Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3077.t1
Gene name
Locationscaffold_04:647609..649502
Strand-
Gene length (bp)1893
Transcript length (bp)1653
Coding sequence length (bp)1653
Protein length (aa) 551

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.3E-43 64 463
PF00083 Sugar_tr Sugar (and other) transporter 9.8E-14 93 231

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No
GO:0051179 localization No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 93 112 19
3 125 142 17
4 152 174 22
5 181 203 22
6 208 230 22
7 251 268 17
8 278 300 22
9 321 343 22
10 353 375 22
11 382 404 22
12 419 441 22
13 453 475 22
14 526 543 17

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 10.44 4.58 16.30
5d_25C Five days - 25 degrees Celsius 7.88 3.10 12.66
7d_25C Seven days - 25 degrees Celsius 9.98 4.36 15.60
10d_25C Ten days - 25 degrees Celsius 8.31 3.43 13.20
7d_15C Seven days - 15 degrees Celsius 18.88 9.72 28.03
7d_30C Seven days - 30 degrees Celsius 9.82 4.11 15.53

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.455910 no
3d_25C 7d_25C 0.926222 no
3d_25C 7d_15C 0.032838 yes
3d_25C 7d_30C 0.899884 no
3d_25C 10d_25C 0.554074 no
5d_25C 7d_25C 0.531580 no
5d_25C 7d_15C 0.002761 yes
5d_25C 7d_30C 0.584147 no
5d_25C 10d_25C 0.917705 no
7d_25C 7d_15C 0.019624 yes
7d_25C 7d_30C 0.974390 no
7d_25C 10d_25C 0.651416 no
7d_15C 7d_30C 0.021921 yes
7d_15C 10d_25C 0.002297 yes
7d_30C 10d_25C 0.699528 no

Orthologs

Orthofinder run ID2
Orthogroup2343
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g2769.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g2226.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g1545.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g4236.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g2276.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g1784.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g5082.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g9047.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g2849.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g2038.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g7288.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g7318.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g4029.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g7521.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g4681.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g3814.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g1791.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g1073.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g5352.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g9053.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g1878.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g2612.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g6946.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g2868.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g4602.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g4194.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g8296.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g5804.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g3914.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g2528.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g946.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g2704.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g1971.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g3077.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3077.t1
MAPETSPTENSPLLGSVSVNGAVSNGTIPDHHVESGDTVQAEERRKESSNDAQKQLKYIVPAISLGIFLSAADQT
IIMASYGQIGSDLKALNLTSWIATSYFLTLTSFQPLYGKLSDIFGRKPCLLFAYAVFGLGCLGCGLARDINELIA
ARVFQGIGGGGMTTVVSILMSDIVPLRDRGLWQGIINIIYATGAGTGAPLGGILSDYIGWRWAFLAQFPLCIIAF
IAVSFLLKLPPRDSAHWKTKLRRIDFLGAVVLVGAVLGFLVGLDRGSNVSWRLPLTIASLAVSAVLFVVFILVEI
YLAAEPFAPGHIIFNRTFFACYSCNFFSFGGWIAALFYIPLYFQAVDDVSATTAGLRLLPSILAGVTGSVFAGLL
MKWSGKYYWLTIAAYASLTTGVFCIYLFSGGVVASTVPMICGMVISAFGNGIGVTTTLIGLISNATYEDQAVVTA
CSYLFRSLGSVIGLSLSSTVVQQVLRNRLQSGLRDSKNIDQIVEGVRESLDFIKTLDPATARIVRDSYGWSTNKG
FAFLVFVVFFALLSSCFIRESKLNR*
Coding >Pro_DTO377G3_2|g3077.t1
ATGGCTCCAGAGACATCTCCTACCGAGAACTCCCCGTTGCTGGGATCCGTATCTGTTAACGGCGCTGTGTCCAAC
GGCACGATTCCCGATCATCATGTGGAATCAGGGGATACAGTTCAAGCAGAGGAGCGAAGAAAAGAGTCGTCCAAT
GACGCACAGAAGCAGCTCAAATATATTGTGCCTGCCATCTCGCTCGGAATTTTCTTGTCGGCGGCAGACCAGACA
ATTATCATGGCCAGTTATGGTCAGATTGGTAGCGACTTGAAAGCTCTCAACCTGACCAGTTGGATTGCTACTTCT
TACTTTCTCACTTTAACATCATTCCAACCTCTATATGGCAAGCTAAGCGACATATTTGGTCGCAAGCCGTGCCTC
CTCTTTGCATATGCGGTTTTCGGCCTTGGATGCTTGGGCTGCGGTTTAGCTCGGGATATTAATGAGTTGATCGCT
GCTCGTGTCTTCCAAGGCATTGGTGGTGGTGGTATGACCACCGTCGTAAGCATTTTGATGAGTGATATTGTTCCT
CTTCGCGATCGAGGCCTATGGCAGGGTATTATCAATATCATCTATGCCACAGGTGCCGGTACCGGTGCACCCTTG
GGTGGAATTCTCTCCGACTACATTGGCTGGCGCTGGGCGTTTCTAGCGCAATTCCCCCTCTGCATTATTGCTTTC
ATTGCCGTGTCTTTCCTGCTCAAGCTGCCTCCTCGCGATAGCGCCCATTGGAAGACCAAGCTGCGTCGCATCGAC
TTCCTTGGCGCCGTAGTCCTTGTTGGCGCTGTTCTTGGTTTCCTAGTTGGTCTTGATCGTGGCAGTAATGTGTCA
TGGAGATTACCCCTGACAATTGCCTCGCTAGCTGTCTCTGCTGTCTTGTTCGTGGTCTTTATCTTAGTTGAGATC
TACCTAGCAGCCGAACCCTTTGCGCCTGGTCACATCATCTTCAACCGAACATTCTTTGCTTGCTACAGCTGCAAC
TTCTTCAGCTTCGGGGGATGGATTGCCGCCCTGTTCTATATTCCATTATACTTCCAAGCAGTAGATGATGTCTCT
GCCACGACTGCGGGACTGCGCTTACTGCCAAGCATTCTAGCTGGTGTCACTGGGTCCGTGTTTGCGGGCTTGTTG
ATGAAATGGTCTGGCAAGTATTACTGGCTGACAATTGCTGCGTATGCTTCCCTGACAACTGGTGTGTTCTGTATA
TACCTGTTCTCCGGTGGTGTGGTGGCTAGTACAGTCCCGATGATCTGCGGGATGGTGATTTCGGCATTCGGCAAT
GGCATTGGTGTCACTACAACTTTGATCGGTTTGATATCGAATGCTACATATGAAGATCAGGCGGTCGTCACTGCT
TGCTCATATCTATTCCGCTCATTGGGATCCGTGATTGGTCTCTCTTTATCATCAACTGTCGTTCAGCAAGTCTTA
CGGAATCGATTGCAATCAGGTCTACGTGACAGTAAGAACATTGATCAAATTGTCGAAGGAGTGCGAGAAAGTCTG
GACTTTATCAAAACGCTCGACCCAGCAACTGCCAGGATTGTCCGGGACTCGTATGGCTGGTCCACCAACAAGGGA
TTCGCCTTTTTGGTTTTTGTCGTGTTCTTCGCTTTGTTAAGCAGCTGTTTCATCCGTGAAAGCAAACTCAACCGC
TAA
Transcript >Pro_DTO377G3_2|g3077.t1
ATGGCTCCAGAGACATCTCCTACCGAGAACTCCCCGTTGCTGGGATCCGTATCTGTTAACGGCGCTGTGTCCAAC
GGCACGATTCCCGATCATCATGTGGAATCAGGGGATACAGTTCAAGCAGAGGAGCGAAGAAAAGAGTCGTCCAAT
GACGCACAGAAGCAGCTCAAATATATTGTGCCTGCCATCTCGCTCGGAATTTTCTTGTCGGCGGCAGACCAGACA
ATTATCATGGCCAGTTATGGTCAGATTGGTAGCGACTTGAAAGCTCTCAACCTGACCAGTTGGATTGCTACTTCT
TACTTTCTCACTTTAACATCATTCCAACCTCTATATGGCAAGCTAAGCGACATATTTGGTCGCAAGCCGTGCCTC
CTCTTTGCATATGCGGTTTTCGGCCTTGGATGCTTGGGCTGCGGTTTAGCTCGGGATATTAATGAGTTGATCGCT
GCTCGTGTCTTCCAAGGCATTGGTGGTGGTGGTATGACCACCGTCGTAAGCATTTTGATGAGTGATATTGTTCCT
CTTCGCGATCGAGGCCTATGGCAGGGTATTATCAATATCATCTATGCCACAGGTGCCGGTACCGGTGCACCCTTG
GGTGGAATTCTCTCCGACTACATTGGCTGGCGCTGGGCGTTTCTAGCGCAATTCCCCCTCTGCATTATTGCTTTC
ATTGCCGTGTCTTTCCTGCTCAAGCTGCCTCCTCGCGATAGCGCCCATTGGAAGACCAAGCTGCGTCGCATCGAC
TTCCTTGGCGCCGTAGTCCTTGTTGGCGCTGTTCTTGGTTTCCTAGTTGGTCTTGATCGTGGCAGTAATGTGTCA
TGGAGATTACCCCTGACAATTGCCTCGCTAGCTGTCTCTGCTGTCTTGTTCGTGGTCTTTATCTTAGTTGAGATC
TACCTAGCAGCCGAACCCTTTGCGCCTGGTCACATCATCTTCAACCGAACATTCTTTGCTTGCTACAGCTGCAAC
TTCTTCAGCTTCGGGGGATGGATTGCCGCCCTGTTCTATATTCCATTATACTTCCAAGCAGTAGATGATGTCTCT
GCCACGACTGCGGGACTGCGCTTACTGCCAAGCATTCTAGCTGGTGTCACTGGGTCCGTGTTTGCGGGCTTGTTG
ATGAAATGGTCTGGCAAGTATTACTGGCTGACAATTGCTGCGTATGCTTCCCTGACAACTGGTGTGTTCTGTATA
TACCTGTTCTCCGGTGGTGTGGTGGCTAGTACAGTCCCGATGATCTGCGGGATGGTGATTTCGGCATTCGGCAAT
GGCATTGGTGTCACTACAACTTTGATCGGTTTGATATCGAATGCTACATATGAAGATCAGGCGGTCGTCACTGCT
TGCTCATATCTATTCCGCTCATTGGGATCCGTGATTGGTCTCTCTTTATCATCAACTGTCGTTCAGCAAGTCTTA
CGGAATCGATTGCAATCAGGTCTACGTGACAGTAAGAACATTGATCAAATTGTCGAAGGAGTGCGAGAAAGTCTG
GACTTTATCAAAACGCTCGACCCAGCAACTGCCAGGATTGTCCGGGACTCGTATGGCTGGTCCACCAACAAGGGA
TTCGCCTTTTTGGTTTTTGTCGTGTTCTTCGCTTTGTTAAGCAGCTGTTTCATCCGTGAAAGCAAACTCAACCGC
TAA
Gene >Pro_DTO377G3_2|g3077.t1
ATGGCTCCAGAGACATCTCCTACCGAGAACTCCCCGTTGCTGGGATCCGTATCTGTTAACGGCGCTGTGTCCAAC
GGCACGATTCCCGATCATCATGTGGAATCAGGGGATACAGTTCAAGCAGAGGAGCGAAGAAAAGAGTCGTCCAAT
GACGCACAGAAGCAGCTCAAATATATTGTGCCTGCCATCTCGCTCGGAGTATGGATTCTTCCAATGTTTATTGAT
TCTGTTTTCTGAAATCGAAGTTGTGACTAACGGGATATATAGATTTTCTTGTCGGCGGCAGACCAGACAATTATC
ATGGCCAGTTATGGTCAGATTGGTAGCGACTTGAAAGCTCTCAACCTGACCAGTTGGATTGCTACTTCTTACTTT
CTCACTTTAACATCATTCCAACCTCTATATGGCAAGCTAAGCGACATATTTGGTCGCAAGCCGTGCCTCCTCTTT
GCATATGCGGTTTTCGGCCTTGGATGCTTGGGCTGCGGTTTAGCTCGGGATATTAATGAGTTGATCGCTGCTCGT
GTATGTTCACATATGATCTCAGGTCTGAATCATGTAATGCTGACTATTTCGAACAGGTCTTCCAAGGCATTGGTG
GTGGTGGTATGACCACCGTCGTAAGCATTTTGATGAGTGATATTGTTCCTCTTCGCGATCGAGGCCTATGGCAGG
GTATTATCAATATCATCTATGCCACAGGTGCCGGTACCGGTGCACCCTTGGGTGGAATTCTCTCCGACTACATTG
GCTGGCGCTGGTATGAATGATGCGAGACCCACATTTCCTTGCGCCATCTGACGTTTTTTTACTTAGGGCGTTTCT
AGCGCAATTCCCCCTCTGCATTATTGCTTTCATTGCCGTGTCTTTCCTGCTCAAGCTGCCTCCTCGCGATAGCGC
CCATTGGAAGACCAAGCTGCGTCGCATCGACTTCCTTGGCGCCGTAGTCCTTGTTGGCGCTGTTCTTGGTTTCCT
AGTTGGTCTTGATCGTGGCAGTAATGTGTCATGGAGATTACCCCTGACAATTGCCTCGCTAGCTGTCTCTGCTGT
CTTGTTCGTGGTCTTTATCTTAGTTGAGATCTACCTAGCAGCCGAACCCTTTGCGCCTGGTCACATCATCTTCAA
CCGAACATTCTTTGCTTGCTACAGCTGCAACTTCTTCAGCTTCGGGGGATGGATTGCCGCCCTGTTCTATATTCC
ATTATACTTCCAAGCAGTAGATGATGTCTCTGCCACGACTGCGGGACTGCGCTTACTGCCAAGCATTCTAGCTGG
TGTCACTGGGTCCGTGTTTGCGGGCTTGTTGATGAAATGGTCTGGCAAGTATTACTGGCTGACAATTGCTGCGTA
TGCTTCCCTGACAACTGGTGTGTTCTGTATATACCTGTTCTCCGGTGGTGTGGTGGCTAGTACAGTCCCGATGAT
CTGCGGGATGGTGATTTCGGCATTCGGCAATGGCATTGGTGTCACTACAACTTTGATCGGTTTGAGTGAGTTTTT
ATCTGATCTTGCTCTGCAATCCTTCAATATATGCTAACCAATCCGCCAGTATCGAATGCTACATATGAAGATCAG
GCGGTCGTCACTGCTTGCTCATATCTATTCCGCTCATTGGGATCCGTGATTGGTCTCTCTTTATCATCAACTGTC
GTTCAGCAAGTCTTACGGAATCGATTGCAATCAGGTCTACGTGACAGTAAGAACATTGATCAAATTGTCGAAGGA
GTGCGAGAAAGTCTGGACTTTATCAAAACGCTCGACCCAGCAACTGCCAGGATTGTCCGGGACTCGTATGGCTGG
TCCACCAACAAGGGATTCGCCTTTTTGGTTTTTGTCGTGTTCTTCGCTTTGTTAAGCAGCTGTTTCATCCGTGAA
AGCAAACTCAACCGCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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