Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g3036.t1
Gene name
Locationscaffold_04:534773..535819
Strand+
Gene length (bp)1046
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01184 Gpr1_Fun34_YaaH GPR1/FUN34/yaaH family 3.0E-89 70 287

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0044425 membrane part No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 88 110 22
2 120 139 19
3 151 173 22
4 188 210 22
5 215 234 19
6 249 271 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g3036.t1
MSATQTMDHAALEKDAGPSPPSPQISSGQNGAPMQPQMSVEEHQVAQAAARFGYGPLAQVNNNERSLPPFGGEFQ
PGLYKPVEGRKFANPAPLGLCAFALTTFVLSAINMGTLDISSPNIVVGLAFAYGGLVQLLSGMWEMAVGNTFGAT
ALSSYGGFWIAFAIVLTPGGFEIGEALGESSSDPSKFYDSMGLFLLGWFIFTTIMLFCTLKSTVAFFMLFFTLDL
TFLLLGIAYLQRSPDGSPNTNVQMAGGFFGFLAAFSAWYNALAGLADNSNSFFIIPVAHFPWSPTGRVRRGKTDR
ELA*
Coding >Pro_DTO377G3_2|g3036.t1
ATGTCTGCCACTCAAACAATGGACCATGCCGCATTGGAGAAGGATGCGGGTCCCTCTCCTCCCTCTCCCCAGATC
AGCTCTGGCCAGAACGGCGCCCCCATGCAGCCTCAGATGTCCGTCGAAGAGCACCAGGTAGCACAAGCGGCCGCG
CGCTTCGGCTACGGACCCCTGGCCCAAGTCAACAACAACGAACGATCCCTGCCTCCCTTCGGTGGTGAGTTCCAG
CCCGGTCTGTACAAGCCCGTCGAAGGCCGCAAATTCGCCAATCCGGCTCCTCTCGGCCTGTGCGCTTTCGCCCTT
ACTACTTTCGTCCTGAGCGCCATCAACATGGGCACCCTGGATATCTCCAGCCCCAACATTGTGGTCGGTCTTGCT
TTTGCTTACGGTGGTCTTGTTCAGCTGCTCTCTGGCATGTGGGAAATGGCTGTCGGAAACACCTTTGGTGCCACC
GCTCTGTCCTCCTACGGTGGTTTCTGGATCGCGTTCGCTATCGTCTTGACCCCTGGTGGGTTCGAGATTGGTGAG
GCTCTCGGCGAGTCAAGCAGTGACCCTTCCAAGTTCTATGACTCCATGGGTCTCTTCCTGCTGGGCTGGTTCATC
TTCACCACCATCATGTTGTTCTGCACCCTCAAGTCCACCGTCGCCTTCTTCATGCTGTTCTTCACCCTGGACCTG
ACCTTCCTCCTGCTCGGCATCGCCTACCTGCAGCGCAGTCCCGACGGCAGCCCCAACACCAACGTCCAGATGGCC
GGTGGATTCTTCGGCTTCCTGGCTGCTTTCTCGGCCTGGTACAACGCCCTGGCTGGTCTTGCTGATAACAGCAAC
AGCTTCTTCATCATTCCCGTCGCTCACTTCCCCTGGTCTCCCACTGGCCGTGTTCGCCGTGGAAAGACCGACCGT
GAGCTCGCATAA
Transcript >Pro_DTO377G3_2|g3036.t1
ATGTCTGCCACTCAAACAATGGACCATGCCGCATTGGAGAAGGATGCGGGTCCCTCTCCTCCCTCTCCCCAGATC
AGCTCTGGCCAGAACGGCGCCCCCATGCAGCCTCAGATGTCCGTCGAAGAGCACCAGGTAGCACAAGCGGCCGCG
CGCTTCGGCTACGGACCCCTGGCCCAAGTCAACAACAACGAACGATCCCTGCCTCCCTTCGGTGGTGAGTTCCAG
CCCGGTCTGTACAAGCCCGTCGAAGGCCGCAAATTCGCCAATCCGGCTCCTCTCGGCCTGTGCGCTTTCGCCCTT
ACTACTTTCGTCCTGAGCGCCATCAACATGGGCACCCTGGATATCTCCAGCCCCAACATTGTGGTCGGTCTTGCT
TTTGCTTACGGTGGTCTTGTTCAGCTGCTCTCTGGCATGTGGGAAATGGCTGTCGGAAACACCTTTGGTGCCACC
GCTCTGTCCTCCTACGGTGGTTTCTGGATCGCGTTCGCTATCGTCTTGACCCCTGGTGGGTTCGAGATTGGTGAG
GCTCTCGGCGAGTCAAGCAGTGACCCTTCCAAGTTCTATGACTCCATGGGTCTCTTCCTGCTGGGCTGGTTCATC
TTCACCACCATCATGTTGTTCTGCACCCTCAAGTCCACCGTCGCCTTCTTCATGCTGTTCTTCACCCTGGACCTG
ACCTTCCTCCTGCTCGGCATCGCCTACCTGCAGCGCAGTCCCGACGGCAGCCCCAACACCAACGTCCAGATGGCC
GGTGGATTCTTCGGCTTCCTGGCTGCTTTCTCGGCCTGGTACAACGCCCTGGCTGGTCTTGCTGATAACAGCAAC
AGCTTCTTCATCATTCCCGTCGCTCACTTCCCCTGGTCTCCCACTGGCCGTGTTCGCCGTGGAAAGACCGACCGT
GAGCTCGCATAA
Gene >Pro_DTO377G3_2|g3036.t1
ATGTCTGCCACTCAAACAATGGACCATGCCGCATTGGAGAAGGATGCGGGTCCCTCTCCTCCCTCTCCCCAGATC
AGCTCTGGCCAGAACGGCGCCCCCATGCAGCCTCAGATGTCCGTCGAAGAGCACCAGGTAGCACAAGCGGCCGCG
CGCTTCGGCTACGGACCCCTGGCCCAAGTCAACAACAACGAACGATCCCTGCCTCCCTTCGGTGGTGAGTTCCAG
CCCGGTCTGTACAAGCCCGTCGAAGGCCGCAAATTCGCCAATCCGGCTCCTCTCGGCCTGTGCGCTTTCGCCCTT
ACTACTTTCGTCCTGAGCGCCATCAACATGGGCACCCTGGATATCTCCAGCCCCAACATTGTGGTCGGTCTTGCT
TTTGCTTACGGTGGTCTTGTTCAGCTGCTCTCTGGCATGTGGTATGTAGCTTCCGTGGCCTCGGCCTGAGGTTCC
CCTGACATGAGATCTGCGACTAATACGCGCTTCTTTACTAGGGAAATGGCTGTCGGAAACACCTTTGGTGCCACC
GCTCTGTCCTCCTACGGTGGTTTCTGGATCGCGTTCGCTATCGTCTTGACCCCTGGTGGGTTCGAGATTGGTGAG
GCTCTCGGCGAGTCAAGCAGTGACCCTTCCAAGTTCTATGACTCCATGGGTCTCTTCCTGCTGGTAAGTGTTCCT
TCTTCACAAGACATGTGCAAGAAATCATCCCGCTGACAATGTAACAGGGCTGGTTCATCTTCACCACCATCATGT
TGTTCTGCACCCTCAAGTCCACCGTCGCCTTCTTCATGCTGTTCTTCACCCTGGACCTGACCTTCCTCCTGCTCG
GCATCGCCTACCTGCAGCGCAGTCCCGACGGCAGCCCCAACACCAACGTCCAGATGGCCGGTGGATTCTTCGGCT
TCCTGGCTGCTTTCTCGGCCTGGTACAACGCCCTGGCTGGTCTTGCTGATAACAGCAACAGCTTCTTCATCATTC
CCGTCGCTCACTTCCCCTGGTCTCCCACTGGCCGTGTTCGCCGTGGAAAGACCGACCGTGAGCTCGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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