Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2930.t1
Gene name
Locationscaffold_04:246468..248412
Strand-
Gene length (bp)1944
Transcript length (bp)1944
Coding sequence length (bp)1944
Protein length (aa) 648

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00749 tRNA-synt_1c tRNA synthetases class I (E and Q), catalytic domain 1.9E-102 94 410
PF03950 tRNA-synt_1c_C tRNA synthetases class I (E and Q), anti-codon binding domain 2.2E-31 414 589

GO

GO Term Description Terminal node
GO:0005737 cytoplasm Yes
GO:0004812 aminoacyl-tRNA ligase activity Yes
GO:0000166 nucleotide binding Yes
GO:0006418 tRNA aminoacylation for protein translation Yes
GO:0043039 tRNA aminoacylation Yes
GO:0005524 ATP binding Yes
GO:0043170 macromolecule metabolic process No
GO:0009987 cellular process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0043168 anion binding No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0032559 adenyl ribonucleotide binding No
GO:0044238 primary metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0003824 catalytic activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0032553 ribonucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0043038 amino acid activation No
GO:0044464 cell part No
GO:0006399 tRNA metabolic process No
GO:0019752 carboxylic acid metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008144 drug binding No
GO:0036094 small molecule binding No
GO:0044237 cellular metabolic process No
GO:0034660 ncRNA metabolic process No
GO:0016070 RNA metabolic process No
GO:0005488 binding No
GO:0044424 intracellular part No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016875 ligase activity, forming carbon-oxygen bonds No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0043167 ion binding No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0043436 oxoacid metabolic process No
GO:0008150 biological_process No
GO:0140098 catalytic activity, acting on RNA No
GO:0016874 ligase activity No
GO:0044281 small molecule metabolic process No
GO:0008152 metabolic process No
GO:0005575 cellular_component No
GO:0006082 organic acid metabolic process No
GO:0006520 cellular amino acid metabolic process No
GO:0030554 adenyl nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0017076 purine nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2930.t1
MDPAKPVDLPERPKEATEPTDPPKKSKSQEKKEAAAAKKAAAKLARQDQPKSKGEPKAPKAKDAPAPRDPEAMFK
VGFLHDVYQEKPLSETVPKIRTRFPPEPNGYLHIGHSKAIAINFGFAKYHGGECILRFDDTNPEGEEERYYNAIR
EIVTWLGFTPVRETNASDNFDRLYELAEDLIKRDGAYVCHCNKSEIKAQRGEIEGGQRGGERFSCSHRTRPIEES
LSEFRAMRDGKYKAGEAALRMKQDITDPNPQMWDLFAWRIMGSEDKQHHLTGGKWKIYPTYDFAHCLCDSIEEIS
HSLCTTEFELSRVSYEWLCDKLEVYRPNQREYGRLNITGTVLSKRKIIQLVKEGHVRDWDDPRLYTLIALRRRGV
PPGAILSFVNDLGVTKNTTNVQVTKFEQIVRQYLETTVPRLMVVLEPLKVIIDDLPEDHLELIDCPFSKDPAFGT
HNIPFTKTVYIERSDFRAVDSPDYFRLAPGKTVGLLKVPYPITATSFETDPATGEVTCVHAKYEKPAEGEAPTKP
KSFIHWIGESAAHNSPVRAEVRAFNSLFKSEDPSAHPAGFLADINPDSEEIFKDAMVETGIRDISRSAPWPKEEG
AAEPGEHKHSIRFQGMRVAYFAVDRESTDEKLVLNRIVTLKDTQGKN*
Coding >Pro_DTO377G3_2|g2930.t1
ATGGACCCCGCAAAGCCTGTCGACCTGCCTGAGAGGCCCAAGGAAGCCACCGAGCCTACAGATCCACCCAAGAAG
TCCAAGAGTCAGGAGAAGAAAGAGGCCGCAGCGGCTAAGAAGGCGGCGGCTAAGCTAGCAAGACAGGACCAGCCC
AAATCAAAGGGAGAGCCAAAGGCACCCAAGGCCAAGGATGCTCCCGCACCCCGTGACCCTGAAGCCATGTTCAAG
GTCGGCTTCCTGCACGACGTGTACCAGGAAAAGCCCCTTTCAGAGACCGTGCCCAAGATCCGCACGCGATTCCCA
CCCGAGCCCAACGGATACCTCCACATCGGCCACAGCAAGGCCATCGCGATCAACTTTGGATTTGCAAAGTACCAC
GGTGGGGAGTGCATTCTGCGCTTCGATGACACCAACCCAGAAGGCGAGGAGGAGCGGTACTACAATGCCATTCGG
GAGATTGTGACATGGCTCGGCTTTACACCTGTGCGTGAGACCAACGCCAGCGATAACTTCGATCGTCTCTATGAG
CTCGCAGAGGACCTCATCAAGCGTGATGGCGCATACGTCTGCCATTGCAACAAGTCCGAGATCAAGGCCCAGCGT
GGTGAGATCGAGGGCGGCCAGCGCGGCGGTGAACGCTTCTCATGCAGCCACCGTACACGACCCATCGAGGAGTCC
CTCTCCGAGTTCCGTGCCATGCGCGACGGAAAATACAAGGCGGGCGAGGCAGCTCTGCGCATGAAGCAGGATATC
ACAGACCCGAACCCGCAGATGTGGGATCTGTTCGCCTGGCGCATCATGGGCTCCGAGGACAAGCAGCACCACCTC
ACCGGCGGCAAGTGGAAGATTTACCCAACCTACGACTTCGCGCACTGTTTGTGTGATAGCATTGAGGAAATCTCG
CACTCACTGTGCACAACCGAGTTCGAGCTCTCTCGCGTCTCGTACGAGTGGCTCTGCGATAAGCTGGAGGTCTAC
CGCCCCAACCAGCGCGAGTACGGCCGTCTTAACATCACCGGCACTGTTCTCTCCAAGCGCAAGATCATCCAGCTT
GTCAAGGAAGGACATGTCCGCGACTGGGATGACCCACGTCTGTACACGCTCATCGCACTGCGCCGTCGCGGCGTG
CCCCCCGGTGCCATCCTCTCCTTCGTCAACGACCTCGGCGTAACAAAGAACACCACCAACGTCCAGGTCACCAAG
TTCGAGCAGATCGTCCGCCAGTACCTTGAGACCACCGTGCCACGTCTGATGGTCGTTCTCGAGCCGCTGAAGGTC
ATCATCGACGACCTCCCGGAAGACCACCTCGAGCTCATCGACTGCCCCTTCTCCAAAGACCCAGCCTTCGGCACC
CACAACATCCCCTTCACGAAGACCGTCTACATCGAGCGCTCGGACTTCCGCGCCGTTGACTCACCAGACTACTTC
CGCCTCGCCCCCGGCAAAACCGTCGGCCTCCTCAAAGTCCCCTACCCCATCACGGCGACCTCCTTCGAAACAGAC
CCTGCCACCGGCGAAGTCACCTGCGTGCACGCCAAATACGAGAAACCCGCCGAAGGCGAAGCCCCCACGAAACCC
AAGTCCTTCATCCACTGGATCGGCGAGTCGGCCGCGCACAACAGCCCCGTCCGCGCCGAAGTCCGCGCCTTCAAC
TCGCTCTTCAAGTCAGAGGATCCCTCTGCCCACCCGGCCGGTTTCCTCGCCGATATCAACCCGGACTCCGAGGAG
ATCTTCAAGGATGCCATGGTCGAGACTGGAATCCGGGATATCTCCCGCTCGGCGCCGTGGCCTAAGGAGGAGGGT
GCTGCGGAGCCGGGTGAGCACAAGCACTCGATTCGCTTCCAGGGAATGCGTGTTGCGTACTTTGCTGTCGATCGC
GAGTCGACTGATGAGAAGTTGGTGCTTAATCGCATTGTTACTCTCAAGGATACCCAGGGTAAGAATTGA
Transcript >Pro_DTO377G3_2|g2930.t1
ATGGACCCCGCAAAGCCTGTCGACCTGCCTGAGAGGCCCAAGGAAGCCACCGAGCCTACAGATCCACCCAAGAAG
TCCAAGAGTCAGGAGAAGAAAGAGGCCGCAGCGGCTAAGAAGGCGGCGGCTAAGCTAGCAAGACAGGACCAGCCC
AAATCAAAGGGAGAGCCAAAGGCACCCAAGGCCAAGGATGCTCCCGCACCCCGTGACCCTGAAGCCATGTTCAAG
GTCGGCTTCCTGCACGACGTGTACCAGGAAAAGCCCCTTTCAGAGACCGTGCCCAAGATCCGCACGCGATTCCCA
CCCGAGCCCAACGGATACCTCCACATCGGCCACAGCAAGGCCATCGCGATCAACTTTGGATTTGCAAAGTACCAC
GGTGGGGAGTGCATTCTGCGCTTCGATGACACCAACCCAGAAGGCGAGGAGGAGCGGTACTACAATGCCATTCGG
GAGATTGTGACATGGCTCGGCTTTACACCTGTGCGTGAGACCAACGCCAGCGATAACTTCGATCGTCTCTATGAG
CTCGCAGAGGACCTCATCAAGCGTGATGGCGCATACGTCTGCCATTGCAACAAGTCCGAGATCAAGGCCCAGCGT
GGTGAGATCGAGGGCGGCCAGCGCGGCGGTGAACGCTTCTCATGCAGCCACCGTACACGACCCATCGAGGAGTCC
CTCTCCGAGTTCCGTGCCATGCGCGACGGAAAATACAAGGCGGGCGAGGCAGCTCTGCGCATGAAGCAGGATATC
ACAGACCCGAACCCGCAGATGTGGGATCTGTTCGCCTGGCGCATCATGGGCTCCGAGGACAAGCAGCACCACCTC
ACCGGCGGCAAGTGGAAGATTTACCCAACCTACGACTTCGCGCACTGTTTGTGTGATAGCATTGAGGAAATCTCG
CACTCACTGTGCACAACCGAGTTCGAGCTCTCTCGCGTCTCGTACGAGTGGCTCTGCGATAAGCTGGAGGTCTAC
CGCCCCAACCAGCGCGAGTACGGCCGTCTTAACATCACCGGCACTGTTCTCTCCAAGCGCAAGATCATCCAGCTT
GTCAAGGAAGGACATGTCCGCGACTGGGATGACCCACGTCTGTACACGCTCATCGCACTGCGCCGTCGCGGCGTG
CCCCCCGGTGCCATCCTCTCCTTCGTCAACGACCTCGGCGTAACAAAGAACACCACCAACGTCCAGGTCACCAAG
TTCGAGCAGATCGTCCGCCAGTACCTTGAGACCACCGTGCCACGTCTGATGGTCGTTCTCGAGCCGCTGAAGGTC
ATCATCGACGACCTCCCGGAAGACCACCTCGAGCTCATCGACTGCCCCTTCTCCAAAGACCCAGCCTTCGGCACC
CACAACATCCCCTTCACGAAGACCGTCTACATCGAGCGCTCGGACTTCCGCGCCGTTGACTCACCAGACTACTTC
CGCCTCGCCCCCGGCAAAACCGTCGGCCTCCTCAAAGTCCCCTACCCCATCACGGCGACCTCCTTCGAAACAGAC
CCTGCCACCGGCGAAGTCACCTGCGTGCACGCCAAATACGAGAAACCCGCCGAAGGCGAAGCCCCCACGAAACCC
AAGTCCTTCATCCACTGGATCGGCGAGTCGGCCGCGCACAACAGCCCCGTCCGCGCCGAAGTCCGCGCCTTCAAC
TCGCTCTTCAAGTCAGAGGATCCCTCTGCCCACCCGGCCGGTTTCCTCGCCGATATCAACCCGGACTCCGAGGAG
ATCTTCAAGGATGCCATGGTCGAGACTGGAATCCGGGATATCTCCCGCTCGGCGCCGTGGCCTAAGGAGGAGGGT
GCTGCGGAGCCGGGTGAGCACAAGCACTCGATTCGCTTCCAGGGAATGCGTGTTGCGTACTTTGCTGTCGATCGC
GAGTCGACTGATGAGAAGTTGGTGCTTAATCGCATTGTTACTCTCAAGGATACCCAGGGTAAGAATTGA
Gene >Pro_DTO377G3_2|g2930.t1
ATGGACCCCGCAAAGCCTGTCGACCTGCCTGAGAGGCCCAAGGAAGCCACCGAGCCTACAGATCCACCCAAGAAG
TCCAAGAGTCAGGAGAAGAAAGAGGCCGCAGCGGCTAAGAAGGCGGCGGCTAAGCTAGCAAGACAGGACCAGCCC
AAATCAAAGGGAGAGCCAAAGGCACCCAAGGCCAAGGATGCTCCCGCACCCCGTGACCCTGAAGCCATGTTCAAG
GTCGGCTTCCTGCACGACGTGTACCAGGAAAAGCCCCTTTCAGAGACCGTGCCCAAGATCCGCACGCGATTCCCA
CCCGAGCCCAACGGATACCTCCACATCGGCCACAGCAAGGCCATCGCGATCAACTTTGGATTTGCAAAGTACCAC
GGTGGGGAGTGCATTCTGCGCTTCGATGACACCAACCCAGAAGGCGAGGAGGAGCGGTACTACAATGCCATTCGG
GAGATTGTGACATGGCTCGGCTTTACACCTGTGCGTGAGACCAACGCCAGCGATAACTTCGATCGTCTCTATGAG
CTCGCAGAGGACCTCATCAAGCGTGATGGCGCATACGTCTGCCATTGCAACAAGTCCGAGATCAAGGCCCAGCGT
GGTGAGATCGAGGGCGGCCAGCGCGGCGGTGAACGCTTCTCATGCAGCCACCGTACACGACCCATCGAGGAGTCC
CTCTCCGAGTTCCGTGCCATGCGCGACGGAAAATACAAGGCGGGCGAGGCAGCTCTGCGCATGAAGCAGGATATC
ACAGACCCGAACCCGCAGATGTGGGATCTGTTCGCCTGGCGCATCATGGGCTCCGAGGACAAGCAGCACCACCTC
ACCGGCGGCAAGTGGAAGATTTACCCAACCTACGACTTCGCGCACTGTTTGTGTGATAGCATTGAGGAAATCTCG
CACTCACTGTGCACAACCGAGTTCGAGCTCTCTCGCGTCTCGTACGAGTGGCTCTGCGATAAGCTGGAGGTCTAC
CGCCCCAACCAGCGCGAGTACGGCCGTCTTAACATCACCGGCACTGTTCTCTCCAAGCGCAAGATCATCCAGCTT
GTCAAGGAAGGACATGTCCGCGACTGGGATGACCCACGTCTGTACACGCTCATCGCACTGCGCCGTCGCGGCGTG
CCCCCCGGTGCCATCCTCTCCTTCGTCAACGACCTCGGCGTAACAAAGAACACCACCAACGTCCAGGTCACCAAG
TTCGAGCAGATCGTCCGCCAGTACCTTGAGACCACCGTGCCACGTCTGATGGTCGTTCTCGAGCCGCTGAAGGTC
ATCATCGACGACCTCCCGGAAGACCACCTCGAGCTCATCGACTGCCCCTTCTCCAAAGACCCAGCCTTCGGCACC
CACAACATCCCCTTCACGAAGACCGTCTACATCGAGCGCTCGGACTTCCGCGCCGTTGACTCACCAGACTACTTC
CGCCTCGCCCCCGGCAAAACCGTCGGCCTCCTCAAAGTCCCCTACCCCATCACGGCGACCTCCTTCGAAACAGAC
CCTGCCACCGGCGAAGTCACCTGCGTGCACGCCAAATACGAGAAACCCGCCGAAGGCGAAGCCCCCACGAAACCC
AAGTCCTTCATCCACTGGATCGGCGAGTCGGCCGCGCACAACAGCCCCGTCCGCGCCGAAGTCCGCGCCTTCAAC
TCGCTCTTCAAGTCAGAGGATCCCTCTGCCCACCCGGCCGGTTTCCTCGCCGATATCAACCCGGACTCCGAGGAG
ATCTTCAAGGATGCCATGGTCGAGACTGGAATCCGGGATATCTCCCGCTCGGCGCCGTGGCCTAAGGAGGAGGGT
GCTGCGGAGCCGGGTGAGCACAAGCACTCGATTCGCTTCCAGGGAATGCGTGTTGCGTACTTTGCTGTCGATCGC
GAGTCGACTGATGAGAAGTTGGTGCTTAATCGCATTGTTACTCTCAAGGATACCCAGGGTAAGAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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