Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3080.t1
Gene name
Locationscaffold_04:653606..655449
Strand-
Gene length (bp)1843
Transcript length (bp)1752
Coding sequence length (bp)1752
Protein length (aa) 584

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 5.8E-04 280 318
PF00400 WD40 WD domain, G-beta repeat 2.9E-08 324 361
PF00400 WD40 WD domain, G-beta repeat 8.3E-02 409 446
PF00400 WD40 WD domain, G-beta repeat 9.8E-04 502 537
PF00400 WD40 WD domain, G-beta repeat 4.4E-03 555 583
PF12894 ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 2.4E-05 495 563

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3080.t1
MSALLGLGYDSSDDDDATAMPSSVTTATKVVAAPEVNTEDQAHMQMALANASSQALTYNATYDDLTKPSQGPVNP
FKPAGPGNGIKRKNVPTGFAEEAAISESTFSAQHRTFQSLGYTRNPTLPDQFIGSLENAAQYGGRDIVQIKPTKS
ASANWRTKRQKKGDSSVVEGEGAYLGPWAKYQNDQQYDYVEVAEGEERALGSDEEYIEEEDETLTTTAPMPAMSK
DATAYEGDLATQETTEFHGSEQYDYQGRTYMHVPQDLDIDLRKEPGTTKNYVPKKLVQTWKSHTKPITSLRFIPK
SGHLLLSSAADGKAKLWDVYHSRELLRTFSGHTKAISDTDFHPSGTTFLTGSYDRQIKLWDTEYGKCLGRFSTGK
TPHVVRFNPSPEHSHEFLAGMSDKKIVQFDTRSGELVQEYDHHLAAVNTLTFVDDNRRFISTSDDKSLRAWEYGI
PVPIKFIAEPYMFALTRAAPHPNGKYVAFQSGDNQIVVYSATDKFRQNRKKRFVGHNTSGYAIDLKISPDGQFLV
SGDSGGYVCFWDWKTGKMYHKIQAGGKEGGAITCVDWHPHESSKVVTGGLDGVIRYWD*
Coding >Pro_DTO377G3_2|g3080.t1
ATGTCCGCCTTACTAGGTCTTGGTTATGACTCCAGCGATGATGATGACGCCACAGCTATGCCCTCGTCTGTGACG
ACCGCGACCAAGGTCGTTGCTGCACCAGAGGTCAATACAGAGGACCAAGCGCATATGCAGATGGCCCTCGCCAAC
GCCTCATCCCAAGCCCTCACCTACAATGCCACATACGATGATCTTACAAAGCCTTCCCAGGGCCCTGTGAACCCG
TTCAAGCCAGCAGGTCCGGGAAACGGTATCAAAAGAAAGAATGTTCCGACTGGATTTGCTGAAGAAGCAGCCATC
AGCGAGTCCACATTTTCTGCGCAACATCGCACGTTCCAAAGTCTGGGATACACTCGCAATCCGACACTACCGGAC
CAATTTATCGGAAGCCTCGAAAATGCGGCACAATATGGAGGCCGGGATATTGTACAAATTAAGCCGACTAAGAGC
GCGTCCGCAAACTGGCGGACAAAGCGGCAAAAGAAGGGCGACTCCAGTGTTGTGGAGGGAGAGGGCGCATATCTG
GGACCCTGGGCGAAATACCAAAATGACCAGCAATATGACTACGTGGAGGTTGCTGAAGGAGAAGAGCGCGCGCTT
GGTAGTGACGAGGAATATATCGAAGAGGAAGACGAGACTCTGACTACCACGGCACCTATGCCGGCCATGAGTAAG
GATGCCACCGCTTACGAAGGTGATCTTGCCACGCAAGAAACCACCGAGTTTCACGGATCAGAGCAGTACGACTAC
CAGGGCCGGACGTACATGCACGTGCCTCAGGACTTGGATATCGATTTGCGCAAAGAGCCCGGCACCACCAAGAAC
TACGTACCCAAAAAACTCGTGCAAACTTGGAAATCGCACACCAAGCCGATCACCTCTCTTCGATTCATCCCCAAA
TCTGGCCACTTGCTGCTTTCATCAGCAGCCGATGGGAAAGCCAAGCTCTGGGATGTGTATCACTCTCGGGAACTC
TTGCGGACTTTCTCCGGCCACACCAAAGCAATCTCAGACACAGATTTCCATCCATCGGGGACGACCTTCCTTACC
GGGTCATACGACCGACAGATCAAGCTCTGGGATACCGAATACGGTAAATGTCTTGGCCGGTTTTCCACAGGCAAG
ACACCGCACGTTGTCCGCTTCAACCCTAGCCCAGAACACTCACACGAGTTCCTGGCCGGTATGTCTGACAAGAAG
ATTGTGCAATTCGACACCCGGTCCGGCGAGTTGGTCCAAGAGTATGACCACCATCTGGCTGCCGTCAACACTCTT
ACTTTCGTTGATGACAACCGCCGCTTCATCTCCACCTCAGATGACAAGTCGCTGCGCGCTTGGGAATACGGCATT
CCTGTCCCGATTAAGTTCATCGCAGAGCCCTACATGTTCGCGCTCACGCGTGCGGCGCCCCATCCGAATGGCAAG
TATGTCGCCTTCCAGTCAGGCGACAACCAGATTGTCGTCTACAGCGCGACGGACAAGTTCCGCCAGAACCGAAAG
AAGCGCTTCGTTGGGCATAATACTTCCGGATACGCTATCGACCTCAAGATCTCACCTGATGGTCAGTTCCTTGTT
TCCGGTGACAGCGGTGGTTATGTCTGCTTCTGGGACTGGAAGACCGGCAAGATGTATCATAAGATCCAGGCTGGT
GGAAAGGAAGGTGGGGCTATTACTTGTGTGGACTGGCATCCCCATGAGTCCAGTAAGGTCGTCACTGGTGGATTG
GACGGTGTTATCAGGTATTGGGATTAA
Transcript >Pro_DTO377G3_2|g3080.t1
ATGTCCGCCTTACTAGGTCTTGGTTATGACTCCAGCGATGATGATGACGCCACAGCTATGCCCTCGTCTGTGACG
ACCGCGACCAAGGTCGTTGCTGCACCAGAGGTCAATACAGAGGACCAAGCGCATATGCAGATGGCCCTCGCCAAC
GCCTCATCCCAAGCCCTCACCTACAATGCCACATACGATGATCTTACAAAGCCTTCCCAGGGCCCTGTGAACCCG
TTCAAGCCAGCAGGTCCGGGAAACGGTATCAAAAGAAAGAATGTTCCGACTGGATTTGCTGAAGAAGCAGCCATC
AGCGAGTCCACATTTTCTGCGCAACATCGCACGTTCCAAAGTCTGGGATACACTCGCAATCCGACACTACCGGAC
CAATTTATCGGAAGCCTCGAAAATGCGGCACAATATGGAGGCCGGGATATTGTACAAATTAAGCCGACTAAGAGC
GCGTCCGCAAACTGGCGGACAAAGCGGCAAAAGAAGGGCGACTCCAGTGTTGTGGAGGGAGAGGGCGCATATCTG
GGACCCTGGGCGAAATACCAAAATGACCAGCAATATGACTACGTGGAGGTTGCTGAAGGAGAAGAGCGCGCGCTT
GGTAGTGACGAGGAATATATCGAAGAGGAAGACGAGACTCTGACTACCACGGCACCTATGCCGGCCATGAGTAAG
GATGCCACCGCTTACGAAGGTGATCTTGCCACGCAAGAAACCACCGAGTTTCACGGATCAGAGCAGTACGACTAC
CAGGGCCGGACGTACATGCACGTGCCTCAGGACTTGGATATCGATTTGCGCAAAGAGCCCGGCACCACCAAGAAC
TACGTACCCAAAAAACTCGTGCAAACTTGGAAATCGCACACCAAGCCGATCACCTCTCTTCGATTCATCCCCAAA
TCTGGCCACTTGCTGCTTTCATCAGCAGCCGATGGGAAAGCCAAGCTCTGGGATGTGTATCACTCTCGGGAACTC
TTGCGGACTTTCTCCGGCCACACCAAAGCAATCTCAGACACAGATTTCCATCCATCGGGGACGACCTTCCTTACC
GGGTCATACGACCGACAGATCAAGCTCTGGGATACCGAATACGGTAAATGTCTTGGCCGGTTTTCCACAGGCAAG
ACACCGCACGTTGTCCGCTTCAACCCTAGCCCAGAACACTCACACGAGTTCCTGGCCGGTATGTCTGACAAGAAG
ATTGTGCAATTCGACACCCGGTCCGGCGAGTTGGTCCAAGAGTATGACCACCATCTGGCTGCCGTCAACACTCTT
ACTTTCGTTGATGACAACCGCCGCTTCATCTCCACCTCAGATGACAAGTCGCTGCGCGCTTGGGAATACGGCATT
CCTGTCCCGATTAAGTTCATCGCAGAGCCCTACATGTTCGCGCTCACGCGTGCGGCGCCCCATCCGAATGGCAAG
TATGTCGCCTTCCAGTCAGGCGACAACCAGATTGTCGTCTACAGCGCGACGGACAAGTTCCGCCAGAACCGAAAG
AAGCGCTTCGTTGGGCATAATACTTCCGGATACGCTATCGACCTCAAGATCTCACCTGATGGTCAGTTCCTTGTT
TCCGGTGACAGCGGTGGTTATGTCTGCTTCTGGGACTGGAAGACCGGCAAGATGTATCATAAGATCCAGGCTGGT
GGAAAGGAAGGTGGGGCTATTACTTGTGTGGACTGGCATCCCCATGAGTCCAGTAAGGTCGTCACTGGTGGATTG
GACGGTGTTATCAGGTATTGGGATTAA
Gene >Pro_DTO377G3_2|g3080.t1
ATGTCCGCCTTACTAGGTCTTGGTTATGACTCCAGCGATGATGATGACGCCACAGCTATGCCCTCGTCTGTGACG
ACCGCGACCAAGGTCGTTGCTGCACCAGAGGTCAATACAGAGGTTTGGTCCCCCCATAATCATCCTCCTTCCCGA
ATCTCTTTGTGCCTTACACTTGAGCTATGACGAACAGATAAGACTAACGATCCTACAGGACCAAGCGCATATGCA
GATGGCCCTCGCCAACGCCTCATCCCAAGCCCTCACCTACAATGCCACATACGATGATCTTACAAAGCCTTCCCA
GGGCCCTGTGAACCCGTTCAAGCCAGCAGGTCCGGGAAACGGTATCAAAAGAAAGAATGTTCCGACTGGATTTGC
TGAAGAAGCAGCCATCAGCGAGTCCACATTTTCTGCGCAACATCGCACGTTCCAAAGTCTGGGATACACTCGCAA
TCCGACACTACCGGACCAATTTATCGGAAGCCTCGAAAATGCGGCACAATATGGAGGCCGGGATATTGTACAAAT
TAAGCCGACTAAGAGCGCGTCCGCAAACTGGCGGACAAAGCGGCAAAAGAAGGGCGACTCCAGTGTTGTGGAGGG
AGAGGGCGCATATCTGGGACCCTGGGCGAAATACCAAAATGACCAGCAATATGACTACGTGGAGGTTGCTGAAGG
AGAAGAGCGCGCGCTTGGTAGTGACGAGGAATATATCGAAGAGGAAGACGAGACTCTGACTACCACGGCACCTAT
GCCGGCCATGAGTAAGGATGCCACCGCTTACGAAGGTGATCTTGCCACGCAAGAAACCACCGAGTTTCACGGATC
AGAGCAGTACGACTACCAGGGCCGGACGTACATGCACGTGCCTCAGGACTTGGATATCGATTTGCGCAAAGAGCC
CGGCACCACCAAGAACTACGTACCCAAAAAACTCGTGCAAACTTGGAAATCGCACACCAAGCCGATCACCTCTCT
TCGATTCATCCCCAAATCTGGCCACTTGCTGCTTTCATCAGCAGCCGATGGGAAAGCCAAGCTCTGGGATGTGTA
TCACTCTCGGGAACTCTTGCGGACTTTCTCCGGCCACACCAAAGCAATCTCAGACACAGATTTCCATCCATCGGG
GACGACCTTCCTTACCGGGTCATACGACCGACAGATCAAGCTCTGGGATACCGAATACGGTAAATGTCTTGGCCG
GTTTTCCACAGGCAAGACACCGCACGTTGTCCGCTTCAACCCTAGCCCAGAACACTCACACGAGTTCCTGGCCGG
TATGTCTGACAAGAAGATTGTGCAATTCGACACCCGGTCCGGCGAGTTGGTCCAAGAGTATGACCACCATCTGGC
TGCCGTCAACACTCTTACTTTCGTTGATGACAACCGCCGCTTCATCTCCACCTCAGATGACAAGTCGCTGCGCGC
TTGGGAATACGGCATTCCTGTCCCGATTAAGTTCATCGCAGAGCCCTACATGTTCGCGCTCACGCGTGCGGCGCC
CCATCCGAATGGCAAGTATGTCGCCTTCCAGTCAGGCGACAACCAGATTGTCGTCTACAGCGCGACGGACAAGTT
CCGCCAGAACCGAAAGAAGCGCTTCGTTGGGCATAATACTTCCGGATACGCTATCGACCTCAAGATCTCACCTGA
TGGTCAGTTCCTTGTTTCCGGTGACAGCGGTGGTTATGTCTGCTTCTGGGACTGGAAGACCGGCAAGATGTATCA
TAAGATCCAGGCTGGTGGAAAGGAAGGTGGGGCTATTACTTGTGTGGACTGGCATCCCCATGAGTCCAGTAAGGT
CGTCACTGGTGGATTGGACGGTGTTATCAGGTATTGGGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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