTCCTTTTCTCCGTCCTGGCGGCCGCAGCCCGTGCCCAGCAAGCTGGCACATTGACGGCT
GAGACCCATCCCTCTTTGACCTGGCAAAAGTGCACTACCGCGGGCAGTTGCACCGACCAGCAGGGCTCTGTTGTC
ATTGATGCCAACTGGCGTTGGCTTCACTCTGTCGATGGTTACACCAACTGCTACACTGGAAACGAGTGGGATGCG
ACTCTCTGCCCCGATGACGAGACTTGCGCCACTAACTGTGCGTTGGACGGCGCTGACTACGCCGGCACATACGGT
GCGACCACTGATGGCAATGCCCTCACTTTGAGCTTCGTCACTGGCGCCAACATTGGCTCTCGTCTGTACCTGATG
GAGGACGAGAGTACCTACCAGATATTCAAGCTGAAGAACCAGGAGTTCACATTCGACGTGGATACTTCCGGGTTG
CCCTGCGGACTCAATGGAGCTCTGTACTTTGTCTCCATGGATTCCGATGGTGGCCTGGCTAAGTACACGGGGAAC
AAGGCAGGTGCCAAGTACGGAACTGGCTATTGCGATTCTCAGTGCCCTCGTGATCTGAAGTTCATCAACGGCCAG
GCCAACGTGGACGGCTGGGTGCCTTCCGAGAACGACAAGAACGCTGGTGTTGGCGGCCATGGATCTTGCTGCCCT
GAGATGGATATCTGGGAAGCCAATAGCATTTCCACTGCTTACACGCCTCACCCTTGCGACAGCCCTGAACAGACT
ATGTGCGAGGGCGATGATTGTGGCGGAACTTACTCTTCCACCCGCTACGCAGGAACCTGCGATCCCGATGGATGT
GACTTTAACTCCTTCCGCATGGGAAATGAGACCTTCTTCGGTCCCGGCATGACTGTTGACACTAAGTCCAAGATA
ACCGTGGTCACTCAGTTCATCACCAGCGACGGCACCGACACCGGCACCCTCAGCGAGATCAAGCGCATCTACGTC
CAGGACGGAAAAGTCATCGCCAACTCAGCCTCGGATGTTAGCGGTGTCACCGGAAACTCGATCACCACCGACTTC
TGCACAGCCCAGAAGAAAGCCTTCGGCGATGAGGATATCTTCGCCCAGCACGGTGGTCTGGCTACCATGGGCGAG
GGGTTGGACCAGGGAATGGTCCTTGTCATGAGCCTGTGGGATGACCACTATGCTAACATGCTCTGGTTGGATGGG
GAGGTCTACCCCACTGATGCATCTGCCTCCGATCCCGGTGCTGCTCGCGGCACATGCGCCACCACTTCCGGCGAC
CCAGCAACCGTTGAGGCCGAGTCGGGCTCGGCCAAGGTGACCTACTCTAACATCAAGGTCGGCCCCATTGGCTCC
ACCTACGCTTCTTCCTAG
Gene >Pro_DTO377G3_2|g3105.t1
ATGTATCAACGCGCACTCCTTTTCTCCGTCCTGGCGGCCGCAGCCCGTGCCCAGCAAGCTGGCACATTGACGGCT
GAGACCCATCCCTCTTTGACCTGGCAAAAGTGCACTACCGCGGGCAGTTGCACCGACCAGCAGGGCTCTGTTGTC
ATTGATGCCAACTGGCGTTGGCTTCACTCTGTCGATGGTTACACCAACTGCTACACTGGAAACGAGGTAAGAGAT
CCTCAACCGAGAAGGTGAGCGTTCACATTGATTGACTTGTTTGATGATAGTGGGATGCGACTCTCTGCCCCGATG
ACGAGACTTGCGCCACTAACTGTGCGTTGGACGGCGCTGACTACGCCGGCACATACGGTGCGACCACTGATGGCA
ATGCCCTCACTTTGAGCTTCGTCACTGGCGCCAACATTGGCTCTCGTCTGTACCTGATGGAGGACGAGAGTACCT
ACCAGATATTCAAGCTGAAGAACCAGGAGTTCACATTCGACGTGGATACTTCCGGGTTGCCCTGCGGACTCAATG
GAGCTCTGTACTTTGTCTCCATGGATTCCGATGGTGGCCTGGCTAAGTACACGGGGAACAAGGCAGGTGCCAAGT
ACGGAACTGGCTATTGCGATTCTCAGTGCCCTCGTGATCTGAAGTTCATCAACGGCCAGGTGAGTTTTTATACTG
GTCAATTCGAACGGTTTGCGGGCAAAGTGACTGATGCGCGATACAGGCCAACGTGGACGGCTGGGTGCCTTCCGA
GAACGACAAGAACGCTGGTGTTGGCGGCCATGGATCTTGCTGCCCTGAGATGGATATCTGGGAAGCCAATAGCAT
TTCCACTGCTTACACGCCTCACCCTTGCGACAGCCCTGAACAGACTATGTGCGAGGGCGATGATTGTGGCGGAAC
TTACTCTTCCACCCGCTACGCAGGAACCTGCGATCCCGATGGATGTGACTTTAACTCCTTCCGCATGGGAAATGA
GACCTTCTTCGGTCCCGGCATGACTGTTGACACTAAGTCCAAGATAACCGTGGTCACTCAGTTCATCACCAGCGA
CGGCACCGACACCGGCACCCTCAGCGAGATCAAGCGCATCTACGTCCAGGACGGAAAAGTCATCGCCAACTCAGC
CTCGGATGTTAGCGGTGTCACCGGAAACTCGATCACCACCGACTTCTGCACAGCCCAGAAGAAAGCCTTCGGCGA
TGAGGATATCTTCGCCCAGCACGGTGGTCTGGCTACCATGGGCGAGGGGTTGGACCAGGGAATGGTCCTTGTCAT
GAGCCTGTGGGATGACCACTATGCTAACATGCTCTGGTTGGATGGGGAGGTCTACCCCACTGATGCATCTGCCTC
CGATCCCGGTGCTGCTCGCGGCACATGCGCCACCACTTCCGGCGACCCAGCAACCGTTGAGGCCGAGTCGGGCTC
GGCCAAGGTGACCTACTCTAACATCAAGGTCGGCCCCATTGGCTCCACCTACGCTTCTTCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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