Protein ID | Pro_DTO377G3_2|g3080.t1 |
Gene name | |
Location | scaffold_04:653606..655449 |
Strand | - |
Gene length (bp) | 1843 |
Transcript length (bp) | 1752 |
Coding sequence length (bp) | 1752 |
Protein length (aa) | 584 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00400 | WD40 | WD domain, G-beta repeat | 6.3E-04 | 280 | 318 |
PF00400 | WD40 | WD domain, G-beta repeat | 3.2E-08 | 324 | 361 |
PF00400 | WD40 | WD domain, G-beta repeat | 9.1E-02 | 409 | 446 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.1E-03 | 502 | 537 |
PF00400 | WD40 | WD domain, G-beta repeat | 4.9E-03 | 555 | 583 |
PF12894 | ANAPC4_WD40 | Anaphase-promoting complex subunit 4 WD40 domain | 1.5E-05 | 495 | 563 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g3080.t1 MSALLGLGYDSSDDDDATAMPSSVTTATKVVAAPEVNTEDQAHMQMALANASSQALTYNATYDDLTKPSQGPVNP FKPAGPGNGIKRKNVPTGFAEEAAISESTFSAQHRTFQSLGYTRNPTLPDQFIGSLENAAQYGGRDIVQIKPTKS ASANWRTKRQKKGDSSVVEGEGAYLGPWAKYQNDQQYDYVEVAEGEERALGSDEEYIEEEDETLTTTAPMPAMSK DATAYEGDLATQETTEFHGSEQYDYQGRTYMHVPQDLDIDLRKEPGTTKNYVPKKLVQTWKSHTKPITSLRFIPK SGHLLLSSAADGKAKLWDVYHSRELLRTFSGHTKAISDTDFHPSGTTFLTGSYDRQIKLWDTEYGKCLGRFSTGK TPHVVRFNPSPEHSHEFLAGMSDKKIVQFDTRSGELVQEYDHHLAAVNTLTFVDDNRRFISTSDDKSLRAWEYGI PVPIKFIAEPYMFALTRAAPHPNGKYVAFQSGDNQIVVYSATDKFRQNRKKRFVGHNTSGYAIDLKISPDGQFLV SGDSGGYVCFWDWKTGKMYHKIQAGGKEGGAITCVDWHPHESSKVVTGGLDGVIRYWD* |
Coding | >Pro_DTO377G3_2|g3080.t1 ATGTCCGCCTTACTAGGTCTTGGTTATGACTCCAGCGATGATGATGACGCCACAGCTATGCCCTCGTCTGTGACG ACCGCGACCAAGGTCGTTGCTGCACCAGAGGTCAATACAGAGGACCAAGCGCATATGCAGATGGCCCTCGCCAAC GCCTCATCCCAAGCCCTCACCTACAATGCCACATACGATGATCTTACAAAGCCTTCCCAGGGCCCTGTGAACCCG TTCAAGCCAGCAGGTCCGGGAAACGGTATCAAAAGAAAGAATGTTCCGACTGGATTTGCTGAAGAAGCAGCCATC AGCGAGTCCACATTTTCTGCGCAACATCGCACGTTCCAAAGTCTGGGATACACTCGCAATCCGACACTACCGGAC CAATTTATCGGAAGCCTCGAAAATGCGGCACAATATGGAGGCCGGGATATTGTACAAATTAAGCCGACTAAGAGC GCGTCCGCAAACTGGCGGACAAAGCGGCAAAAGAAGGGCGACTCCAGTGTTGTGGAGGGAGAGGGCGCATATCTG GGACCCTGGGCGAAATACCAAAATGACCAGCAATATGACTACGTGGAGGTTGCTGAAGGAGAAGAGCGCGCGCTT GGTAGTGACGAGGAATATATCGAAGAGGAAGACGAGACTCTGACTACCACGGCACCTATGCCGGCCATGAGTAAG GATGCCACCGCTTACGAAGGTGATCTTGCCACGCAAGAAACCACCGAGTTTCACGGATCAGAGCAGTACGACTAC CAGGGCCGGACGTACATGCACGTGCCTCAGGACTTGGATATCGATTTGCGCAAAGAGCCCGGCACCACCAAGAAC TACGTACCCAAAAAACTCGTGCAAACTTGGAAATCGCACACCAAGCCGATCACCTCTCTTCGATTCATCCCCAAA TCTGGCCACTTGCTGCTTTCATCAGCAGCCGATGGGAAAGCCAAGCTCTGGGATGTGTATCACTCTCGGGAACTC TTGCGGACTTTCTCCGGCCACACCAAAGCAATCTCAGACACAGATTTCCATCCATCGGGGACGACCTTCCTTACC GGGTCATACGACCGACAGATCAAGCTCTGGGATACCGAATACGGTAAATGTCTTGGCCGGTTTTCCACAGGCAAG ACACCGCACGTTGTCCGCTTCAACCCTAGCCCAGAACACTCACACGAGTTCCTGGCCGGTATGTCTGACAAGAAG ATTGTGCAATTCGACACCCGGTCCGGCGAGTTGGTCCAAGAGTATGACCACCATCTGGCTGCCGTCAACACTCTT ACTTTCGTTGATGACAACCGCCGCTTCATCTCCACCTCAGATGACAAGTCGCTGCGCGCTTGGGAATACGGCATT CCTGTCCCGATTAAGTTCATCGCAGAGCCCTACATGTTCGCGCTCACGCGTGCGGCGCCCCATCCGAATGGCAAG TATGTCGCCTTCCAGTCAGGCGACAACCAGATTGTCGTCTACAGCGCGACGGACAAGTTCCGCCAGAACCGAAAG AAGCGCTTCGTTGGGCATAATACTTCCGGATACGCTATCGACCTCAAGATCTCACCTGATGGTCAGTTCCTTGTT TCCGGTGACAGCGGTGGTTATGTCTGCTTCTGGGACTGGAAGACCGGCAAGATGTATCATAAGATCCAGGCTGGT GGAAAGGAAGGTGGGGCTATTACTTGTGTGGACTGGCATCCCCATGAGTCCAGTAAGGTCGTCACTGGTGGATTG GACGGTGTTATCAGGTATTGGGATTAA |
Transcript | >Pro_DTO377G3_2|g3080.t1 ATGTCCGCCTTACTAGGTCTTGGTTATGACTCCAGCGATGATGATGACGCCACAGCTATGCCCTCGTCTGTGACG ACCGCGACCAAGGTCGTTGCTGCACCAGAGGTCAATACAGAGGACCAAGCGCATATGCAGATGGCCCTCGCCAAC GCCTCATCCCAAGCCCTCACCTACAATGCCACATACGATGATCTTACAAAGCCTTCCCAGGGCCCTGTGAACCCG TTCAAGCCAGCAGGTCCGGGAAACGGTATCAAAAGAAAGAATGTTCCGACTGGATTTGCTGAAGAAGCAGCCATC AGCGAGTCCACATTTTCTGCGCAACATCGCACGTTCCAAAGTCTGGGATACACTCGCAATCCGACACTACCGGAC CAATTTATCGGAAGCCTCGAAAATGCGGCACAATATGGAGGCCGGGATATTGTACAAATTAAGCCGACTAAGAGC GCGTCCGCAAACTGGCGGACAAAGCGGCAAAAGAAGGGCGACTCCAGTGTTGTGGAGGGAGAGGGCGCATATCTG GGACCCTGGGCGAAATACCAAAATGACCAGCAATATGACTACGTGGAGGTTGCTGAAGGAGAAGAGCGCGCGCTT GGTAGTGACGAGGAATATATCGAAGAGGAAGACGAGACTCTGACTACCACGGCACCTATGCCGGCCATGAGTAAG GATGCCACCGCTTACGAAGGTGATCTTGCCACGCAAGAAACCACCGAGTTTCACGGATCAGAGCAGTACGACTAC CAGGGCCGGACGTACATGCACGTGCCTCAGGACTTGGATATCGATTTGCGCAAAGAGCCCGGCACCACCAAGAAC TACGTACCCAAAAAACTCGTGCAAACTTGGAAATCGCACACCAAGCCGATCACCTCTCTTCGATTCATCCCCAAA TCTGGCCACTTGCTGCTTTCATCAGCAGCCGATGGGAAAGCCAAGCTCTGGGATGTGTATCACTCTCGGGAACTC TTGCGGACTTTCTCCGGCCACACCAAAGCAATCTCAGACACAGATTTCCATCCATCGGGGACGACCTTCCTTACC GGGTCATACGACCGACAGATCAAGCTCTGGGATACCGAATACGGTAAATGTCTTGGCCGGTTTTCCACAGGCAAG ACACCGCACGTTGTCCGCTTCAACCCTAGCCCAGAACACTCACACGAGTTCCTGGCCGGTATGTCTGACAAGAAG ATTGTGCAATTCGACACCCGGTCCGGCGAGTTGGTCCAAGAGTATGACCACCATCTGGCTGCCGTCAACACTCTT ACTTTCGTTGATGACAACCGCCGCTTCATCTCCACCTCAGATGACAAGTCGCTGCGCGCTTGGGAATACGGCATT CCTGTCCCGATTAAGTTCATCGCAGAGCCCTACATGTTCGCGCTCACGCGTGCGGCGCCCCATCCGAATGGCAAG TATGTCGCCTTCCAGTCAGGCGACAACCAGATTGTCGTCTACAGCGCGACGGACAAGTTCCGCCAGAACCGAAAG AAGCGCTTCGTTGGGCATAATACTTCCGGATACGCTATCGACCTCAAGATCTCACCTGATGGTCAGTTCCTTGTT TCCGGTGACAGCGGTGGTTATGTCTGCTTCTGGGACTGGAAGACCGGCAAGATGTATCATAAGATCCAGGCTGGT GGAAAGGAAGGTGGGGCTATTACTTGTGTGGACTGGCATCCCCATGAGTCCAGTAAGGTCGTCACTGGTGGATTG GACGGTGTTATCAGGTATTGGGATTAA |
Gene | >Pro_DTO377G3_2|g3080.t1 ATGTCCGCCTTACTAGGTCTTGGTTATGACTCCAGCGATGATGATGACGCCACAGCTATGCCCTCGTCTGTGACG ACCGCGACCAAGGTCGTTGCTGCACCAGAGGTCAATACAGAGGTTTGGTCCCCCCATAATCATCCTCCTTCCCGA ATCTCTTTGTGCCTTACACTTGAGCTATGACGAACAGATAAGACTAACGATCCTACAGGACCAAGCGCATATGCA GATGGCCCTCGCCAACGCCTCATCCCAAGCCCTCACCTACAATGCCACATACGATGATCTTACAAAGCCTTCCCA GGGCCCTGTGAACCCGTTCAAGCCAGCAGGTCCGGGAAACGGTATCAAAAGAAAGAATGTTCCGACTGGATTTGC TGAAGAAGCAGCCATCAGCGAGTCCACATTTTCTGCGCAACATCGCACGTTCCAAAGTCTGGGATACACTCGCAA TCCGACACTACCGGACCAATTTATCGGAAGCCTCGAAAATGCGGCACAATATGGAGGCCGGGATATTGTACAAAT TAAGCCGACTAAGAGCGCGTCCGCAAACTGGCGGACAAAGCGGCAAAAGAAGGGCGACTCCAGTGTTGTGGAGGG AGAGGGCGCATATCTGGGACCCTGGGCGAAATACCAAAATGACCAGCAATATGACTACGTGGAGGTTGCTGAAGG AGAAGAGCGCGCGCTTGGTAGTGACGAGGAATATATCGAAGAGGAAGACGAGACTCTGACTACCACGGCACCTAT GCCGGCCATGAGTAAGGATGCCACCGCTTACGAAGGTGATCTTGCCACGCAAGAAACCACCGAGTTTCACGGATC AGAGCAGTACGACTACCAGGGCCGGACGTACATGCACGTGCCTCAGGACTTGGATATCGATTTGCGCAAAGAGCC CGGCACCACCAAGAACTACGTACCCAAAAAACTCGTGCAAACTTGGAAATCGCACACCAAGCCGATCACCTCTCT TCGATTCATCCCCAAATCTGGCCACTTGCTGCTTTCATCAGCAGCCGATGGGAAAGCCAAGCTCTGGGATGTGTA TCACTCTCGGGAACTCTTGCGGACTTTCTCCGGCCACACCAAAGCAATCTCAGACACAGATTTCCATCCATCGGG GACGACCTTCCTTACCGGGTCATACGACCGACAGATCAAGCTCTGGGATACCGAATACGGTAAATGTCTTGGCCG GTTTTCCACAGGCAAGACACCGCACGTTGTCCGCTTCAACCCTAGCCCAGAACACTCACACGAGTTCCTGGCCGG TATGTCTGACAAGAAGATTGTGCAATTCGACACCCGGTCCGGCGAGTTGGTCCAAGAGTATGACCACCATCTGGC TGCCGTCAACACTCTTACTTTCGTTGATGACAACCGCCGCTTCATCTCCACCTCAGATGACAAGTCGCTGCGCGC TTGGGAATACGGCATTCCTGTCCCGATTAAGTTCATCGCAGAGCCCTACATGTTCGCGCTCACGCGTGCGGCGCC CCATCCGAATGGCAAGTATGTCGCCTTCCAGTCAGGCGACAACCAGATTGTCGTCTACAGCGCGACGGACAAGTT CCGCCAGAACCGAAAGAAGCGCTTCGTTGGGCATAATACTTCCGGATACGCTATCGACCTCAAGATCTCACCTGA TGGTCAGTTCCTTGTTTCCGGTGACAGCGGTGGTTATGTCTGCTTCTGGGACTGGAAGACCGGCAAGATGTATCA TAAGATCCAGGCTGGTGGAAAGGAAGGTGGGGCTATTACTTGTGTGGACTGGCATCCCCATGAGTCCAGTAAGGT CGTCACTGGTGGATTGGACGGTGTTATCAGGTATTGGGATTAA |