Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2954.t1
Gene name
Locationscaffold_04:307251..308169
Strand+
Gene length (bp)918
Transcript length (bp)813
Coding sequence length (bp)813
Protein length (aa) 271

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03328 HpcH_HpaI HpcH/HpaI aldolase/citrate lyase family 9.5E-35 19 245

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 35 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2954.t1
MQGLNHVKTVLDNGGLALGVWQLLPGSNMSRTLARAGYDWVLVDCEHGNIDDAAMHEAVPAIVSYGVSPIVRVPD
FQSWMIKRALDAGAHGVLAPLVRTVEDTKAFVEACRFPPQGKRGFGSPFPMDRFGRNVSATQYLTEANANLLLSV
QIETREAFDNVDSIAAVEGLDLLFVGPFDLANGIGHPVLGSTFAPELEQAIEKVLSSAHKAGKKAGIYCGNGKQA
KKYADLGYDFVNVVTDVGALTSSLASEMEIVTQKAGRTASGPYGS*
Coding >Pro_DTO377G3_2|g2954.t1
ATGCAAGGTCTAAACCATGTAAAGACAGTGCTCGACAATGGCGGCCTCGCTCTGGGAGTGTGGCAGCTATTGCCC
GGCAGCAACATGTCGCGCACTCTAGCACGAGCTGGATACGATTGGGTTTTGGTGGACTGTGAACATGGAAATATC
GATGACGCCGCAATGCACGAAGCTGTCCCCGCCATAGTATCATATGGAGTGAGCCCGATTGTTCGCGTTCCGGAT
TTCCAATCTTGGATGATTAAACGGGCTTTGGATGCAGGCGCACACGGAGTCCTCGCTCCTCTTGTACGAACAGTG
GAAGACACAAAGGCCTTCGTCGAGGCCTGCCGATTCCCACCACAGGGGAAACGAGGCTTCGGGTCGCCTTTCCCG
ATGGACAGGTTTGGTAGGAATGTATCAGCCACCCAGTACCTGACTGAGGCCAATGCCAATCTTCTGCTCTCAGTC
CAGATTGAGACGAGAGAGGCTTTTGACAATGTCGATTCCATCGCCGCCGTTGAAGGGCTTGATCTATTGTTTGTC
GGACCTTTTGACCTGGCAAATGGTATCGGCCACCCCGTACTAGGTAGTACATTTGCGCCTGAGTTGGAACAAGCC
ATTGAGAAGGTTCTGTCTTCGGCGCACAAGGCAGGCAAGAAGGCTGGAATCTACTGTGGAAATGGAAAGCAGGCA
AAGAAATATGCCGACTTGGGGTATGACTTTGTCAATGTTGTAACTGACGTTGGTGCTCTGACTAGCTCGCTCGCA
AGTGAGATGGAGATTGTCACTCAAAAAGCAGGCAGGACTGCCTCTGGGCCTTACGGTAGCTAG
Transcript >Pro_DTO377G3_2|g2954.t1
ATGCAAGGTCTAAACCATGTAAAGACAGTGCTCGACAATGGCGGCCTCGCTCTGGGAGTGTGGCAGCTATTGCCC
GGCAGCAACATGTCGCGCACTCTAGCACGAGCTGGATACGATTGGGTTTTGGTGGACTGTGAACATGGAAATATC
GATGACGCCGCAATGCACGAAGCTGTCCCCGCCATAGTATCATATGGAGTGAGCCCGATTGTTCGCGTTCCGGAT
TTCCAATCTTGGATGATTAAACGGGCTTTGGATGCAGGCGCACACGGAGTCCTCGCTCCTCTTGTACGAACAGTG
GAAGACACAAAGGCCTTCGTCGAGGCCTGCCGATTCCCACCACAGGGGAAACGAGGCTTCGGGTCGCCTTTCCCG
ATGGACAGGTTTGGTAGGAATGTATCAGCCACCCAGTACCTGACTGAGGCCAATGCCAATCTTCTGCTCTCAGTC
CAGATTGAGACGAGAGAGGCTTTTGACAATGTCGATTCCATCGCCGCCGTTGAAGGGCTTGATCTATTGTTTGTC
GGACCTTTTGACCTGGCAAATGGTATCGGCCACCCCGTACTAGGTAGTACATTTGCGCCTGAGTTGGAACAAGCC
ATTGAGAAGGTTCTGTCTTCGGCGCACAAGGCAGGCAAGAAGGCTGGAATCTACTGTGGAAATGGAAAGCAGGCA
AAGAAATATGCCGACTTGGGGTATGACTTTGTCAATGTTGTAACTGACGTTGGTGCTCTGACTAGCTCGCTCGCA
AGTGAGATGGAGATTGTCACTCAAAAAGCAGGCAGGACTGCCTCTGGGCCTTACGGTAGCTAG
Gene >Pro_DTO377G3_2|g2954.t1
ATGCAAGGTCTAAACCATGTAAAGACAGTGCTCGACAATGGCGGCCTCGCTCTGGGAGTGTGGCAGCTATTGCCC
GGCAGCAACATGTCGCGCACTCTAGCACGAGCTGGATACGATTGGGTTTTGGTGGACTGTGAACATGGAAATATC
GATGGCTAGTGTTTTTGTCATTATTCGAAAGCTCATGCTAACATTCCCACAGACGCCGCAATGCACGAAGCTGTC
CCCGCCATAGTATCATATGGAGTGAGCCCGATTGTTCGCGTTCCGGATTTCCAATCTTGGATGATTAAACGTATG
TTAAACAGAGTATATCGCTAGCCCACTTGACAATCTCTTATCCTTTGTATAGGGGCTTTGGATGCAGGCGCACAC
GGAGTCCTCGCTCCTCTTGTACGAACAGTGGAAGACACAAAGGCCTTCGTCGAGGCCTGCCGATTCCCACCACAG
GGGAAACGAGGCTTCGGGTCGCCTTTCCCGATGGACAGGTTTGGTAGGAATGTATCAGCCACCCAGTACCTGACT
GAGGCCAATGCCAATCTTCTGCTCTCAGTCCAGATTGAGACGAGAGAGGCTTTTGACAATGTCGATTCCATCGCC
GCCGTTGAAGGGCTTGATCTATTGTTTGTCGGACCTTTTGACCTGGCAAATGGTATCGGCCACCCCGTACTAGGT
AGTACATTTGCGCCTGAGTTGGAACAAGCCATTGAGAAGGTTCTGTCTTCGGCGCACAAGGCAGGCAAGAAGGCT
GGAATCTACTGTGGAAATGGAAAGCAGGCAAAGAAATATGCCGACTTGGGGTATGACTTTGTCAATGTTGTAACT
GACGTTGGTGCTCTGACTAGCTCGCTCGCAAGTGAGATGGAGATTGTCACTCAAAAAGCAGGCAGGACTGCCTCT
GGGCCTTACGGTAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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