Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3067.t1
Gene name
Locationscaffold_04:622160..623436
Strand-
Gene length (bp)1276
Transcript length (bp)1080
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 1.4E-97 9 355

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3067.t1
MAAARTLRIGLIPGDGIGREVIPAGRRILESLPASLNLKFSFVDLDAGYETFQKTGTALPDKTVDTLKKECDGAL
FGAVSSPSTKVAGYSSPIVALRKKLDLYANVRPVKTTAGNSNGKPIDLVIVRENTEDLYVKEERTIDTPNGKVAE
AIKRISEHASFRIANIAGEIALRRQSIRAAAATSTRAQPMVTITHKSNVLSQTDGLFRETARRALAAEKFSSIFV
EEQIVDSMVYKLFRQPEFYDVIVAPNLYGDILSDGAAALVGSLGLVPSANVGDGFAIGEPCHGSAPDIEGKGISN
PIATIRSVALMLEFLGEEKAAAQIYAAVDGNLDAAQFLTPDMGGKATTQQVLEDVLKRL*
Coding >Pro_DTO377G3_2|g3067.t1
ATGGCTGCTGCCCGGACACTTCGCATTGGTCTCATCCCCGGAGACGGTATCGGACGCGAGGTCATCCCGGCCGGC
CGTCGGATCCTTGAGTCTCTCCCCGCGTCCCTGAACCTCAAGTTCAGCTTCGTCGACCTCGATGCTGGATACGAA
ACCTTCCAGAAGACTGGAACCGCTCTGCCCGACAAGACTGTCGATACCTTGAAGAAGGAGTGTGACGGTGCTCTC
TTTGGTGCTGTCAGCTCCCCTAGCACCAAGGTCGCCGGCTACTCGTCGCCCATTGTGGCTCTCCGCAAGAAGCTC
GACCTGTATGCCAACGTCCGCCCTGTCAAGACTACTGCCGGCAACAGCAACGGCAAGCCCATTGACTTGGTCATC
GTCCGCGAGAATACCGAGGACTTGTACGTGAAGGAAGAGCGCACCATCGATACCCCTAACGGCAAGGTTGCCGAG
GCTATCAAGCGTATTTCCGAGCATGCCTCGTTCCGCATCGCCAACATCGCCGGTGAGATTGCACTCCGCCGCCAG
AGCATCCGCGCGGCTGCCGCCACCTCTACCCGTGCCCAGCCCATGGTCACTATCACCCACAAGTCGAACGTGCTC
TCGCAGACTGACGGTCTCTTCCGTGAGACCGCGCGCCGTGCTCTCGCCGCCGAGAAGTTCTCCTCCATCTTCGTT
GAGGAGCAGATTGTCGACTCCATGGTCTACAAGCTCTTCCGCCAGCCCGAGTTCTACGATGTCATTGTCGCCCCT
AACCTCTACGGTGACATCCTCTCCGACGGTGCTGCTGCCCTTGTTGGCAGCTTGGGTCTCGTCCCCAGTGCCAAC
GTTGGTGATGGCTTCGCCATCGGCGAGCCCTGCCACGGCAGTGCCCCTGACATTGAGGGCAAGGGTATCTCCAAC
CCCATTGCTACTATCCGCAGTGTTGCTCTGATGCTCGAGTTCTTGGGCGAGGAGAAGGCTGCTGCCCAGATCTAC
GCTGCTGTCGATGGTAACCTGGATGCTGCTCAGTTCCTGACCCCCGATATGGGTGGAAAGGCTACCACTCAGCAG
GTTTTGGAGGATGTCCTGAAGAGACTGTAA
Transcript >Pro_DTO377G3_2|g3067.t1
ATGGCTGCTGCCCGGACACTTCGCATTGGTCTCATCCCCGGAGACGGTATCGGACGCGAGGTCATCCCGGCCGGC
CGTCGGATCCTTGAGTCTCTCCCCGCGTCCCTGAACCTCAAGTTCAGCTTCGTCGACCTCGATGCTGGATACGAA
ACCTTCCAGAAGACTGGAACCGCTCTGCCCGACAAGACTGTCGATACCTTGAAGAAGGAGTGTGACGGTGCTCTC
TTTGGTGCTGTCAGCTCCCCTAGCACCAAGGTCGCCGGCTACTCGTCGCCCATTGTGGCTCTCCGCAAGAAGCTC
GACCTGTATGCCAACGTCCGCCCTGTCAAGACTACTGCCGGCAACAGCAACGGCAAGCCCATTGACTTGGTCATC
GTCCGCGAGAATACCGAGGACTTGTACGTGAAGGAAGAGCGCACCATCGATACCCCTAACGGCAAGGTTGCCGAG
GCTATCAAGCGTATTTCCGAGCATGCCTCGTTCCGCATCGCCAACATCGCCGGTGAGATTGCACTCCGCCGCCAG
AGCATCCGCGCGGCTGCCGCCACCTCTACCCGTGCCCAGCCCATGGTCACTATCACCCACAAGTCGAACGTGCTC
TCGCAGACTGACGGTCTCTTCCGTGAGACCGCGCGCCGTGCTCTCGCCGCCGAGAAGTTCTCCTCCATCTTCGTT
GAGGAGCAGATTGTCGACTCCATGGTCTACAAGCTCTTCCGCCAGCCCGAGTTCTACGATGTCATTGTCGCCCCT
AACCTCTACGGTGACATCCTCTCCGACGGTGCTGCTGCCCTTGTTGGCAGCTTGGGTCTCGTCCCCAGTGCCAAC
GTTGGTGATGGCTTCGCCATCGGCGAGCCCTGCCACGGCAGTGCCCCTGACATTGAGGGCAAGGGTATCTCCAAC
CCCATTGCTACTATCCGCAGTGTTGCTCTGATGCTCGAGTTCTTGGGCGAGGAGAAGGCTGCTGCCCAGATCTAC
GCTGCTGTCGATGGTAACCTGGATGCTGCTCAGTTCCTGACCCCCGATATGGGTGGAAAGGCTACCACTCAGCAG
GTTTTGGAGGATGTCCTGAAGAGACTGTAA
Gene >Pro_DTO377G3_2|g3067.t1
ATGGCTGCTGCCCGGACACTTCGCATTGGTACGATCGCCCTTGTTTTGCGATCTCGTGGCTCGGCAATTGACTGA
CATGATCGGAATATTATAGGTCTCATCCCCGGAGACGGTATCGGACGCGAGGTCATCCCGGTGGGTAACACTCAA
GATCTGATATGCGAGGCGATTCACTGACTGGAGTTGCTTGATGGAATATAGGCCGGCCGTCGGATCCTTGAGTCT
CTCCCCGCGTCCCTGAACCTCAAGTTCAGCTTCGTCGACCTCGATGCTGGATACGAAACCTTCCAGAAGACTGGA
ACCGCTCTGCCCGACAAGACTGTCGATACCTTGAAGAAGGAGTGTGACGGTGCTCTCTTTGGTGCTGTCAGGTAA
GCTACGATATCATTCTTTCAGCATGCGCAATTCCGGCTGACAATTGCTACCAACCCAAAGCTCCCCTAGCACCAA
GGTCGCCGGCTACTCGTCGCCCATTGTGGCTCTCCGCAAGAAGCTCGACCTGTATGCCAACGTCCGCCCTGTCAA
GACTACTGCCGGCAACAGCAACGGCAAGCCCATTGACTTGGTCATCGTCCGCGAGAATACCGAGGACTTGTACGT
GAAGGAAGAGCGCACCATCGATACCCCTAACGGCAAGGTTGCCGAGGCTATCAAGCGTATTTCCGAGCATGCCTC
GTTCCGCATCGCCAACATCGCCGGTGAGATTGCACTCCGCCGCCAGAGCATCCGCGCGGCTGCCGCCACCTCTAC
CCGTGCCCAGCCCATGGTCACTATCACCCACAAGTCGAACGTGCTCTCGCAGACTGACGGTCTCTTCCGTGAGAC
CGCGCGCCGTGCTCTCGCCGCCGAGAAGTTCTCCTCCATCTTCGTTGAGGAGCAGATTGTCGACTCCATGGTCTA
CAAGCTCTTCCGCCAGCCCGAGTTCTACGATGTCATTGTCGCCCCTAACCTCTACGGTGACATCCTCTCCGACGG
TGCTGCTGCCCTTGTTGGCAGCTTGGGTCTCGTCCCCAGTGCCAACGTTGGTGATGGCTTCGCCATCGGCGAGCC
CTGCCACGGCAGTGCCCCTGACATTGAGGGCAAGGGTATCTCCAACCCCATTGCTACTATCCGCAGTGTTGCTCT
GATGCTCGAGTTCTTGGGCGAGGAGAAGGCTGCTGCCCAGATCTACGCTGCTGTCGATGGTAACCTGGATGCTGC
TCAGTTCCTGACCCCCGATATGGGTGGAAAGGCTACCACTCAGCAGGTTTTGGAGGATGTCCTGAAGAGACTGTA
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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