© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g3075.t1 |
| Gene name | |
| Location | scaffold_04:641371..642922 |
| Strand | - |
| Gene length (bp) | 1551 |
| Transcript length (bp) | 1377 |
| Coding sequence length (bp) | 1377 |
| Protein length (aa) | 459 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 2.6E-19 | 51 | 306 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.3E-15 | 58 | 315 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 50 | 70 | 20 |
| 3 | 77 | 94 | 17 |
| 4 | 104 | 126 | 22 |
| 5 | 139 | 161 | 22 |
| 6 | 171 | 193 | 22 |
| 7 | 230 | 252 | 22 |
| 8 | 262 | 283 | 21 |
| 9 | 296 | 315 | 19 |
| 10 | 338 | 360 | 22 |
| 11 | 406 | 425 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g3075.t1 MILERVTRFYRSCLFQIVIVGLVAFCEPGIWTALNNLGAGGNAKPYLNNAANALTYGLMSVGCFLAGGVSNKITA KWTLFIGAAFYTPYAAGLYCNNRYGNEWFLLLAAALCGIGASLLWASEAAIAVGYPEEEKRGRYVAIWMSIRQMG PLVGGAISLALNVKTSHVGKVTYTTYLGLVAISSLGAPFALLLSQPQDVIRKNGTKIPYMKKTNMSIEARAIWKQ LSNKYMLLLIPVFLAGQFGATYQGNYLTTYFTVRSRALASFLTAVVGASANIVTGLFLDTKFLSRRTRSQVVYIF VAVFVTASWTWNAIVESKLSRMTDPPAFDLGDGPFFNSAFTVYIFFRFFYEMLQTYIYWLMAEIKGAQRDGDIAR TTGILRSWESIGSTIAYAVGTTHWANINQMALGFALWGATVPFTLMAVFGNWNVDELEAEEEEQTDNSSLEAQRV VIDSEGKN* |
| Coding | >Pro_DTO377G3_2|g3075.t1 ATGATTCTCGAACGTGTGACCCGCTTTTACCGGTCATGTCTATTCCAGATTGTCATCGTGGGATTAGTGGCCTTC TGCGAACCCGGTATCTGGACTGCTCTCAATAATCTTGGAGCTGGAGGAAATGCCAAACCTTACCTGAACAATGCC GCCAATGCCCTGACATACGGACTCATGTCCGTTGGCTGTTTCCTTGCTGGCGGTGTCAGCAACAAGATCACTGCG AAATGGACCTTGTTCATCGGAGCCGCATTCTACACACCCTATGCGGCTGGTCTGTACTGCAACAATCGTTATGGC AATGAGTGGTTTCTCTTGCTCGCGGCCGCTCTTTGTGGAATTGGAGCGTCTCTTCTATGGGCTAGTGAGGCTGCC ATTGCAGTCGGGTATCCAGAGGAGGAGAAAAGAGGACGCTACGTGGCAATCTGGATGTCTATCCGCCAGATGGGA CCGCTTGTTGGCGGTGCCATTTCTCTCGCTCTCAATGTCAAGACTTCGCATGTCGGCAAGGTCACCTACACAACA TACTTGGGCCTTGTTGCCATCTCATCCCTCGGCGCTCCATTTGCGTTGCTGTTGTCTCAGCCACAAGACGTTATC AGAAAGAATGGCACCAAGATTCCATACATGAAGAAAACGAACATGTCTATCGAGGCTCGCGCTATCTGGAAGCAG CTTTCGAATAAGTACATGCTGCTACTCATCCCAGTGTTCCTCGCTGGACAGTTTGGTGCAACTTACCAGGGAAAC TATTTGACGACTTACTTCACCGTCCGCTCCAGAGCCCTTGCATCTTTCCTCACAGCCGTGGTCGGCGCCAGCGCC AACATAGTGACGGGCTTATTCCTCGATACAAAGTTTCTGTCACGAAGAACCAGATCCCAAGTTGTATACATATTC GTTGCTGTGTTTGTCACAGCGTCTTGGACATGGAACGCCATCGTCGAGTCGAAACTCTCCCGCATGACCGATCCC CCTGCCTTCGACTTGGGTGATGGCCCCTTCTTCAACTCGGCCTTCACCGTCTATATCTTTTTCCGGTTCTTCTAT GAGATGTTGCAGACATACATTTATTGGTTGATGGCCGAGATCAAGGGAGCGCAGAGAGATGGCGATATCGCCCGA ACAACCGGCATCCTGAGATCATGGGAGTCCATCGGCAGCACGATTGCCTACGCGGTCGGCACAACCCACTGGGCC AACATCAACCAGATGGCGCTGGGATTTGCACTATGGGGTGCTACAGTCCCCTTCACGCTTATGGCGGTGTTTGGC AATTGGAATGTCGACGAGCTCGAGGCGGAGGAAGAGGAACAAACAGACAACAGTAGTCTGGAGGCTCAGAGAGTG GTAATCGATTCCGAGGGGAAGAACTAA |
| Transcript | >Pro_DTO377G3_2|g3075.t1 ATGATTCTCGAACGTGTGACCCGCTTTTACCGGTCATGTCTATTCCAGATTGTCATCGTGGGATTAGTGGCCTTC TGCGAACCCGGTATCTGGACTGCTCTCAATAATCTTGGAGCTGGAGGAAATGCCAAACCTTACCTGAACAATGCC GCCAATGCCCTGACATACGGACTCATGTCCGTTGGCTGTTTCCTTGCTGGCGGTGTCAGCAACAAGATCACTGCG AAATGGACCTTGTTCATCGGAGCCGCATTCTACACACCCTATGCGGCTGGTCTGTACTGCAACAATCGTTATGGC AATGAGTGGTTTCTCTTGCTCGCGGCCGCTCTTTGTGGAATTGGAGCGTCTCTTCTATGGGCTAGTGAGGCTGCC ATTGCAGTCGGGTATCCAGAGGAGGAGAAAAGAGGACGCTACGTGGCAATCTGGATGTCTATCCGCCAGATGGGA CCGCTTGTTGGCGGTGCCATTTCTCTCGCTCTCAATGTCAAGACTTCGCATGTCGGCAAGGTCACCTACACAACA TACTTGGGCCTTGTTGCCATCTCATCCCTCGGCGCTCCATTTGCGTTGCTGTTGTCTCAGCCACAAGACGTTATC AGAAAGAATGGCACCAAGATTCCATACATGAAGAAAACGAACATGTCTATCGAGGCTCGCGCTATCTGGAAGCAG CTTTCGAATAAGTACATGCTGCTACTCATCCCAGTGTTCCTCGCTGGACAGTTTGGTGCAACTTACCAGGGAAAC TATTTGACGACTTACTTCACCGTCCGCTCCAGAGCCCTTGCATCTTTCCTCACAGCCGTGGTCGGCGCCAGCGCC AACATAGTGACGGGCTTATTCCTCGATACAAAGTTTCTGTCACGAAGAACCAGATCCCAAGTTGTATACATATTC GTTGCTGTGTTTGTCACAGCGTCTTGGACATGGAACGCCATCGTCGAGTCGAAACTCTCCCGCATGACCGATCCC CCTGCCTTCGACTTGGGTGATGGCCCCTTCTTCAACTCGGCCTTCACCGTCTATATCTTTTTCCGGTTCTTCTAT GAGATGTTGCAGACATACATTTATTGGTTGATGGCCGAGATCAAGGGAGCGCAGAGAGATGGCGATATCGCCCGA ACAACCGGCATCCTGAGATCATGGGAGTCCATCGGCAGCACGATTGCCTACGCGGTCGGCACAACCCACTGGGCC AACATCAACCAGATGGCGCTGGGATTTGCACTATGGGGTGCTACAGTCCCCTTCACGCTTATGGCGGTGTTTGGC AATTGGAATGTCGACGAGCTCGAGGCGGAGGAAGAGGAACAAACAGACAACAGTAGTCTGGAGGCTCAGAGAGTG GTAATCGATTCCGAGGGGAAGAACTAA |
| Gene | >Pro_DTO377G3_2|g3075.t1 ATGATTCTCGAACGTGTGACCCGCTTTTACCGGTCATGTCTATTCCAGATTGTCATCGTGGGATTAGTGGCCTTC TGCGAACCCGGTATCTGGACTGCTCTCAATAATCTTGGAGCTGGAGGAAATGCCAAAGTAAGTCATCGGAGTGTT GACAATCTGCTCAACTACCGCTAACATATCATTGTGCAGCCTTACCTGAACAATGCCGCCAATGCCCTGACATAC GGACTCATGTCCGTTGGCTGTTTCCTTGCTGGCGGTGTCAGCAACAAGATCACTGCGAAATGGACCTTGTTCATC GGAGCCGCATTCTACACACCCTATGCGGCTGGTCTGTACTGCAACAATCGTTATGGCAATGAGTGGTTTCTCTTG CTCGCGGCCGCTCTTTGTGGAATTGGAGCGTCTCTTCTATGGGCTAGTGAGGCTGCCATTGCAGTCGGGTATCCA GAGGAGGAGAAAAGAGGACGGTAAGTCGAGACTCCCGGACCATGCAGTTGTGTATCCGACTGACCTTTTTATGTT AGCTACGTGGCAATCTGGATGTCTATCCGCCAGATGGGACCGCTTGTTGGCGGTGCCATTTCTCTCGCTCTCAAT GTCAAGACTTCGCATGTCGGCAAGGTCACCTACACAACATACTTGGGCCTTGTTGCCATCTCATCCCTCGGCGCT CCATTTGCGTTGCTGTTGTCTCAGCCACAAGACGTTATCAGAAAGAATGGCACCAAGATTCCATACATGAAGAAA ACGAACATGTCTATCGAGGCTCGCGCTATCTGGAAGCAGCTTTCGAATAAGTACATGCTGCTACTCATCCCAGTG TTCCTCGCTGGACAGTTTGGTGCAACTTACCAGGGAAACTATTTGACGAGTATGACATCTCCAGTCCTCCTTTCT TGATGATAAATGGCATCGCTGACAGAAAACCTAGCTTACTTCACCGTCCGCTCCAGAGCCCTTGCATCTTTCCTC ACAGCCGTGGTCGGCGCCAGCGCCAACATAGTGACGGGCTTATTCCTCGATACAAAGTTTCTGTCACGAAGAACC AGATCCCAAGTTGTATACATATTCGTTGCTGTGTTTGTCACAGCGTCTTGGACATGGAACGCCATCGTCGAGTCG AAACTCTCCCGCATGACCGATCCCCCTGCCTTCGACTTGGGTGATGGCCCCTTCTTCAACTCGGCCTTCACCGTC TATATCTTTTTCCGGTTCTTCTATGAGATGTTGCAGACATACATTTATTGGTTGATGGCCGAGATCAAGGGAGCG CAGAGAGATGGCGATATCGCCCGAACAACCGGCATCCTGAGATCATGGGAGTCCATCGGCAGCACGATTGCCTAC GCGGTCGGCACAACCCACTGGGCCAACATCAACCAGATGGCGCTGGGATTTGCACTATGGGGTGCTACAGTCCCC TTCACGCTTATGGCGGTGTTTGGCAATTGGAATGTCGACGAGCTCGAGGCGGAGGAAGAGGAACAAACAGACAAC AGTAGTCTGGAGGCTCAGAGAGTGGTAATCGATTCCGAGGGGAAGAACTAA |