Protein ID | Pro_DTO377G3_2|g2954.t1 |
Gene name | |
Location | scaffold_04:307251..308169 |
Strand | + |
Gene length (bp) | 918 |
Transcript length (bp) | 813 |
Coding sequence length (bp) | 813 |
Protein length (aa) | 271 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03328 | HpcH_HpaI | HpcH/HpaI aldolase/citrate lyase family | 9.5E-35 | 19 | 245 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003824 | catalytic activity | Yes |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 35 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2954.t1 MQGLNHVKTVLDNGGLALGVWQLLPGSNMSRTLARAGYDWVLVDCEHGNIDDAAMHEAVPAIVSYGVSPIVRVPD FQSWMIKRALDAGAHGVLAPLVRTVEDTKAFVEACRFPPQGKRGFGSPFPMDRFGRNVSATQYLTEANANLLLSV QIETREAFDNVDSIAAVEGLDLLFVGPFDLANGIGHPVLGSTFAPELEQAIEKVLSSAHKAGKKAGIYCGNGKQA KKYADLGYDFVNVVTDVGALTSSLASEMEIVTQKAGRTASGPYGS* |
Coding | >Pro_DTO377G3_2|g2954.t1 ATGCAAGGTCTAAACCATGTAAAGACAGTGCTCGACAATGGCGGCCTCGCTCTGGGAGTGTGGCAGCTATTGCCC GGCAGCAACATGTCGCGCACTCTAGCACGAGCTGGATACGATTGGGTTTTGGTGGACTGTGAACATGGAAATATC GATGACGCCGCAATGCACGAAGCTGTCCCCGCCATAGTATCATATGGAGTGAGCCCGATTGTTCGCGTTCCGGAT TTCCAATCTTGGATGATTAAACGGGCTTTGGATGCAGGCGCACACGGAGTCCTCGCTCCTCTTGTACGAACAGTG GAAGACACAAAGGCCTTCGTCGAGGCCTGCCGATTCCCACCACAGGGGAAACGAGGCTTCGGGTCGCCTTTCCCG ATGGACAGGTTTGGTAGGAATGTATCAGCCACCCAGTACCTGACTGAGGCCAATGCCAATCTTCTGCTCTCAGTC CAGATTGAGACGAGAGAGGCTTTTGACAATGTCGATTCCATCGCCGCCGTTGAAGGGCTTGATCTATTGTTTGTC GGACCTTTTGACCTGGCAAATGGTATCGGCCACCCCGTACTAGGTAGTACATTTGCGCCTGAGTTGGAACAAGCC ATTGAGAAGGTTCTGTCTTCGGCGCACAAGGCAGGCAAGAAGGCTGGAATCTACTGTGGAAATGGAAAGCAGGCA AAGAAATATGCCGACTTGGGGTATGACTTTGTCAATGTTGTAACTGACGTTGGTGCTCTGACTAGCTCGCTCGCA AGTGAGATGGAGATTGTCACTCAAAAAGCAGGCAGGACTGCCTCTGGGCCTTACGGTAGCTAG |
Transcript | >Pro_DTO377G3_2|g2954.t1 ATGCAAGGTCTAAACCATGTAAAGACAGTGCTCGACAATGGCGGCCTCGCTCTGGGAGTGTGGCAGCTATTGCCC GGCAGCAACATGTCGCGCACTCTAGCACGAGCTGGATACGATTGGGTTTTGGTGGACTGTGAACATGGAAATATC GATGACGCCGCAATGCACGAAGCTGTCCCCGCCATAGTATCATATGGAGTGAGCCCGATTGTTCGCGTTCCGGAT TTCCAATCTTGGATGATTAAACGGGCTTTGGATGCAGGCGCACACGGAGTCCTCGCTCCTCTTGTACGAACAGTG GAAGACACAAAGGCCTTCGTCGAGGCCTGCCGATTCCCACCACAGGGGAAACGAGGCTTCGGGTCGCCTTTCCCG ATGGACAGGTTTGGTAGGAATGTATCAGCCACCCAGTACCTGACTGAGGCCAATGCCAATCTTCTGCTCTCAGTC CAGATTGAGACGAGAGAGGCTTTTGACAATGTCGATTCCATCGCCGCCGTTGAAGGGCTTGATCTATTGTTTGTC GGACCTTTTGACCTGGCAAATGGTATCGGCCACCCCGTACTAGGTAGTACATTTGCGCCTGAGTTGGAACAAGCC ATTGAGAAGGTTCTGTCTTCGGCGCACAAGGCAGGCAAGAAGGCTGGAATCTACTGTGGAAATGGAAAGCAGGCA AAGAAATATGCCGACTTGGGGTATGACTTTGTCAATGTTGTAACTGACGTTGGTGCTCTGACTAGCTCGCTCGCA AGTGAGATGGAGATTGTCACTCAAAAAGCAGGCAGGACTGCCTCTGGGCCTTACGGTAGCTAG |
Gene | >Pro_DTO377G3_2|g2954.t1 ATGCAAGGTCTAAACCATGTAAAGACAGTGCTCGACAATGGCGGCCTCGCTCTGGGAGTGTGGCAGCTATTGCCC GGCAGCAACATGTCGCGCACTCTAGCACGAGCTGGATACGATTGGGTTTTGGTGGACTGTGAACATGGAAATATC GATGGCTAGTGTTTTTGTCATTATTCGAAAGCTCATGCTAACATTCCCACAGACGCCGCAATGCACGAAGCTGTC CCCGCCATAGTATCATATGGAGTGAGCCCGATTGTTCGCGTTCCGGATTTCCAATCTTGGATGATTAAACGTATG TTAAACAGAGTATATCGCTAGCCCACTTGACAATCTCTTATCCTTTGTATAGGGGCTTTGGATGCAGGCGCACAC GGAGTCCTCGCTCCTCTTGTACGAACAGTGGAAGACACAAAGGCCTTCGTCGAGGCCTGCCGATTCCCACCACAG GGGAAACGAGGCTTCGGGTCGCCTTTCCCGATGGACAGGTTTGGTAGGAATGTATCAGCCACCCAGTACCTGACT GAGGCCAATGCCAATCTTCTGCTCTCAGTCCAGATTGAGACGAGAGAGGCTTTTGACAATGTCGATTCCATCGCC GCCGTTGAAGGGCTTGATCTATTGTTTGTCGGACCTTTTGACCTGGCAAATGGTATCGGCCACCCCGTACTAGGT AGTACATTTGCGCCTGAGTTGGAACAAGCCATTGAGAAGGTTCTGTCTTCGGCGCACAAGGCAGGCAAGAAGGCT GGAATCTACTGTGGAAATGGAAAGCAGGCAAAGAAATATGCCGACTTGGGGTATGACTTTGTCAATGTTGTAACT GACGTTGGTGCTCTGACTAGCTCGCTCGCAAGTGAGATGGAGATTGTCACTCAAAAAGCAGGCAGGACTGCCTCT GGGCCTTACGGTAGCTAG |