Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2923.t1
Gene name
Locationscaffold_04:232551..234091
Strand+
Gene length (bp)1540
Transcript length (bp)1485
Coding sequence length (bp)1485
Protein length (aa) 495

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 4.8E-46 96 262
PF00271 Helicase_C Helicase conserved C-terminal domain 2.3E-28 301 407

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0003676 nucleic acid binding Yes
GO:0000166 nucleotide binding No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:0032555 purine ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2923.t1
MPVTKKRKVAHAVPAAPVEDSDVASNASSSSPQTNPDVEDSASDSSPQPTADDPNVEAASSETEPSTSSAPKTFK
ELGLIDSLCEACDKMGYKSPTPIQSESIPLALQGRDIIGLAETGSGKTAAFVLPILQALMEKPQPFFGLVMAPTR
ELAYQISLACESLGATINVRSTTLVGGMDMVPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKFLVMDEAD
RLLDMDFGPILDKILKVLPRERRTFLFSATLSSKVESLQRASLSNPARVSISTSKYATVETLQQTYILRPYKHKD
IYLVYLLHEFIGQSVIIFMRTVHETQRVAFLLRGLGFGAIPLHGQMSQSARLGALGKFRSKSREILVATDVAARG
LDIPSVDCVLNFDLPTDSKTYIHRVGRTARAGKSGTAISFVTQYDVEIWQRIEAAMGKELAEYPAPKDEAMVFAE
QVSASQRDAIQAMKHYDEKKGAKGKGKFSFKGKRSRDAMDQEEG*
Coding >Pro_DTO377G3_2|g2923.t1
ATGCCGGTTACCAAGAAGCGCAAGGTCGCACACGCAGTACCTGCTGCACCTGTTGAAGACAGCGACGTTGCATCA
AATGCAAGCTCTTCAAGCCCCCAAACCAACCCCGATGTTGAAGATAGCGCGAGCGATTCAAGTCCCCAACCCACT
GCTGATGACCCCAATGTCGAAGCTGCTTCCTCCGAGACTGAGCCCAGCACTTCCAGCGCTCCCAAAACATTCAAA
GAACTGGGTCTGATTGACTCGCTCTGCGAGGCCTGTGACAAAATGGGATACAAATCCCCTACACCAATCCAATCC
GAATCAATCCCGCTGGCACTTCAGGGTCGTGATATTATCGGATTGGCTGAAACAGGATCTGGAAAAACTGCTGCC
TTCGTTTTACCAATTCTTCAAGCACTCATGGAAAAGCCCCAGCCGTTCTTTGGGCTCGTAATGGCCCCAACCCGT
GAATTAGCGTACCAGATTTCACTAGCATGCGAGTCCCTTGGTGCAACAATCAACGTCAGATCCACCACGCTGGTT
GGTGGCATGGATATGGTTCCTCAGTCAATCGCTTTGGGAAAGAAACCTCACATCATCGTTGCCACGCCCGGCAGA
CTTCTCGATCACCTCGAGAATACTAAGGGCTTTTCTCTCCGCAACTTGAAATTCCTCGTCATGGACGAAGCAGAC
AGACTCCTCGATATGGATTTCGGCCCTATTCTCGATAAGATCCTGAAGGTCTTGCCGCGCGAGCGTAGAACCTTC
CTATTCTCCGCGACTCTGAGCTCAAAGGTTGAGTCTCTCCAACGAGCCTCACTGTCAAATCCGGCCCGCGTTTCG
ATCTCTACCAGCAAGTACGCTACCGTGGAAACTCTCCAGCAAACTTATATCCTTCGTCCTTATAAACACAAGGAC
ATCTACCTTGTATACCTCCTCCACGAATTCATCGGCCAGTCCGTCATTATCTTCATGCGCACCGTTCACGAGACA
CAGCGTGTTGCATTCCTGCTGCGCGGTCTAGGCTTCGGCGCAATCCCTCTCCATGGGCAGATGTCTCAATCTGCA
CGCCTGGGAGCACTGGGAAAATTCAGATCGAAAAGTCGCGAGATCCTGGTTGCCACCGATGTTGCTGCTCGTGGT
TTGGATATCCCCTCTGTGGACTGCGTTTTGAACTTTGACTTGCCAACCGACAGCAAGACCTATATCCATCGAGTA
GGCCGTACAGCACGTGCTGGAAAGTCTGGAACCGCCATCTCCTTTGTCACTCAATATGATGTGGAAATCTGGCAA
CGTATAGAGGCTGCGATGGGCAAAGAGTTGGCCGAGTACCCTGCGCCAAAAGATGAGGCTATGGTCTTTGCCGAA
CAAGTCAGTGCTTCACAGCGTGACGCCATTCAGGCGATGAAGCATTACGACGAGAAGAAAGGGGCCAAAGGCAAG
GGAAAGTTCTCGTTTAAGGGCAAGCGAAGTCGCGATGCCATGGACCAGGAAGAGGGCTAG
Transcript >Pro_DTO377G3_2|g2923.t1
ATGCCGGTTACCAAGAAGCGCAAGGTCGCACACGCAGTACCTGCTGCACCTGTTGAAGACAGCGACGTTGCATCA
AATGCAAGCTCTTCAAGCCCCCAAACCAACCCCGATGTTGAAGATAGCGCGAGCGATTCAAGTCCCCAACCCACT
GCTGATGACCCCAATGTCGAAGCTGCTTCCTCCGAGACTGAGCCCAGCACTTCCAGCGCTCCCAAAACATTCAAA
GAACTGGGTCTGATTGACTCGCTCTGCGAGGCCTGTGACAAAATGGGATACAAATCCCCTACACCAATCCAATCC
GAATCAATCCCGCTGGCACTTCAGGGTCGTGATATTATCGGATTGGCTGAAACAGGATCTGGAAAAACTGCTGCC
TTCGTTTTACCAATTCTTCAAGCACTCATGGAAAAGCCCCAGCCGTTCTTTGGGCTCGTAATGGCCCCAACCCGT
GAATTAGCGTACCAGATTTCACTAGCATGCGAGTCCCTTGGTGCAACAATCAACGTCAGATCCACCACGCTGGTT
GGTGGCATGGATATGGTTCCTCAGTCAATCGCTTTGGGAAAGAAACCTCACATCATCGTTGCCACGCCCGGCAGA
CTTCTCGATCACCTCGAGAATACTAAGGGCTTTTCTCTCCGCAACTTGAAATTCCTCGTCATGGACGAAGCAGAC
AGACTCCTCGATATGGATTTCGGCCCTATTCTCGATAAGATCCTGAAGGTCTTGCCGCGCGAGCGTAGAACCTTC
CTATTCTCCGCGACTCTGAGCTCAAAGGTTGAGTCTCTCCAACGAGCCTCACTGTCAAATCCGGCCCGCGTTTCG
ATCTCTACCAGCAAGTACGCTACCGTGGAAACTCTCCAGCAAACTTATATCCTTCGTCCTTATAAACACAAGGAC
ATCTACCTTGTATACCTCCTCCACGAATTCATCGGCCAGTCCGTCATTATCTTCATGCGCACCGTTCACGAGACA
CAGCGTGTTGCATTCCTGCTGCGCGGTCTAGGCTTCGGCGCAATCCCTCTCCATGGGCAGATGTCTCAATCTGCA
CGCCTGGGAGCACTGGGAAAATTCAGATCGAAAAGTCGCGAGATCCTGGTTGCCACCGATGTTGCTGCTCGTGGT
TTGGATATCCCCTCTGTGGACTGCGTTTTGAACTTTGACTTGCCAACCGACAGCAAGACCTATATCCATCGAGTA
GGCCGTACAGCACGTGCTGGAAAGTCTGGAACCGCCATCTCCTTTGTCACTCAATATGATGTGGAAATCTGGCAA
CGTATAGAGGCTGCGATGGGCAAAGAGTTGGCCGAGTACCCTGCGCCAAAAGATGAGGCTATGGTCTTTGCCGAA
CAAGTCAGTGCTTCACAGCGTGACGCCATTCAGGCGATGAAGCATTACGACGAGAAGAAAGGGGCCAAAGGCAAG
GGAAAGTTCTCGTTTAAGGGCAAGCGAAGTCGCGATGCCATGGACCAGGAAGAGGGCTAG
Gene >Pro_DTO377G3_2|g2923.t1
ATGCCGGTTACCAAGAAGCGCAAGGTCGCACACGCAGTACCTGCTGCACCTGTTGAAGACAGCGACGTTGCATCA
AATGCAAGCTCTTCAAGCCCCCAAACCAACCCCGATGTTGAAGATAGCGCGAGCGATTCAAGTCCCCAACCCACT
GCTGATGACCCCAATGTCGAAGCTGCTTCCTCCGAGACTGAGCCCAGCACTTCCAGCGCTCCCAAAACATTCAAA
GAACTGGGTCTGATTGACTCGCTCTGCGAGGCCTGTGACAAAATGGGATACAAATCCCCTACACCAATCCAATCC
GAATCAATCCCGCTGGCACTTCAGGGTCGTGATATTATCGGATTGGCTGAAACAGGATCTGGAAAAACTGCTGCC
TTCGTTTTACCAATTCTTCAAGGTTTGTGCATATTTGATGACATGTACCTTGTATACAATACTGACGAGTCTTCT
AGCACTCATGGAAAAGCCCCAGCCGTTCTTTGGGCTCGTAATGGCCCCAACCCGTGAATTAGCGTACCAGATTTC
ACTAGCATGCGAGTCCCTTGGTGCAACAATCAACGTCAGATCCACCACGCTGGTTGGTGGCATGGATATGGTTCC
TCAGTCAATCGCTTTGGGAAAGAAACCTCACATCATCGTTGCCACGCCCGGCAGACTTCTCGATCACCTCGAGAA
TACTAAGGGCTTTTCTCTCCGCAACTTGAAATTCCTCGTCATGGACGAAGCAGACAGACTCCTCGATATGGATTT
CGGCCCTATTCTCGATAAGATCCTGAAGGTCTTGCCGCGCGAGCGTAGAACCTTCCTATTCTCCGCGACTCTGAG
CTCAAAGGTTGAGTCTCTCCAACGAGCCTCACTGTCAAATCCGGCCCGCGTTTCGATCTCTACCAGCAAGTACGC
TACCGTGGAAACTCTCCAGCAAACTTATATCCTTCGTCCTTATAAACACAAGGACATCTACCTTGTATACCTCCT
CCACGAATTCATCGGCCAGTCCGTCATTATCTTCATGCGCACCGTTCACGAGACACAGCGTGTTGCATTCCTGCT
GCGCGGTCTAGGCTTCGGCGCAATCCCTCTCCATGGGCAGATGTCTCAATCTGCACGCCTGGGAGCACTGGGAAA
ATTCAGATCGAAAAGTCGCGAGATCCTGGTTGCCACCGATGTTGCTGCTCGTGGTTTGGATATCCCCTCTGTGGA
CTGCGTTTTGAACTTTGACTTGCCAACCGACAGCAAGACCTATATCCATCGAGTAGGCCGTACAGCACGTGCTGG
AAAGTCTGGAACCGCCATCTCCTTTGTCACTCAATATGATGTGGAAATCTGGCAACGTATAGAGGCTGCGATGGG
CAAAGAGTTGGCCGAGTACCCTGCGCCAAAAGATGAGGCTATGGTCTTTGCCGAACAAGTCAGTGCTTCACAGCG
TGACGCCATTCAGGCGATGAAGCATTACGACGAGAAGAAAGGGGCCAAAGGCAAGGGAAAGTTCTCGTTTAAGGG
CAAGCGAAGTCGCGATGCCATGGACCAGGAAGAGGGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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