Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2921.t1
Gene name
Locationscaffold_04:229528..230343
Strand+
Gene length (bp)815
Transcript length (bp)702
Coding sequence length (bp)702
Protein length (aa) 234

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00677 Lum_binding Lumazine binding domain 6.2E-22 3 93
PF00677 Lum_binding Lumazine binding domain 6.4E-19 106 194

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 15 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2921.t1
MFTGLVETIGTVTALEPIDTSSSGGGGTSLTISDCEEILTDAHLGDSIAVNGTCLTVTAFDKTWFKVGCAPETLR
RTNLGSLQTNSHVNLERAVSADTRMGGHFVQGHVDTVAEILSVTPDGNSLVFRLQPRERDILRYVVEKGYVTLDG
ASLTVTKVVDGQDGYWEVMLIAYTQDKVVTAAKKPGDFVNVEIDIVGKYVEKSVQGYFAGTSGGDFAILEKMVNR
IVDERLKK*
Coding >Pro_DTO377G3_2|g2921.t1
ATGTTTACAGGTCTTGTCGAAACGATTGGGACTGTCACGGCCTTGGAGCCTATTGACACCTCATCGAGCGGGGGC
GGGGGAACGTCACTCACCATCTCCGACTGTGAGGAGATCCTCACCGACGCACACCTGGGCGATAGTATCGCAGTG
AATGGAACATGTCTTACGGTCACTGCATTCGATAAGACCTGGTTCAAGGTTGGCTGTGCGCCAGAGACACTGCGA
CGCACAAACCTGGGTTCTTTGCAGACGAATTCCCACGTGAACCTCGAGCGCGCCGTTTCAGCCGATACCCGGATG
GGAGGACATTTTGTGCAAGGTCATGTCGATACCGTTGCGGAGATTCTGTCTGTTACGCCGGATGGAAACTCGTTG
GTGTTCCGACTGCAGCCGCGCGAGAGAGATATTCTGCGCTATGTTGTGGAAAAGGGCTATGTGACCCTTGATGGT
GCTAGCTTGACTGTCACCAAGGTCGTCGATGGGCAGGATGGATACTGGGAGGTTATGCTTATTGCCTATACACAG
GATAAGGTGGTCACTGCGGCGAAAAAGCCCGGTGACTTTGTTAATGTTGAGATTGATATCGTGGGCAAGTATGTT
GAGAAGAGCGTGCAGGGATACTTTGCTGGAACCTCTGGTGGAGATTTCGCTATCTTGGAGAAGATGGTGAACAGG
ATCGTCGATGAAAGACTCAAGAAATAG
Transcript >Pro_DTO377G3_2|g2921.t1
ATGTTTACAGGTCTTGTCGAAACGATTGGGACTGTCACGGCCTTGGAGCCTATTGACACCTCATCGAGCGGGGGC
GGGGGAACGTCACTCACCATCTCCGACTGTGAGGAGATCCTCACCGACGCACACCTGGGCGATAGTATCGCAGTG
AATGGAACATGTCTTACGGTCACTGCATTCGATAAGACCTGGTTCAAGGTTGGCTGTGCGCCAGAGACACTGCGA
CGCACAAACCTGGGTTCTTTGCAGACGAATTCCCACGTGAACCTCGAGCGCGCCGTTTCAGCCGATACCCGGATG
GGAGGACATTTTGTGCAAGGTCATGTCGATACCGTTGCGGAGATTCTGTCTGTTACGCCGGATGGAAACTCGTTG
GTGTTCCGACTGCAGCCGCGCGAGAGAGATATTCTGCGCTATGTTGTGGAAAAGGGCTATGTGACCCTTGATGGT
GCTAGCTTGACTGTCACCAAGGTCGTCGATGGGCAGGATGGATACTGGGAGGTTATGCTTATTGCCTATACACAG
GATAAGGTGGTCACTGCGGCGAAAAAGCCCGGTGACTTTGTTAATGTTGAGATTGATATCGTGGGCAAGTATGTT
GAGAAGAGCGTGCAGGGATACTTTGCTGGAACCTCTGGTGGAGATTTCGCTATCTTGGAGAAGATGGTGAACAGG
ATCGTCGATGAAAGACTCAAGAAATAG
Gene >Pro_DTO377G3_2|g2921.t1
ATGTTTACAGGTCTTGTCGAAACGATTGGGAGTGAGGATATCTTTCTCTTTGTAACGTGAGTCAATCGCTAACGT
GGTTTTACTAGCTGTCACGGCCTTGGAGCCTATTGACACCTCATCGAGCGGGGGCGGGGGAACGTCACTCACCAT
CTCCGACTGTGAGGAGATCCTCACCGACGCACACCTGGGCGATAGTATCGCAGTGAATGGTATTTTACTCTTTCG
TTGTCTATAACACATGGGATATTGTCTAAAAGTGGGCTCAAGGAACATGTCTTACGGTCACTGCATTCGATAAGA
CCTGGTTCAAGGTTGGCTGTGCGCCAGAGACACTGCGACGCACAAACCTGGGTTCTTTGCAGACGAATTCCCACG
TGAACCTCGAGCGCGCCGTTTCAGCCGATACCCGGATGGGAGGACATTTTGTGCAAGGTCATGTCGATACCGTTG
CGGAGATTCTGTCTGTTACGCCGGATGGAAACTCGTTGGTGTTCCGACTGCAGCCGCGCGAGAGAGATATTCTGC
GCTATGTTGTGGAAAAGGGCTATGTGACCCTTGATGGTGCTAGCTTGACTGTCACCAAGGTCGTCGATGGGCAGG
ATGGATACTGGGAGGTTATGCTTATTGCCTATACACAGGATAAGGTGGTCACTGCGGCGAAAAAGCCCGGTGACT
TTGTTAATGTTGAGATTGATATCGTGGGCAAGTATGTTGAGAAGAGCGTGCAGGGATACTTTGCTGGAACCTCTG
GTGGAGATTTCGCTATCTTGGAGAAGATGGTGAACAGGATCGTCGATGAAAGACTCAAGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail