Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2972.t1
Gene name
Locationscaffold_04:360507..362305
Strand+
Gene length (bp)1798
Transcript length (bp)1605
Coding sequence length (bp)1605
Protein length (aa) 535

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 2.0E-49 55 503
PF00324 AA_permease Amino acid permease 7.8E-26 62 514

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.45

Transmembrane Domains

Domain # Start End Length
1 60 82 22
2 92 114 22
3 135 157 22
4 161 179 18
5 186 208 22
6 213 234 21
7 294 316 22
8 347 369 22
9 394 413 19
10 423 445 22
11 458 480 22
12 495 514 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2972.t1
MADDATANQRRSSKSKGSEAYAPAEYPNIEEGKQSSANGVLEALGYEPELIRNRSTLQVAFMSFVLAAIPYGLAT
TFTYPLVGGGPVNIIWGWLAVSLITLCVAASLGEITSVYPTAGGVYYQTFMISPPSYRRIASWICGWSYVVGNIT
ITLAVNLGSTLFLISCINVFESSPGVGIFEAETYQVFLIFIAVTFLANAISTYGNAWLPYLDTFAIFVTFIGVLA
IVICVLVVAKEGRHDAKYVFTSFEPISGWPAGWSFCVGLLQAAYSTSSTGMVICMCEEVQQPSTQVPKAMVGTVI
LNTLAGFLFLIPLVFVLPDTKVLAALESGQPVPSIIKSAVGSSVGSFLLLLPLILLSMFCVIGCTTTVSRSTWAF
ARDGGIPGSRWWKQVNRDGVPFNAMMLGMVIQILLGFIYFGSTTAFNAFTGVGVITLTVSYACPIVVSLAGGRRH
IKNGQFDLGTLGLVCNIVTLAWSLLAIPLFCMPSSIPVAADTVNYAPVVFVAFILIASGWYWVWGYEKYVGPPTM
DDEFRSSDL*
Coding >Pro_DTO377G3_2|g2972.t1
ATGGCAGACGATGCTACTGCCAACCAGCGTCGTTCTTCAAAGAGCAAAGGCTCCGAGGCCTATGCACCTGCGGAA
TACCCTAACATCGAAGAAGGCAAACAATCGTCAGCAAATGGGGTACTAGAAGCCCTGGGCTATGAGCCTGAACTC
ATTCGAAACCGCTCCACGCTTCAGGTGGCCTTCATGTCCTTTGTGCTCGCAGCAATTCCATACGGACTGGCTACG
ACTTTCACCTACCCTCTTGTTGGGGGAGGCCCTGTCAACATAATCTGGGGATGGCTTGCCGTTTCTTTGATTACG
CTATGTGTGGCTGCTTCACTTGGCGAAATCACCTCAGTCTATCCAACTGCCGGAGGGGTCTACTACCAGACTTTT
ATGATATCTCCACCGTCATATCGAAGAATCGCCTCGTGGATTTGCGGATGGTCATATGTTGTTGGAAATATCACC
ATCACGCTTGCAGTCAACCTTGGGAGTACTCTATTCCTCATTTCATGTATCAACGTTTTCGAATCCTCTCCAGGA
GTAGGAATCTTCGAAGCGGAAACGTACCAAGTTTTTCTTATATTTATCGCAGTCACATTTCTCGCTAACGCAATA
TCGACATATGGAAATGCATGGCTGCCTTACCTTGACACATTCGCAATATTCGTGACATTTATAGGAGTGTTGGCT
ATTGTGATATGTGTTCTTGTGGTTGCGAAAGAGGGTAGACATGACGCCAAATATGTTTTTACTAGTTTTGAGCCG
ATATCTGGCTGGCCAGCAGGCTGGTCTTTCTGCGTCGGACTTTTACAGGCAGCTTATAGCACTTCTTCCACTGGT
ATGGTGATTTGTATGTGTGAAGAAGTTCAGCAACCATCAACACAAGTCCCAAAAGCAATGGTTGGAACGGTCATT
CTAAATACCCTCGCCGGGTTCCTCTTCCTTATTCCATTGGTTTTCGTGCTCCCCGACACAAAGGTTTTAGCAGCT
CTCGAATCCGGTCAACCAGTTCCGAGTATTATCAAGTCCGCTGTTGGAAGTTCAGTTGGATCATTCCTGCTTCTC
CTACCATTGATATTGCTCTCGATGTTCTGTGTCATTGGCTGTACTACGACCGTCTCCCGAAGCACCTGGGCGTTT
GCTCGCGATGGAGGTATACCAGGCTCCAGATGGTGGAAGCAGGTAAACAGAGACGGCGTACCTTTCAATGCTATG
ATGCTTGGCATGGTTATTCAGATATTGCTTGGCTTTATCTACTTCGGGTCAACTACTGCATTTAATGCATTCACA
GGCGTCGGAGTTATTACCTTGACTGTCAGCTATGCTTGCCCAATCGTTGTGTCTCTTGCTGGAGGTCGAAGACAC
ATAAAGAATGGCCAATTCGATCTTGGCACACTCGGGCTGGTTTGCAATATTGTGACATTGGCATGGAGTCTTCTT
GCCATTCCGCTATTTTGCATGCCTTCTTCAATCCCCGTCGCTGCCGATACGGTCAACTATGCACCGGTGGTGTTT
GTTGCATTTATACTAATTGCTTCTGGATGGTACTGGGTTTGGGGCTACGAGAAGTATGTTGGGCCGCCAACAATG
GACGATGAGTTTCGCTCATCAGACTTGTAA
Transcript >Pro_DTO377G3_2|g2972.t1
ATGGCAGACGATGCTACTGCCAACCAGCGTCGTTCTTCAAAGAGCAAAGGCTCCGAGGCCTATGCACCTGCGGAA
TACCCTAACATCGAAGAAGGCAAACAATCGTCAGCAAATGGGGTACTAGAAGCCCTGGGCTATGAGCCTGAACTC
ATTCGAAACCGCTCCACGCTTCAGGTGGCCTTCATGTCCTTTGTGCTCGCAGCAATTCCATACGGACTGGCTACG
ACTTTCACCTACCCTCTTGTTGGGGGAGGCCCTGTCAACATAATCTGGGGATGGCTTGCCGTTTCTTTGATTACG
CTATGTGTGGCTGCTTCACTTGGCGAAATCACCTCAGTCTATCCAACTGCCGGAGGGGTCTACTACCAGACTTTT
ATGATATCTCCACCGTCATATCGAAGAATCGCCTCGTGGATTTGCGGATGGTCATATGTTGTTGGAAATATCACC
ATCACGCTTGCAGTCAACCTTGGGAGTACTCTATTCCTCATTTCATGTATCAACGTTTTCGAATCCTCTCCAGGA
GTAGGAATCTTCGAAGCGGAAACGTACCAAGTTTTTCTTATATTTATCGCAGTCACATTTCTCGCTAACGCAATA
TCGACATATGGAAATGCATGGCTGCCTTACCTTGACACATTCGCAATATTCGTGACATTTATAGGAGTGTTGGCT
ATTGTGATATGTGTTCTTGTGGTTGCGAAAGAGGGTAGACATGACGCCAAATATGTTTTTACTAGTTTTGAGCCG
ATATCTGGCTGGCCAGCAGGCTGGTCTTTCTGCGTCGGACTTTTACAGGCAGCTTATAGCACTTCTTCCACTGGT
ATGGTGATTTGTATGTGTGAAGAAGTTCAGCAACCATCAACACAAGTCCCAAAAGCAATGGTTGGAACGGTCATT
CTAAATACCCTCGCCGGGTTCCTCTTCCTTATTCCATTGGTTTTCGTGCTCCCCGACACAAAGGTTTTAGCAGCT
CTCGAATCCGGTCAACCAGTTCCGAGTATTATCAAGTCCGCTGTTGGAAGTTCAGTTGGATCATTCCTGCTTCTC
CTACCATTGATATTGCTCTCGATGTTCTGTGTCATTGGCTGTACTACGACCGTCTCCCGAAGCACCTGGGCGTTT
GCTCGCGATGGAGGTATACCAGGCTCCAGATGGTGGAAGCAGGTAAACAGAGACGGCGTACCTTTCAATGCTATG
ATGCTTGGCATGGTTATTCAGATATTGCTTGGCTTTATCTACTTCGGGTCAACTACTGCATTTAATGCATTCACA
GGCGTCGGAGTTATTACCTTGACTGTCAGCTATGCTTGCCCAATCGTTGTGTCTCTTGCTGGAGGTCGAAGACAC
ATAAAGAATGGCCAATTCGATCTTGGCACACTCGGGCTGGTTTGCAATATTGTGACATTGGCATGGAGTCTTCTT
GCCATTCCGCTATTTTGCATGCCTTCTTCAATCCCCGTCGCTGCCGATACGGTCAACTATGCACCGGTGGTGTTT
GTTGCATTTATACTAATTGCTTCTGGATGGTACTGGGTTTGGGGCTACGAGAAGTATGTTGGGCCGCCAACAATG
GACGATGAGTTTCGCTCATCAGACTTGTAA
Gene >Pro_DTO377G3_2|g2972.t1
ATGGCAGACGATGCTACTGCCAACCAGCGTCGTTCTTCAAAGAGCAAAGGCTCCGAGGCCTATGCACCTGCGGAA
TACCCTAACATCGAAGAAGGCAAACAATCGTCAGCAAATGGGGTACTAGAAGCCCTGGGCTATGAGCCTGAACTC
ATTCGAAACCGCTCCACGCTTCAGGTGGCCTTCATGTCCTTTGTGCTCGCAGCAATTCCATACGGACTGGCTACG
ACTTTCACCTACCCTCTTGTTGGGGGAGGCCCTGTCAACATAATCTGGGGATGGCTTGCCGTTTCTTTGATTACG
CTATGTGTGGCTGCTTCACTTGGCGAAATCACCTCAGTCTATCCAACTGCCGGAGGGGTCTACTACCAGACTTTT
ATGATATCTCCACCGTCATATCGAAGAATCGCCTCGTGGATTTGCGGATGGTCATATGTTGTTGGAAATATCACC
ATCACGCTTGCAGTCAACCTTGGGAGTACTCTATTCCTCATTTCATGTATCAACGTTTTCGAATCCTCTCCAGGA
GTAGGAATCTTCGAAGCGGAAACGTACCAAGTTTTTCTTATATTTATCGCAGTCACATTTCTCGCTAACGCAATA
TCGACATATGGAAATGCATGGCTGCCTTACCTTGACGTATGTCTAAACCATAACCCTTCCAACATCGCTTGCTAA
TACAGAAGCTAGACATTCGCAATATTCGTGACATTTATAGGAGTGTTGGCTATTGTGATATGTGTTCTTGTGGTT
GCGAAAGAGGGTAGACATGACGCCAAATATGTTTTTACTAGTTTTGAGCCGATATCTGGCTGGCCAGCAGGCTGG
TCTTTCTGCGTCGGACTTTTACAGGCAGCTTATAGCACTTCTTCCACTGGTATGGTGATTTGGTATGTAACATGT
TTTGTTTTCCCACCCCAGATGACTATCTCCCATCTCATTTCTACTATGAAACCCCTATATCTGACGCGTCAAAAG
TATGTGTGAAGAAGTTCAGCAACCATCAACACAAGTCCCAAAAGCAATGGTTGGAACGGTCATTCTAAATACCCT
CGCCGGGTTCCTCTTCCTTATTCCATTGGTTTTCGTGCTCCCCGACACAAAGGTTTTAGCAGCTCTCGAATCCGG
TCAACCAGTTCCGAGTATTATCAAGTCCGCTGTTGGAAGTTCAGTTGGATCATTCCTGCTTCTCCTACCATTGAT
ATTGCTCTCGATGTTCTGTGTCATTGGCTGTACTACGACCGTCTCCCGAAGCACCTGGGCGTTTGCTCGCGATGG
AGGTATACCAGGCTCCAGATGGTGGAAGCAGGTAAACAGAGACGGCGTACCTTTCAATGCTATGATGCTTGGCAT
GGTTATTCAGATATTGCTTGGCTTTATCTACTTCGGGTCAACTACTGCATTTAATGCATTCACAGGCGTCGGAGT
TATTACCTTGACTGTCAGCTATGCTTGCCCAATCGTTGTGTCTCTTGCTGGAGGTCGAAGACACATAAAGAATGG
CCAATTCGATCTTGGCACACTCGGGCTGGTTTGCAATATTGTGACATTGGGTAAGCATGCACGATGTGGGCACGA
TTTATCGCTATCGCTAATGCATATTCTAGCATGGAGTCTTCTTGCCATTCCGCTATTTTGCATGCCTTCTTCAAT
CCCCGTCGCTGCCGATACGGTCAACTATGCACCGGTGGTGTTTGTTGCATTTATACTAATTGCTTCTGGATGGTA
CTGGGTTTGGGGCTACGAGAAGTATGTTGGGCCGCCAACAATGGACGATGAGTTTCGCTCATCAGACTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail