Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g3083.t1
Gene name
Location	scaffold_04:664215..665597
Strand	+
Gene length (bp)	1382
Transcript length (bp)	1227
Coding sequence length (bp)	1227
Protein length (aa)	409

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00155	Aminotran_1_2	Aminotransferase class I and II	6.9E-44	48	388
PF00266	Aminotran_5	Aminotransferase class-V	1.6E-07	66	200
PF01053	Cys_Met_Meta_PP	Cys/Met metabolism PLP-dependent enzyme	2.0E-05	88	200
PF01212	Beta_elim_lyase	Beta-eliminating lyase	7.1E-05	59	198

GO

GO Term	Description	Terminal node
GO:0030170	pyridoxal phosphate binding	Yes
GO:0016829	lyase activity	Yes
GO:0009058	biosynthetic process	Yes
GO:0006520	cellular amino acid metabolic process	Yes
GO:0008152	metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:1901363	heterocyclic compound binding	No
GO:0097159	organic cyclic compound binding	No
GO:0019752	carboxylic acid metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0019842	vitamin binding	No
GO:0003824	catalytic activity	No
GO:0044238	primary metabolic process	No
GO:0043168	anion binding	No
GO:0009987	cellular process	No
GO:0043436	oxoacid metabolic process	No
GO:0006082	organic acid metabolic process	No
GO:0070279	vitamin B6 binding	No
GO:0044281	small molecule metabolic process	No
GO:0008150	biological_process	No
GO:0008144	drug binding	No
GO:0003674	molecular_function	No
GO:0006807	nitrogen compound metabolic process	No
GO:0043167	ion binding	No
GO:0048037	cofactor binding	No
GO:0050662	coenzyme binding	No
GO:0005488	binding	No
GO:0044237	cellular metabolic process	No
GO:0036094	small molecule binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g3083.t1 MVKIEAFAVEQWMDKYETTAKYNTAETCCASISVDDLRALSDDKESNPLAQLQSTKLTYGAIRGSDKLRNTLANL YSVRAPTQLPKENILITAGAIQANFLLLYTLVGPGDHVICHYPTYQQLFSVPASVGAEVSLWKSKEADGWQLDIE ELKGLIRPNTKLIIINNPQNPTGAIIPRQTLQQLVDIAREKSIIIHSDEVYRPLFHNISPADPRFPPTLLSMGYE RTVVTGSVSKAYSLAGLRVGWVASRDSSIIESVANTRDYTTISVGQIDEAIAGFALAPHCIHNLLKRNIDLARTN LSILEKFIDAHRWACEWIKPQAGTTAFVRFNKMGKPVDDVAFCEMLQERTGVMLVPGSLCFGVGEDFKGYVRIGY VNETEVLERGLDALGKFMEDGYEDVPVKKPLQK*
Coding	>Pro_DTO377G3_2\|g3083.t1 ATGGTGAAGATTGAGGCCTTCGCGGTTGAACAGTGGATGGACAAGTATGAGACCACTGCGAAATATAATACCGCC GAGACCTGCTGTGCATCCATCTCCGTCGACGATCTCCGCGCGCTCTCCGATGACAAGGAGTCCAACCCTTTAGCC CAGCTTCAATCCACCAAACTCACATATGGGGCGATCCGTGGCTCTGATAAACTACGAAATACACTGGCGAATCTG TACTCGGTAAGGGCACCGACGCAGTTGCCGAAGGAAAATATCTTGATCACCGCTGGCGCAATCCAAGCGAACTTC TTGCTGTTGTATACGTTGGTCGGCCCAGGAGACCATGTAATTTGCCACTATCCAACATATCAACAACTGTTCTCC GTCCCTGCGTCAGTGGGGGCCGAAGTCAGCCTGTGGAAGTCCAAAGAGGCCGATGGATGGCAGCTGGACATTGAA GAGCTGAAAGGCCTTATCCGACCCAACACGAAGTTAATCATCATAAACAACCCGCAAAACCCAACTGGAGCCATC ATCCCGCGCCAGACTCTCCAACAATTGGTCGATATTGCCCGCGAGAAATCCATCATCATCCACTCCGATGAGGTC TATCGCCCACTTTTCCACAACATCAGTCCCGCGGATCCGAGGTTCCCACCCACACTTCTTTCTATGGGATACGAA CGCACGGTGGTGACAGGATCCGTTTCCAAAGCCTATAGCCTGGCGGGTTTGCGGGTAGGCTGGGTTGCGTCGCGG GATAGTTCGATCATTGAATCTGTTGCTAACACGCGCGATTATACAACCATCTCGGTTGGGCAAATTGACGAGGCA ATTGCCGGTTTTGCATTAGCACCGCATTGCATTCACAATCTTTTGAAACGAAATATCGATCTAGCCCGGACTAAT CTCTCTATTCTAGAGAAGTTCATCGATGCTCATCGCTGGGCATGTGAGTGGATTAAGCCGCAAGCCGGCACCACT GCATTTGTGCGCTTTAACAAGATGGGAAAACCCGTAGACGATGTCGCTTTCTGTGAGATGCTTCAGGAACGGACC GGTGTGATGCTTGTGCCGGGAAGCCTTTGCTTTGGAGTCGGAGAAGACTTCAAGGGTTATGTTCGCATTGGGTAC GTCAATGAAACCGAGGTCCTGGAGCGGGGCTTGGATGCCTTGGGTAAGTTCATGGAAGATGGATATGAGGATGTA CCAGTGAAGAAGCCCTTGCAAAAGTAA
Transcript	>Pro_DTO377G3_2\|g3083.t1 ATGGTGAAGATTGAGGCCTTCGCGGTTGAACAGTGGATGGACAAGTATGAGACCACTGCGAAATATAATACCGCC GAGACCTGCTGTGCATCCATCTCCGTCGACGATCTCCGCGCGCTCTCCGATGACAAGGAGTCCAACCCTTTAGCC CAGCTTCAATCCACCAAACTCACATATGGGGCGATCCGTGGCTCTGATAAACTACGAAATACACTGGCGAATCTG TACTCGGTAAGGGCACCGACGCAGTTGCCGAAGGAAAATATCTTGATCACCGCTGGCGCAATCCAAGCGAACTTC TTGCTGTTGTATACGTTGGTCGGCCCAGGAGACCATGTAATTTGCCACTATCCAACATATCAACAACTGTTCTCC GTCCCTGCGTCAGTGGGGGCCGAAGTCAGCCTGTGGAAGTCCAAAGAGGCCGATGGATGGCAGCTGGACATTGAA GAGCTGAAAGGCCTTATCCGACCCAACACGAAGTTAATCATCATAAACAACCCGCAAAACCCAACTGGAGCCATC ATCCCGCGCCAGACTCTCCAACAATTGGTCGATATTGCCCGCGAGAAATCCATCATCATCCACTCCGATGAGGTC TATCGCCCACTTTTCCACAACATCAGTCCCGCGGATCCGAGGTTCCCACCCACACTTCTTTCTATGGGATACGAA CGCACGGTGGTGACAGGATCCGTTTCCAAAGCCTATAGCCTGGCGGGTTTGCGGGTAGGCTGGGTTGCGTCGCGG GATAGTTCGATCATTGAATCTGTTGCTAACACGCGCGATTATACAACCATCTCGGTTGGGCAAATTGACGAGGCA ATTGCCGGTTTTGCATTAGCACCGCATTGCATTCACAATCTTTTGAAACGAAATATCGATCTAGCCCGGACTAAT CTCTCTATTCTAGAGAAGTTCATCGATGCTCATCGCTGGGCATGTGAGTGGATTAAGCCGCAAGCCGGCACCACT GCATTTGTGCGCTTTAACAAGATGGGAAAACCCGTAGACGATGTCGCTTTCTGTGAGATGCTTCAGGAACGGACC GGTGTGATGCTTGTGCCGGGAAGCCTTTGCTTTGGAGTCGGAGAAGACTTCAAGGGTTATGTTCGCATTGGGTAC GTCAATGAAACCGAGGTCCTGGAGCGGGGCTTGGATGCCTTGGGTAAGTTCATGGAAGATGGATATGAGGATGTA CCAGTGAAGAAGCCCTTGCAAAAGTAA
Gene	>Pro_DTO377G3_2\|g3083.t1 ATGGTGAAGATTGAGGCCTTCGCGGTTGAACAGGTACCTCCCCGCATTACCCCATGGCTGGGTGGTACTTGTCTG CTCCCTCTGTCGTTACAGATGTGTTTTGTTAACCGTCCTGCAGTGGATGGACAAGTATGAGACCACTGCGAAATA TAATACCGCCGAGACCTGCTGTGCATCCATCTCCGTCGACGATCTCCGCGCGCTCTCCGATGACAAGGAGTCCAA CCCTTTAGCCCAGCTTCAATCCACCAAACTCACATATGGGGCGATCCGTGGCTCTGATAAACTACGAAATACACT GGCGAATCTGTACTCGGTAAGGGCACCGACGCAGTTGCCGAAGGAAAATATCTTGATCACCGCTGGCGCAATCCA AGCGAACTTCTTGCTGTTGTATACGTTGGTCGGCCCAGGAGACCATGTAATTTGCCACTATCCAACATATCAACA ACTGTTCTCCGTCCCTGCGTCAGTGGGGGCCGAAGTCAGCCTGTGGAAGTCCAAAGAGGCCGATGGATGGCAGCT GGACATTGAAGAGCTGAAAGGCCTTATCCGACCCAACACGAAGTTAATCATCATAAAGTATGGATTTCCTGACTC TTATTACAATCATGCAAGGCGTGCTTTTTTTTCCTGACCATCATTCTCATAGCAACCCGCAAAACCCAACTGGAG CCATCATCCCGCGCCAGACTCTCCAACAATTGGTCGATATTGCCCGCGAGAAATCCATCATCATCCACTCCGATG AGGTCTATCGCCCACTTTTCCACAACATCAGTCCCGCGGATCCGAGGTTCCCACCCACACTTCTTTCTATGGGAT ACGAACGCACGGTGGTGACAGGATCCGTTTCCAAAGCCTATAGCCTGGCGGGTTTGCGGGTAGGCTGGGTTGCGT CGCGGGATAGTTCGATCATTGAATCTGTTGCTAACACGCGCGATTATACAACCATCTCGGTTGGGCAAATTGACG AGGCAATTGCCGGTTTTGCATTAGCACCGCATTGCATTCACAATCTTTTGAAACGAAATATCGATCTAGCCCGGA CTAATCTCTCTATTCTAGAGAAGTTCATCGATGCTCATCGCTGGGCATGTGAGTGGATTAAGCCGCAAGCCGGCA CCACTGCATTTGTGCGCTTTAACAAGATGGGAAAACCCGTAGACGATGTCGCTTTCTGTGAGATGCTTCAGGAAC GGACCGGTGTGATGCTTGTGCCGGGAAGCCTTTGCTTTGGAGTCGGAGAAGACTTCAAGGGTTATGTTCGCATTG GGTACGTCAATGAAACCGAGGTCCTGGAGCGGGGCTTGGATGCCTTGGGTAAGTTCATGGAAGATGGATATGAGG ATGTACCAGTGAAGAAGCCCTTGCAAAAGTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences